RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 A2MP01023 1474 aa15.34■□□□□ 0.05
COL20A1-201ENST00000358894 LRPPRCP42704 1394 aaKnown RBP15.34■□□□□ 0.05
COL20A1-201ENST00000358894 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
COL20A1-201ENST00000358894 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
COL20A1-201ENST00000358894 NGDNQ8NEJ9 315 aaKnown RBP15.34■□□□□ 0.05
COL20A1-201ENST00000358894 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.05
COL20A1-201ENST00000358894 NOS1P29475 1434 aa15.33■□□□□ 0.04
COL20A1-201ENST00000358894 FRAT2O75474 233 aaPredicted RBP15.33■□□□□ 0.04
COL20A1-201ENST00000358894 L1TD1Q5T7N2 865 aaKnown RBP15.33■□□□□ 0.04
COL20A1-201ENST00000358894 DUOX2Q9NRD8 1548 aa15.32■□□□□ 0.04
COL20A1-201ENST00000358894 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
COL20A1-201ENST00000358894 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-201ENST00000358894 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
COL20A1-201ENST00000358894 AMPHP49418 695 aa15.31■□□□□ 0.04
COL20A1-201ENST00000358894 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-201ENST00000358894 KIF16BQ96L93 1317 aa15.31■□□□□ 0.04
COL20A1-201ENST00000358894 CDK19Q9BWU1 502 aa15.31■□□□□ 0.04
COL20A1-201ENST00000358894 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
COL20A1-201ENST00000358894 NKTRP30414 1462 aaKnown RBP15.3■□□□□ 0.04
COL20A1-201ENST00000358894 PTMAP06454 111 aaKnown RBP15.29■□□□□ 0.04
COL20A1-201ENST00000358894 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
COL20A1-201ENST00000358894 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
COL20A1-201ENST00000358894 IDI1Q13907 227 aa15.29■□□□□ 0.04
COL20A1-201ENST00000358894 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
COL20A1-201ENST00000358894 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-201ENST00000358894 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
COL20A1-201ENST00000358894 CD109Q6YHK3 1445 aa15.29■□□□□ 0.04
COL20A1-201ENST00000358894 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 ABCC10Q5T3U5 1492 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 GBP4Q96PP9 640 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 CARD14Q9BXL6 1004 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 RPGRIP1LQ68CZ1 1315 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 MBD5Q9P267 1494 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-201ENST00000358894 RNF123Q5XPI4 1314 aa15.28■□□□□ 0.04
COL20A1-201ENST00000358894 MVPQ14764 893 aaKnown RBP15.27■□□□□ 0.03
COL20A1-201ENST00000358894 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.03
COL20A1-201ENST00000358894 IGHDP01880 384 aa15.26■□□□□ 0.03
COL20A1-201ENST00000358894 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
COL20A1-201ENST00000358894 GNAI1P63096 354 aa15.26■□□□□ 0.03
COL20A1-201ENST00000358894 EID1Q9Y6B2 187 aa15.26■□□□□ 0.03
COL20A1-201ENST00000358894 AAMPQ13685 434 aa15.26■□□□□ 0.03
COL20A1-201ENST00000358894 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
COL20A1-201ENST00000358894 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
COL20A1-201ENST00000358894 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-201ENST00000358894 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 LRRIQ1Q96JM4 1722 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-201ENST00000358894 WAPLQ7Z5K2 1190 aa15.25■□□□□ 0.03
COL20A1-201ENST00000358894 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
COL20A1-201ENST00000358894 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
COL20A1-201ENST00000358894 HMMRO75330 724 aa15.24■□□□□ 0.03
COL20A1-201ENST00000358894 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
COL20A1-201ENST00000358894 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
COL20A1-201ENST00000358894 KDM5CP41229 1560 aa15.23■□□□□ 0.03
COL20A1-201ENST00000358894 FBLN1P23142 703 aa15.22■□□□□ 0.03
COL20A1-201ENST00000358894 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
COL20A1-201ENST00000358894 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
COL20A1-201ENST00000358894 KCNJ4P48050 445 aa15.21■□□□□ 0.03
COL20A1-201ENST00000358894 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
COL20A1-201ENST00000358894 TNNQ9UQP3 1299 aa15.21■□□□□ 0.03
COL20A1-201ENST00000358894 MSNP26038 577 aaKnown RBP15.21■□□□□ 0.03
COL20A1-201ENST00000358894 TMEM57Q8N5G2 664 aa15.21■□□□□ 0.03
COL20A1-201ENST00000358894 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
COL20A1-201ENST00000358894 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
COL20A1-201ENST00000358894 MCCP23508 829 aa15.21■□□□□ 0.02
COL20A1-201ENST00000358894 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.02
COL20A1-201ENST00000358894 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.02
COL20A1-201ENST00000358894 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-201ENST00000358894 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
COL20A1-201ENST00000358894 ATAD2Q6PL18 1390 aa15.2■□□□□ 0.02
COL20A1-201ENST00000358894 CHMP5Q9NZZ3 219 aa15.2■□□□□ 0.02
COL20A1-201ENST00000358894 ABCA8O94911 1581 aa15.2■□□□□ 0.02
COL20A1-201ENST00000358894 ABCC2Q92887 1545 aa15.2■□□□□ 0.02
COL20A1-201ENST00000358894 A0A0G2JS52 829 aa15.19■□□□□ 0.02
COL20A1-201ENST00000358894 CDK11BP21127 795 aaKnown RBP15.19■□□□□ 0.02
COL20A1-201ENST00000358894 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
COL20A1-201ENST00000358894 EIF2AK4Q9P2K8 1649 aaKnown RBP15.19■□□□□ 0.02
COL20A1-201ENST00000358894 ASXL2Q76L83 1435 aa15.18■□□□□ 0.02
COL20A1-201ENST00000358894 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL20A1-201ENST00000358894 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
COL20A1-201ENST00000358894 PCDHB15Q9Y5E8 787 aa15.17■□□□□ 0.02
COL20A1-201ENST00000358894 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
COL20A1-201ENST00000358894 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
COL20A1-201ENST00000358894 TRIM27P14373 513 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 SAMD9LQ8IVG5 1584 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 CT47B1P0C2W7 299 aaPredicted RBP15.16■□□□□ 0.02
COL20A1-201ENST00000358894 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 BCORL1Q5H9F3 1711 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 FCHSD2O94868 740 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 EMILIN1Q9Y6C2 1016 aa15.16■□□□□ 0.02
COL20A1-201ENST00000358894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL20A1-201ENST00000358894 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
COL20A1-201ENST00000358894 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms