RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 SAFB2Q14151 953 aaKnown RBP eCLIP29.94■■■□□ 2.38
POLR2J2-202ENST00000358438 PUS7Q96PZ0 661 aaKnown RBP29.94■■■□□ 2.38
POLR2J2-202ENST00000358438 PRAM1Q96QH2 718 aa29.94■■■□□ 2.38
POLR2J2-202ENST00000358438 DLC1Q96QB1 1528 aa29.93■■■□□ 2.38
POLR2J2-202ENST00000358438 TMC1Q8TDI8 760 aa29.93■■■□□ 2.38
POLR2J2-202ENST00000358438 LRPPRCP42704 1394 aaKnown RBP29.92■■■□□ 2.38
POLR2J2-202ENST00000358438 HNRNPUQ00839 825 aaKnown RBP eCLIP29.92■■■□□ 2.38
POLR2J2-202ENST00000358438 AMER1Q5JTC6 1135 aaPredicted RBP29.92■■■□□ 2.38
POLR2J2-202ENST00000358438 NLRP13Q86W25 1043 aa29.91■■■□□ 2.38
POLR2J2-202ENST00000358438 POGKQ9P215 609 aa29.91■■■□□ 2.38
POLR2J2-202ENST00000358438 METP08581 1390 aa29.89■■■□□ 2.38
POLR2J2-202ENST00000358438 SLIT1O75093 1534 aa29.89■■■□□ 2.38
POLR2J2-202ENST00000358438 ABCC11Q96J66 1382 aa29.88■■■□□ 2.37
POLR2J2-202ENST00000358438 NPC1L1Q9UHC9 1359 aa29.88■■■□□ 2.37
POLR2J2-202ENST00000358438 ARHGAP23Q9P227 1491 aa29.87■■■□□ 2.37
POLR2J2-202ENST00000358438 LTKP29376 864 aa29.86■■■□□ 2.37
POLR2J2-202ENST00000358438 PNISRQ8TF01 805 aaKnown RBP29.86■■■□□ 2.37
POLR2J2-202ENST00000358438 PLEKHG1Q9ULL1 1385 aa29.86■■■□□ 2.37
POLR2J2-202ENST00000358438 CARD14Q9BXL6 1004 aa29.85■■■□□ 2.37
POLR2J2-202ENST00000358438 SLC12A5Q9H2X9 1139 aa29.84■■■□□ 2.37
POLR2J2-202ENST00000358438 MINK1Q8N4C8 1332 aaPredicted RBP29.84■■■□□ 2.37
POLR2J2-202ENST00000358438 KNDC1Q76NI1 1749 aa29.83■■■□□ 2.37
POLR2J2-202ENST00000358438 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
POLR2J2-202ENST00000358438 ADAMTS13Q76LX8 1427 aa29.83■■■□□ 2.37
POLR2J2-202ENST00000358438 CABP2Q9NPB3 220 aa29.83■■■□□ 2.37
POLR2J2-202ENST00000358438 EID1Q9Y6B2 187 aa29.83■■■□□ 2.37
POLR2J2-202ENST00000358438 THEMISQ8N1K5 641 aaPredicted RBP29.82■■■□□ 2.36
POLR2J2-202ENST00000358438 NOP58Q9Y2X3 529 aaKnown RBP29.8■■■□□ 2.36
POLR2J2-202ENST00000358438 CEP170BQ9Y4F5 1589 aaPredicted RBP29.8■■■□□ 2.36
POLR2J2-202ENST00000358438 TECPR2O15040 1411 aa29.8■■■□□ 2.36
POLR2J2-202ENST00000358438 SRPK2P78362 688 aaKnown RBP29.79■■■□□ 2.36
POLR2J2-202ENST00000358438 WAPLQ7Z5K2 1190 aa29.78■■■□□ 2.36
POLR2J2-202ENST00000358438 PLEKHH1Q9ULM0 1364 aa29.78■■■□□ 2.36
POLR2J2-202ENST00000358438 NINLQ9Y2I6 1382 aa29.77■■■□□ 2.36
POLR2J2-202ENST00000358438 CPS1P31327 1500 aa29.77■■■□□ 2.36
POLR2J2-202ENST00000358438 NSD3Q9BZ95 1437 aa29.77■■■□□ 2.36
POLR2J2-202ENST00000358438 ATAD2Q6PL18 1390 aa29.76■■■□□ 2.35
POLR2J2-202ENST00000358438 MED14O60244 1454 aa29.75■■■□□ 2.35
POLR2J2-202ENST00000358438 FAM135BQ49AJ0 1406 aa29.75■■■□□ 2.35
POLR2J2-202ENST00000358438 ANKRD36BQ8N2N9 1353 aa29.75■■■□□ 2.35
POLR2J2-202ENST00000358438 USP32Q8NFA0 1604 aa29.74■■■□□ 2.35
POLR2J2-202ENST00000358438 PPP2R1AP30153 589 aa29.73■■■□□ 2.35
POLR2J2-202ENST00000358438 SIRT1Q96EB6 747 aa29.73■■■□□ 2.35
POLR2J2-202ENST00000358438 IRX6P78412 446 aaPredicted RBP29.73■■■□□ 2.35
POLR2J2-202ENST00000358438 CDK19Q9BWU1 502 aa29.72■■■□□ 2.35
POLR2J2-202ENST00000358438 ZBED9Q6R2W3 1325 aa29.72■■■□□ 2.35
POLR2J2-202ENST00000358438 ZNF142P52746 1687 aaPredicted RBP29.71■■■□□ 2.35
POLR2J2-202ENST00000358438 SLC26A8Q96RN1 970 aa29.68■■■□□ 2.34
POLR2J2-202ENST00000358438 SETD1BQ9UPS6 1966 aaKnown RBP29.67■■■□□ 2.34
POLR2J2-202ENST00000358438 DIP2AQ14689 1571 aa29.67■■■□□ 2.34
POLR2J2-202ENST00000358438 A0A1W2PP64 1363 aa29.65■■■□□ 2.34
POLR2J2-202ENST00000358438 TBX22Q9Y458 520 aa29.65■■■□□ 2.34
POLR2J2-202ENST00000358438 CGNL1Q0VF96 1302 aa29.65■■■□□ 2.34
POLR2J2-202ENST00000358438 ROBO2Q9HCK4 1378 aa29.65■■■□□ 2.34
POLR2J2-202ENST00000358438 PTPRUQ92729 1446 aa29.62■■■□□ 2.33
POLR2J2-202ENST00000358438 CD163L1Q9NR16 1453 aa29.62■■■□□ 2.33
POLR2J2-202ENST00000358438 TERF2IPQ9NYB0 399 aa29.62■■■□□ 2.33
POLR2J2-202ENST00000358438 WASLO00401 505 aaPredicted RBP29.61■■■□□ 2.33
POLR2J2-202ENST00000358438 NSD2O96028 1365 aa29.59■■■□□ 2.33
POLR2J2-202ENST00000358438 INSRP06213 1382 aa29.58■■■□□ 2.33
POLR2J2-202ENST00000358438 MORC1Q86VD1 984 aa29.57■■■□□ 2.32
POLR2J2-202ENST00000358438 CABP1Q9NZU7 370 aa29.57■■■□□ 2.32
POLR2J2-202ENST00000358438 ADGRB2O60241 1585 aa29.56■■■□□ 2.32
POLR2J2-202ENST00000358438 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.55■■■□□ 2.32
POLR2J2-202ENST00000358438 AMOTL2Q9Y2J4 779 aa29.55■■■□□ 2.32
POLR2J2-202ENST00000358438 ATP7BP35670 1465 aa29.55■■■□□ 2.32
POLR2J2-202ENST00000358438 B4GALNT3Q6L9W6 998 aa29.54■■■□□ 2.32
POLR2J2-202ENST00000358438 HDGFL2Q7Z4V5 671 aaPredicted RBP29.54■■■□□ 2.32
POLR2J2-202ENST00000358438 PTCH1Q13635 1447 aa29.53■■■□□ 2.32
POLR2J2-202ENST00000358438 ANKLE2Q86XL3 938 aa29.53■■■□□ 2.32
POLR2J2-202ENST00000358438 BLMP54132 1417 aaPredicted RBP29.53■■■□□ 2.32
POLR2J2-202ENST00000358438 HSPA2P54652 639 aa29.52■■■□□ 2.32
POLR2J2-202ENST00000358438 XRN1Q8IZH2 1706 aaKnown RBP29.52■■■□□ 2.32
POLR2J2-202ENST00000358438 IPO9Q96P70 1041 aaKnown RBP29.51■■■□□ 2.31
POLR2J2-202ENST00000358438 ANP32AP39687 249 aaKnown RBP29.5■■■□□ 2.31
POLR2J2-202ENST00000358438 RTL5Q5HYW3 569 aaPredicted RBP29.5■■■□□ 2.31
POLR2J2-202ENST00000358438 PPIP5K1Q6PFW1 1433 aa29.5■■■□□ 2.31
POLR2J2-202ENST00000358438 PIK3R4Q99570 1358 aa29.49■■■□□ 2.31
POLR2J2-202ENST00000358438 PAK3O75914 559 aaPredicted RBP29.48■■■□□ 2.31
POLR2J2-202ENST00000358438 WDR43Q15061 677 aaKnown RBP eCLIP29.48■■■□□ 2.31
POLR2J2-202ENST00000358438 NUDT16Q96DE0 195 aaKnown RBP29.48■■■□□ 2.31
POLR2J2-202ENST00000358438 ANKRD26Q9UPS8 1709 aa29.48■■■□□ 2.31
POLR2J2-202ENST00000358438 ADAMTS8Q9UP79 889 aa29.48■■■□□ 2.31
POLR2J2-202ENST00000358438 SENP3-EIF4A1A0A087X0R7 540 aa29.47■■■□□ 2.31
POLR2J2-202ENST00000358438 TNNT2P45379 298 aaPredicted RBP29.47■■■□□ 2.31
POLR2J2-202ENST00000358438 POLR3AO14802 1390 aaPredicted RBP29.46■■■□□ 2.31
POLR2J2-202ENST00000358438 NBR1Q14596 966 aa29.46■■■□□ 2.31
POLR2J2-202ENST00000358438 LMTK3Q96Q04 1460 aa29.46■■■□□ 2.31
POLR2J2-202ENST00000358438 CCDC61Q9Y6R9 512 aa29.46■■■□□ 2.31
POLR2J2-202ENST00000358438 KIF20BQ96Q89 1820 aa29.45■■■□□ 2.3
POLR2J2-202ENST00000358438 CPSF1Q10570 1443 aaKnown RBP29.45■■■□□ 2.3
POLR2J2-202ENST00000358438 SMG6Q86US8 1419 aaKnown RBP29.45■■■□□ 2.3
POLR2J2-202ENST00000358438 CDC42BPGQ6DT37 1551 aa29.44■■■□□ 2.3
POLR2J2-202ENST00000358438 FYB1O15117 783 aa29.43■■■□□ 2.3
POLR2J2-202ENST00000358438 PRR36Q9H6K5 1346 aa29.42■■■□□ 2.3
POLR2J2-202ENST00000358438 GGNBP2Q9H3C7 697 aa29.42■■■□□ 2.3
POLR2J2-202ENST00000358438 AEBP2Q6ZN18 517 aaPredicted RBP29.41■■■□□ 2.3
POLR2J2-202ENST00000358438 RNF123Q5XPI4 1314 aa29.4■■■□□ 2.3
POLR2J2-202ENST00000358438 TOPAZ1Q8N9V7 1692 aa29.4■■■□□ 2.3
POLR2J2-202ENST00000358438 NCKAP5LQ9HCH0 1330 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms