RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 POGKQ9P215 609 aa12.11□□□□□ -0.47
GTF3C2-202ENST00000359541 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
GTF3C2-202ENST00000359541 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
GTF3C2-202ENST00000359541 DIP2CQ9Y2E4 1556 aa12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 SRPK2P78362 688 aaKnown RBP12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 PPLO60437 1756 aa12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
GTF3C2-202ENST00000359541 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 IDI1Q13907 227 aa12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 RUNDC1Q96C34 613 aa12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 TERF2IPQ9NYB0 399 aa12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
GTF3C2-202ENST00000359541 ZFYVE9O95405 1425 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 CFAP65Q6ZU64 1925 aaKnown RBP12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 ANKRD36BQ8N2N9 1353 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 FAM69CQ0P6D2 419 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 IPO9Q96P70 1041 aaKnown RBP12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 STK26Q9P289 416 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 QRICH2Q9H0J4 1663 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
GTF3C2-202ENST00000359541 ADGRB1O14514 1584 aa12.07□□□□□ -0.48
GTF3C2-202ENST00000359541 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
GTF3C2-202ENST00000359541 GLI2P10070 1586 aa12.06□□□□□ -0.48
GTF3C2-202ENST00000359541 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
GTF3C2-202ENST00000359541 PDE4AP27815 886 aa12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 MTHFSP49914 203 aa12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 NEFMP07197 916 aa12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
GTF3C2-202ENST00000359541 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 MYH16Q9H6N6 1097 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 CABP2Q9NPB3 220 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
GTF3C2-202ENST00000359541 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 WDR63Q8IWG1 891 aa12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 RICTORQ6R327 1708 aa12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
GTF3C2-202ENST00000359541 HDGFP51858 240 aaKnown RBP12.02□□□□□ -0.48
GTF3C2-202ENST00000359541 AAMPQ13685 434 aa12.02□□□□□ -0.48
GTF3C2-202ENST00000359541 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.48
GTF3C2-202ENST00000359541 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
GTF3C2-202ENST00000359541 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
GTF3C2-202ENST00000359541 MINK1Q8N4C8 1332 aaPredicted RBP12.01□□□□□ -0.49
GTF3C2-202ENST00000359541 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
GTF3C2-202ENST00000359541 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
GTF3C2-202ENST00000359541 U2SURPO15042 1029 aaKnown RBP12□□□□□ -0.49
GTF3C2-202ENST00000359541 CCDC27Q2M243 656 aa12□□□□□ -0.49
GTF3C2-202ENST00000359541 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
GTF3C2-202ENST00000359541 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.99□□□□□ -0.49
GTF3C2-202ENST00000359541 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
GTF3C2-202ENST00000359541 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
GTF3C2-202ENST00000359541 TULP4Q9NRJ4 1543 aa11.98□□□□□ -0.49
GTF3C2-202ENST00000359541 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
GTF3C2-202ENST00000359541 ARHGEF28Q8N1W1 1705 aaKnown RBP11.98□□□□□ -0.49
GTF3C2-202ENST00000359541 PREX1Q8TCU6 1659 aa11.98□□□□□ -0.49
GTF3C2-202ENST00000359541 SIGLEC1Q9BZZ2 1709 aa11.98□□□□□ -0.49
GTF3C2-202ENST00000359541 BCAR3O75815 825 aa11.97□□□□□ -0.49
GTF3C2-202ENST00000359541 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
GTF3C2-202ENST00000359541 A0A1W2PP64 1363 aa11.97□□□□□ -0.49
GTF3C2-202ENST00000359541 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
GTF3C2-202ENST00000359541 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
GTF3C2-202ENST00000359541 MLECQ14165 292 aa11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 AGLP35573 1532 aa11.96□□□□□ -0.49
GTF3C2-202ENST00000359541 CDK19Q9BWU1 502 aa11.96□□□□□ -0.5
GTF3C2-202ENST00000359541 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
GTF3C2-202ENST00000359541 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
GTF3C2-202ENST00000359541 TMEM131LA2VDJ0 1609 aa11.95□□□□□ -0.5
GTF3C2-202ENST00000359541 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
GTF3C2-202ENST00000359541 RGS3P49796 1198 aa11.95□□□□□ -0.5
GTF3C2-202ENST00000359541 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-202ENST00000359541 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-202ENST00000359541 REREQ9P2R6 1566 aa11.94□□□□□ -0.5
GTF3C2-202ENST00000359541 ARXQ96QS3 562 aa11.94□□□□□ -0.5
GTF3C2-202ENST00000359541 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 NBR1Q14596 966 aa11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
GTF3C2-202ENST00000359541 DIP2BQ9P265 1576 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms