RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 AFAP1Q8N556 730 aa19.78■□□□□ 0.76
LMBR1-202ENST00000359422 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
LMBR1-202ENST00000359422 HOMER1Q86YM7 354 aa19.78■□□□□ 0.76
LMBR1-202ENST00000359422 RALYLQ86SE5 291 aaKnown RBP19.78■□□□□ 0.76
LMBR1-202ENST00000359422 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
LMBR1-202ENST00000359422 FOSBP53539 338 aa19.77■□□□□ 0.76
LMBR1-202ENST00000359422 CCDC73Q6ZRK6 1079 aa19.77■□□□□ 0.76
LMBR1-202ENST00000359422 ERICH2A1L162 156 aa19.77■□□□□ 0.75
LMBR1-202ENST00000359422 CDC45O75419 566 aa19.76■□□□□ 0.75
LMBR1-202ENST00000359422 WASHC4Q2M389 1173 aa19.76■□□□□ 0.75
LMBR1-202ENST00000359422 SASS6Q6UVJ0 657 aa19.76■□□□□ 0.75
LMBR1-202ENST00000359422 FBXW7Q969H0 707 aa19.76■□□□□ 0.75
LMBR1-202ENST00000359422 HOOK1Q9UJC3 728 aaKnown RBP19.76■□□□□ 0.75
LMBR1-202ENST00000359422 CCDC70Q6NSX1 233 aa19.75■□□□□ 0.75
LMBR1-202ENST00000359422 CLASRPQ8N2M8 674 aaKnown RBP19.75■□□□□ 0.75
LMBR1-202ENST00000359422 TCEAL9Q9UHQ7 104 aa19.75■□□□□ 0.75
LMBR1-202ENST00000359422 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
LMBR1-202ENST00000359422 SAFBQ15424 915 aaKnown RBP eCLIP19.75■□□□□ 0.75
LMBR1-202ENST00000359422 NFKBIBQ15653 356 aa19.75■□□□□ 0.75
LMBR1-202ENST00000359422 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
LMBR1-202ENST00000359422 FGD5Q6ZNL6 1462 aa19.74■□□□□ 0.75
LMBR1-202ENST00000359422 MIA2Q96PC5 1412 aa19.74■□□□□ 0.75
LMBR1-202ENST00000359422 GPS2Q13227 327 aa19.74■□□□□ 0.75
LMBR1-202ENST00000359422 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
LMBR1-202ENST00000359422 ATF3P18847 181 aa19.73■□□□□ 0.75
LMBR1-202ENST00000359422 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
LMBR1-202ENST00000359422 GNAI3P08754 354 aa19.73■□□□□ 0.75
LMBR1-202ENST00000359422 CTDP1Q9Y5B0 961 aaPredicted RBP19.73■□□□□ 0.75
LMBR1-202ENST00000359422 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
LMBR1-202ENST00000359422 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
LMBR1-202ENST00000359422 FAM13BQ9NYF5 915 aa19.72■□□□□ 0.75
LMBR1-202ENST00000359422 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
LMBR1-202ENST00000359422 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
LMBR1-202ENST00000359422 SDF4Q9BRK5 362 aa19.7■□□□□ 0.74
LMBR1-202ENST00000359422 FAM43AQ8N2R8 423 aa19.7■□□□□ 0.74
LMBR1-202ENST00000359422 FSD1Q9BTV5 496 aa19.7■□□□□ 0.74
LMBR1-202ENST00000359422 NEK4P51957 841 aa19.69■□□□□ 0.74
LMBR1-202ENST00000359422 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
LMBR1-202ENST00000359422 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
LMBR1-202ENST00000359422 ABTB2Q8N961 1025 aa19.68■□□□□ 0.74
LMBR1-202ENST00000359422 CCDC30Q5VVM6 783 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 RBM33Q96EV2 1170 aaKnown RBP19.67■□□□□ 0.74
LMBR1-202ENST00000359422 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 IFT57Q9NWB7 429 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 TWISTNBQ3B726 338 aaPredicted RBP19.67■□□□□ 0.74
LMBR1-202ENST00000359422 GAS2L2Q8NHY3 880 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 PDZRN3Q9UPQ7 1066 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 SAMD1Q6SPF0 538 aaPredicted RBP19.67■□□□□ 0.74
LMBR1-202ENST00000359422 CNTROBQ8N137 903 aa19.67■□□□□ 0.74
LMBR1-202ENST00000359422 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
LMBR1-202ENST00000359422 FYB1O15117 783 aa19.66■□□□□ 0.74
LMBR1-202ENST00000359422 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
LMBR1-202ENST00000359422 PSMA5P28066 241 aa19.65■□□□□ 0.74
LMBR1-202ENST00000359422 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.74
LMBR1-202ENST00000359422 C1orf115Q9H7X2 142 aa19.64■□□□□ 0.74
LMBR1-202ENST00000359422 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
LMBR1-202ENST00000359422 CCDC43Q96MW1 224 aaKnown RBP19.64■□□□□ 0.73
LMBR1-202ENST00000359422 MRE11P49959 708 aa19.63■□□□□ 0.73
LMBR1-202ENST00000359422 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.63■□□□□ 0.73
LMBR1-202ENST00000359422 PRAM1Q96QH2 718 aa19.63■□□□□ 0.73
LMBR1-202ENST00000359422 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
LMBR1-202ENST00000359422 NASPP49321 788 aaPredicted RBP19.63■□□□□ 0.73
LMBR1-202ENST00000359422 ATP2B1P20020 1258 aa19.63■□□□□ 0.73
LMBR1-202ENST00000359422 TXNDC2Q86VQ3 553 aa19.63■□□□□ 0.73
LMBR1-202ENST00000359422 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.735e-8■■■■■ 28.3
LMBR1-202ENST00000359422 FAM177BA6PVY3 158 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 TRAK2O60296 914 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 BCAR3O75815 825 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 ZNF771Q7L3S4 317 aaPredicted RBP19.62■□□□□ 0.73
LMBR1-202ENST00000359422 CUX1P39880 1505 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 MTMR7Q9Y216 660 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
LMBR1-202ENST00000359422 MNS1Q8NEH6 495 aa19.61■□□□□ 0.73
LMBR1-202ENST00000359422 DNAJC2Q99543 621 aaKnown RBP19.61■□□□□ 0.73
LMBR1-202ENST00000359422 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
LMBR1-202ENST00000359422 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
LMBR1-202ENST00000359422 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 KDM4AO75164 1064 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
LMBR1-202ENST00000359422 KIF21BO75037 1637 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 XBP1P17861 261 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 NAP1L1P55209 391 aaKnown RBP19.59■□□□□ 0.73
LMBR1-202ENST00000359422 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 GPRASP1Q5JY77 1395 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 PDCP20941 246 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 GNAI2P04899 355 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 NAT10Q9H0A0 1025 aaKnown RBP19.59■□□□□ 0.73
LMBR1-202ENST00000359422 NOB1Q9ULX3 412 aaKnown RBP19.59■□□□□ 0.73
LMBR1-202ENST00000359422 GCC1Q96CN9 775 aa19.59■□□□□ 0.73
LMBR1-202ENST00000359422 MBD3O95983 291 aa19.58■□□□□ 0.73
LMBR1-202ENST00000359422 OFD1O75665 1012 aa19.58■□□□□ 0.72
LMBR1-202ENST00000359422 MCM2P49736 904 aa19.58■□□□□ 0.72
LMBR1-202ENST00000359422 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
LMBR1-202ENST00000359422 BRMS1Q9HCU9 246 aa19.58■□□□□ 0.72
LMBR1-202ENST00000359422 CASKIN1Q8WXD9 1431 aa19.58■□□□□ 0.72
LMBR1-202ENST00000359422 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms