RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
PTPA-206ENST00000358994 MADDQ8WXG6 1647 aa22.79■■□□□ 1.24
PTPA-206ENST00000358994 ATP10BO94823 1461 aa22.78■■□□□ 1.24
PTPA-206ENST00000358994 MVPQ14764 893 aaKnown RBP22.77■■□□□ 1.24
PTPA-206ENST00000358994 SMC5Q8IY18 1101 aa22.77■■□□□ 1.24
PTPA-206ENST00000358994 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
PTPA-206ENST00000358994 GBP4Q96PP9 640 aa22.76■■□□□ 1.23
PTPA-206ENST00000358994 PPP1R9BQ96SB3 815 aa22.76■■□□□ 1.23
PTPA-206ENST00000358994 CCDC173Q0VFZ6 552 aa22.76■■□□□ 1.23
PTPA-206ENST00000358994 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
PTPA-206ENST00000358994 SKOR2Q2VWA4 1001 aaPredicted RBP22.76■■□□□ 1.23
PTPA-206ENST00000358994 OFD1O75665 1012 aa22.75■■□□□ 1.23
PTPA-206ENST00000358994 CALD1Q05682 793 aaKnown RBP22.75■■□□□ 1.23
PTPA-206ENST00000358994 SNX21Q969T3 373 aa22.75■■□□□ 1.23
PTPA-206ENST00000358994 ZSCAN30Q86W11 494 aa22.75■■□□□ 1.23
PTPA-206ENST00000358994 RIPK4P57078 832 aa22.75■■□□□ 1.23
PTPA-206ENST00000358994 CARD14Q9BXL6 1004 aa22.75■■□□□ 1.23
PTPA-206ENST00000358994 CIZ1Q9ULV3 898 aaPredicted RBP22.75■■□□□ 1.23
PTPA-206ENST00000358994 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
PTPA-206ENST00000358994 RBM25P49756 843 aaKnown RBP22.74■■□□□ 1.23
PTPA-206ENST00000358994 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
PTPA-206ENST00000358994 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
PTPA-206ENST00000358994 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
PTPA-206ENST00000358994 CDC42BPBQ9Y5S2 1711 aa22.73■■□□□ 1.23
PTPA-206ENST00000358994 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
PTPA-206ENST00000358994 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
PTPA-206ENST00000358994 RSPH4AQ5TD94 716 aa22.72■■□□□ 1.23
PTPA-206ENST00000358994 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
PTPA-206ENST00000358994 PRDM4Q9UKN5 801 aa22.72■■□□□ 1.23
PTPA-206ENST00000358994 CEP152O94986 1710 aa22.72■■□□□ 1.23
PTPA-206ENST00000358994 NASPP49321 788 aaPredicted RBP22.72■■□□□ 1.23
PTPA-206ENST00000358994 RBM10P98175 930 aaKnown RBP22.72■■□□□ 1.23
PTPA-206ENST00000358994 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
PTPA-206ENST00000358994 WDR63Q8IWG1 891 aa22.7■■□□□ 1.22
PTPA-206ENST00000358994 RUNDC1Q96C34 613 aa22.7■■□□□ 1.22
PTPA-206ENST00000358994 SHPRHQ149N8 1683 aa22.7■■□□□ 1.22
PTPA-206ENST00000358994 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
PTPA-206ENST00000358994 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
PTPA-206ENST00000358994 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
PTPA-206ENST00000358994 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
PTPA-206ENST00000358994 HDAC1Q13547 482 aaPredicted RBP22.68■■□□□ 1.22
PTPA-206ENST00000358994 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.68■■□□□ 1.22
PTPA-206ENST00000358994 DZIP1LQ8IYY4 767 aaKnown RBP22.68■■□□□ 1.22
PTPA-206ENST00000358994 PTMSP20962 102 aa22.67■■□□□ 1.22
PTPA-206ENST00000358994 TERF1P54274 439 aa22.67■■□□□ 1.22
PTPA-206ENST00000358994 ZKSCAN2Q63HK3 967 aa22.67■■□□□ 1.22
PTPA-206ENST00000358994 FTSJ3Q8IY81 847 aaKnown RBP22.67■■□□□ 1.22
PTPA-206ENST00000358994 SYCP2Q9BX26 1530 aa22.67■■□□□ 1.22
PTPA-206ENST00000358994 MSNP26038 577 aaKnown RBP22.66■■□□□ 1.22
PTPA-206ENST00000358994 FOXD4L1Q9NU39 408 aa22.66■■□□□ 1.22
PTPA-206ENST00000358994 MAST1Q9Y2H9 1570 aa22.66■■□□□ 1.22
PTPA-206ENST00000358994 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
PTPA-206ENST00000358994 ERCC6L2Q5T890 1561 aa22.65■■□□□ 1.22
PTPA-206ENST00000358994 SPHKAPQ2M3C7 1700 aa22.65■■□□□ 1.22
PTPA-206ENST00000358994 CD2BP2O95400 341 aaKnown RBP22.65■■□□□ 1.22
PTPA-206ENST00000358994 KIF2CQ99661 725 aa22.65■■□□□ 1.22
PTPA-206ENST00000358994 KANK1Q14678 1352 aa22.64■■□□□ 1.22
PTPA-206ENST00000358994 TTC37Q6PGP7 1564 aa22.64■■□□□ 1.21
PTPA-206ENST00000358994 ANP32BQ92688 251 aaKnown RBP22.63■■□□□ 1.21
PTPA-206ENST00000358994 FAM13BQ9NYF5 915 aa22.63■■□□□ 1.21
PTPA-206ENST00000358994 ERVK-7P63135 1459 aa22.63■■□□□ 1.21
PTPA-206ENST00000358994 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
PTPA-206ENST00000358994 SSFA2P28290 1259 aa22.62■■□□□ 1.21
PTPA-206ENST00000358994 PODXL2Q9NZ53 605 aa22.62■■□□□ 1.21
PTPA-206ENST00000358994 R3HCC1Q9Y3T6 440 aaKnown RBP22.62■■□□□ 1.21
PTPA-206ENST00000358994 IBTKQ9P2D0 1353 aaPredicted RBP22.62■■□□□ 1.21
PTPA-206ENST00000358994 CCDC27Q2M243 656 aa22.61■■□□□ 1.21
PTPA-206ENST00000358994 KLHL40Q2TBA0 621 aa22.6■■□□□ 1.21
PTPA-206ENST00000358994 TRIM27P14373 513 aa22.6■■□□□ 1.21
PTPA-206ENST00000358994 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
PTPA-206ENST00000358994 MAP7D2Q96T17 732 aa22.59■■□□□ 1.21
PTPA-206ENST00000358994 DDX49Q9Y6V7 483 aaKnown RBP22.59■■□□□ 1.21
PTPA-206ENST00000358994 ITPRIPQ8IWB1 547 aa22.58■■□□□ 1.21
PTPA-206ENST00000358994 CLEC17AQ6ZS10 378 aa22.58■■□□□ 1.2
PTPA-206ENST00000358994 K7ELQ4 463 aaPredicted RBP22.57■■□□□ 1.2
PTPA-206ENST00000358994 DDX19BQ9UMR2 479 aa22.57■■□□□ 1.2
PTPA-206ENST00000358994 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.57■■□□□ 1.2
PTPA-206ENST00000358994 GOLGA6L22H0YM25 854 aa22.56■■□□□ 1.2
PTPA-206ENST00000358994 AK9Q5TCS8 1911 aa22.56■■□□□ 1.2
PTPA-206ENST00000358994 BAG4O95429 457 aaKnown RBP22.56■■□□□ 1.2
PTPA-206ENST00000358994 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
PTPA-206ENST00000358994 GAS2L2Q8NHY3 880 aa22.56■■□□□ 1.2
PTPA-206ENST00000358994 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
PTPA-206ENST00000358994 NOL7Q9UMY1 257 aaKnown RBP22.56■■□□□ 1.2
PTPA-206ENST00000358994 ZNF500O60304 480 aaPredicted RBP22.55■■□□□ 1.2
PTPA-206ENST00000358994 HS1BP3Q53T59 392 aa22.55■■□□□ 1.2
PTPA-206ENST00000358994 RBM42Q9BTD8 480 aaKnown RBP22.55■■□□□ 1.2
PTPA-206ENST00000358994 LNPKQ9C0E8 428 aa22.55■■□□□ 1.2
PTPA-206ENST00000358994 NUCB1Q02818 461 aa22.55■■□□□ 1.2
PTPA-206ENST00000358994 ZNF445P59923 1031 aa22.54■■□□□ 1.2
PTPA-206ENST00000358994 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
PTPA-206ENST00000358994 TSR2Q969E8 191 aaKnown RBP22.54■■□□□ 1.2
PTPA-206ENST00000358994 STAC3Q96MF2 364 aa22.54■■□□□ 1.2
PTPA-206ENST00000358994 UQCRHLA0A096LP55 91 aa22.54■■□□□ 1.2
PTPA-206ENST00000358994 UQCRHP07919 91 aa22.54■■□□□ 1.2
PTPA-206ENST00000358994 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
PTPA-206ENST00000358994 SSH1Q8WYL5 1049 aa22.52■■□□□ 1.2
PTPA-206ENST00000358994 PDLIM2Q96JY6 352 aa22.52■■□□□ 1.2
PTPA-206ENST00000358994 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
PTPA-206ENST00000358994 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms