RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
CCNE1-202ENST00000357943 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.93■□□□□ 0.94
CCNE1-202ENST00000357943 NCOA3Q9Y6Q9 1424 aa20.92■□□□□ 0.94
CCNE1-202ENST00000357943 TESK2Q96S53 571 aa20.92■□□□□ 0.94
CCNE1-202ENST00000357943 XIRP1Q702N8 1843 aaKnown RBP20.91■□□□□ 0.94
CCNE1-202ENST00000357943 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
CCNE1-202ENST00000357943 QRICH2Q9H0J4 1663 aa20.9■□□□□ 0.94
CCNE1-202ENST00000357943 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
CCNE1-202ENST00000357943 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
CCNE1-202ENST00000357943 SBNO2Q9Y2G9 1366 aa20.88■□□□□ 0.93
CCNE1-202ENST00000357943 MSH6P52701 1360 aa20.87■□□□□ 0.93
CCNE1-202ENST00000357943 WASLO00401 505 aaPredicted RBP20.85■□□□□ 0.93
CCNE1-202ENST00000357943 CERKQ8TCT0 537 aa20.85■□□□□ 0.93
CCNE1-202ENST00000357943 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
CCNE1-202ENST00000357943 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.93
CCNE1-202ENST00000357943 CDK19Q9BWU1 502 aa20.83■□□□□ 0.93
CCNE1-202ENST00000357943 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 ATF3P18847 181 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 DISP3Q9P2K9 1392 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 DCCP43146 1447 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
CCNE1-202ENST00000357943 TMF1P82094 1093 aa20.81■□□□□ 0.92
CCNE1-202ENST00000357943 CADPS2Q86UW7 1296 aa20.81■□□□□ 0.92
CCNE1-202ENST00000357943 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
CCNE1-202ENST00000357943 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
CCNE1-202ENST00000357943 SRPK2P78362 688 aaKnown RBP20.8■□□□□ 0.92
CCNE1-202ENST00000357943 C11orf95C9JLR9 678 aaPredicted RBP20.79■□□□□ 0.92
CCNE1-202ENST00000357943 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
CCNE1-202ENST00000357943 PRR36Q9H6K5 1346 aa20.77■□□□□ 0.92
CCNE1-202ENST00000357943 MST1RQ04912 1400 aa20.76■□□□□ 0.91
CCNE1-202ENST00000357943 FMN2Q9NZ56 1722 aa20.76■□□□□ 0.91
CCNE1-202ENST00000357943 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
CCNE1-202ENST00000357943 SLAIN2Q9P270 581 aa20.75■□□□□ 0.91
CCNE1-202ENST00000357943 ATP7BP35670 1465 aa20.74■□□□□ 0.91
CCNE1-202ENST00000357943 C1orf167Q5SNV9 1468 aa20.74■□□□□ 0.91
CCNE1-202ENST00000357943 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
CCNE1-202ENST00000357943 ANKARQ7Z5J8 1434 aa20.72■□□□□ 0.91
CCNE1-202ENST00000357943 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
CCNE1-202ENST00000357943 UBAP1LF5GYI3 381 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 TOM1O60784 492 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
CCNE1-202ENST00000357943 ORAI2Q96SN7 254 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 ATAD2Q6PL18 1390 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 ESCO1Q5FWF5 840 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
CCNE1-202ENST00000357943 WASHC2AQ641Q2 1341 aa20.7■□□□□ 0.9
CCNE1-202ENST00000357943 CABP1Q9NZU7 370 aa20.68■□□□□ 0.9
CCNE1-202ENST00000357943 RGPD8O14715 1765 aaPredicted RBP20.68■□□□□ 0.9
CCNE1-202ENST00000357943 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 PIP4K2BP78356 416 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 TMC1Q8TDI8 760 aa20.67■□□□□ 0.9
CCNE1-202ENST00000357943 SLC12A5Q9H2X9 1139 aa20.66■□□□□ 0.9
CCNE1-202ENST00000357943 PHF8Q9UPP1 1060 aa20.66■□□□□ 0.9
CCNE1-202ENST00000357943 TOPAZ1Q8N9V7 1692 aa20.65■□□□□ 0.9
CCNE1-202ENST00000357943 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.9
CCNE1-202ENST00000357943 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.89
CCNE1-202ENST00000357943 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
CCNE1-202ENST00000357943 DDX17Q92841 729 aaKnown RBP20.62■□□□□ 0.89
CCNE1-202ENST00000357943 FOXO3O43524 673 aa20.61■□□□□ 0.89
CCNE1-202ENST00000357943 ACEP12821 1306 aa20.61■□□□□ 0.89
CCNE1-202ENST00000357943 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
CCNE1-202ENST00000357943 ROBO1Q9Y6N7 1651 aa20.6■□□□□ 0.89
CCNE1-202ENST00000357943 NINLQ9Y2I6 1382 aa20.6■□□□□ 0.89
CCNE1-202ENST00000357943 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
CCNE1-202ENST00000357943 MYOM1P52179 1685 aa20.6■□□□□ 0.89
CCNE1-202ENST00000357943 CD163L1Q9NR16 1453 aa20.59■□□□□ 0.89
CCNE1-202ENST00000357943 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
CCNE1-202ENST00000357943 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
CCNE1-202ENST00000357943 KIF1AQ12756 1690 aa20.57■□□□□ 0.88
CCNE1-202ENST00000357943 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
CCNE1-202ENST00000357943 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
CCNE1-202ENST00000357943 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
CCNE1-202ENST00000357943 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
CCNE1-202ENST00000357943 PSME1Q06323 249 aa20.55■□□□□ 0.88
CCNE1-202ENST00000357943 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
CCNE1-202ENST00000357943 PANK3Q9H999 370 aa20.55■□□□□ 0.88
CCNE1-202ENST00000357943 TERF2IPQ9NYB0 399 aa20.55■□□□□ 0.88
CCNE1-202ENST00000357943 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
CCNE1-202ENST00000357943 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
CCNE1-202ENST00000357943 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
CCNE1-202ENST00000357943 USP6P35125 1406 aa20.52■□□□□ 0.88
CCNE1-202ENST00000357943 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
CCNE1-202ENST00000357943 SOS2Q07890 1332 aaPredicted RBP20.51■□□□□ 0.87
CCNE1-202ENST00000357943 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
CCNE1-202ENST00000357943 PXDNQ92626 1479 aa20.51■□□□□ 0.87
CCNE1-202ENST00000357943 NHSL1Q5SYE7 1610 aa20.51■□□□□ 0.87
CCNE1-202ENST00000357943 AHDC1Q5TGY3 1603 aaPredicted RBP20.5■□□□□ 0.87
CCNE1-202ENST00000357943 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
CCNE1-202ENST00000357943 SSH2Q76I76 1423 aa20.49■□□□□ 0.87
CCNE1-202ENST00000357943 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
CCNE1-202ENST00000357943 FBXO41Q8TF61 875 aa20.48■□□□□ 0.87
CCNE1-202ENST00000357943 NSD3Q9BZ95 1437 aa20.47■□□□□ 0.87
CCNE1-202ENST00000357943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCNE1-202ENST00000357943 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms