RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OLFM4Q6UX06 510 aa10.53□□□□□ -0.72
COL6A6-201ENST00000358511 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
COL6A6-201ENST00000358511 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
COL6A6-201ENST00000358511 TAF7LQ5H9L4 462 aa10.52□□□□□ -0.72
COL6A6-201ENST00000358511 SPC24Q8NBT2 197 aa10.52□□□□□ -0.72
COL6A6-201ENST00000358511 PCMTD1Q96MG8 357 aaPredicted RBP10.52□□□□□ -0.73
COL6A6-201ENST00000358511 HDGFP51858 240 aaKnown RBP10.52□□□□□ -0.73
COL6A6-201ENST00000358511 HSP90AB3PQ58FF7 597 aa10.52□□□□□ -0.73
COL6A6-201ENST00000358511 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
COL6A6-201ENST00000358511 AKAP17AQ02040 695 aaKnown RBP10.52□□□□□ -0.73
COL6A6-201ENST00000358511 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
COL6A6-201ENST00000358511 CARMIL2Q6F5E8 1435 aa10.52□□□□□ -0.73
COL6A6-201ENST00000358511 FGD6Q6ZV73 1430 aa10.52□□□□□ -0.73
COL6A6-201ENST00000358511 DYNC1I1O14576 645 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 MYO6Q9UM54 1294 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 CPLX1O14810 134 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 ERLIN1O75477 346 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 RUNDC1Q96C34 613 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 API5Q9BZZ5 524 aaKnown RBP10.51□□□□□ -0.73
COL6A6-201ENST00000358511 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
COL6A6-201ENST00000358511 STK26Q9P289 416 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 ERICH3Q5RHP9 1530 aa10.51□□□□□ -0.73
COL6A6-201ENST00000358511 SMC2O95347 1197 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 PDE3AQ14432 1141 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 G3V3G9 751 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 SDF4Q9BRK5 362 aa10.5□□□□□ -0.73
COL6A6-201ENST00000358511 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
COL6A6-201ENST00000358511 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
COL6A6-201ENST00000358511 CT47B1P0C2W7 299 aaPredicted RBP10.49□□□□□ -0.73
COL6A6-201ENST00000358511 GOLGA6L10A6NI86 522 aa10.49□□□□□ -0.73
COL6A6-201ENST00000358511 SYNE3Q6ZMZ3 975 aa10.49□□□□□ -0.73
COL6A6-201ENST00000358511 PDILTQ8N807 584 aa10.49□□□□□ -0.73
COL6A6-201ENST00000358511 KIF2AO00139 706 aaPredicted RBP10.49□□□□□ -0.73
COL6A6-201ENST00000358511 MCM5P33992 734 aa10.49□□□□□ -0.73
COL6A6-201ENST00000358511 CGNQ9P2M7 1197 aaKnown RBP10.49□□□□□ -0.73
COL6A6-201ENST00000358511 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
COL6A6-201ENST00000358511 CCDC47Q96A33 483 aaKnown RBP10.48□□□□□ -0.73
COL6A6-201ENST00000358511 PSMA5P28066 241 aa10.48□□□□□ -0.73
COL6A6-201ENST00000358511 ERC2O15083 957 aa10.48□□□□□ -0.73
COL6A6-201ENST00000358511 WDR33Q9C0J8 1336 aaKnown RBP10.48□□□□□ -0.73
COL6A6-201ENST00000358511 RUSC2Q8N2Y8 1516 aa10.48□□□□□ -0.73
COL6A6-201ENST00000358511 NAP1L1P55209 391 aaKnown RBP10.48□□□□□ -0.73
COL6A6-201ENST00000358511 SMARCE1Q969G3 411 aa10.48□□□□□ -0.73
COL6A6-201ENST00000358511 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 ZHX1Q9UKY1 873 aaPredicted RBP10.47□□□□□ -0.73
COL6A6-201ENST00000358511 FIBPO43427 364 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 CBX1P83916 185 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
COL6A6-201ENST00000358511 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.73
COL6A6-201ENST00000358511 IQCEQ6IPM2 695 aa10.46□□□□□ -0.73
COL6A6-201ENST00000358511 NEK4P51957 841 aa10.46□□□□□ -0.73
COL6A6-201ENST00000358511 TNMDQ9H2S6 317 aa10.46□□□□□ -0.73
COL6A6-201ENST00000358511 FYCO1Q9BQS8 1478 aa10.46□□□□□ -0.73
COL6A6-201ENST00000358511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.46□□□□□ -0.74
COL6A6-201ENST00000358511 EVC2Q86UK5 1308 aa10.46□□□□□ -0.74
COL6A6-201ENST00000358511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.46□□□□□ -0.74
COL6A6-201ENST00000358511 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 GIMAP7Q8NHV1 300 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 SAFBQ15424 915 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL6A6-201ENST00000358511 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 FAM107BQ9H098 131 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 SYCE3A1L190 88 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 CLCN1P35523 988 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 DDX11Q96FC9 970 aa10.45□□□□□ -0.74
COL6A6-201ENST00000358511 TIAM1Q13009 1591 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 C9orf78Q9NZ63 289 aaPredicted RBP10.44□□□□□ -0.74
COL6A6-201ENST00000358511 RIPK4P57078 832 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 TRDNQ13061 729 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL6A6-201ENST00000358511 GCC1Q96CN9 775 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 MARCH6O60337 910 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 TIGD1Q96MW7 591 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 ELL2O00472 640 aaPredicted RBP10.44□□□□□ -0.74
COL6A6-201ENST00000358511 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 AEBP1Q8IUX7 1158 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 CNTROBQ8N137 903 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
COL6A6-201ENST00000358511 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 ZNF396Q96N95 335 aaPredicted RBP10.43□□□□□ -0.74
COL6A6-201ENST00000358511 DNAJC2Q99543 621 aaKnown RBP10.43□□□□□ -0.74
COL6A6-201ENST00000358511 ZRSR2Q15696 482 aaKnown RBP10.43□□□□□ -0.74
COL6A6-201ENST00000358511 TTLL5Q6EMB2 1281 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 PDIA4P13667 645 aaKnown RBP10.43□□□□□ -0.74
COL6A6-201ENST00000358511 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 UBXN4Q92575 508 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 SKIDA1Q1XH10 827 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
COL6A6-201ENST00000358511 KIF18AQ8NI77 898 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 KRT85P78386 507 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms