RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TMEM131LA2VDJ0 1609 aa20.83■□□□□ 0.93
PHTF1-201ENST00000357783 SLFN5Q08AF3 891 aa20.83■□□□□ 0.92
PHTF1-201ENST00000357783 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
PHTF1-201ENST00000357783 C20orf194Q5TEA3 1177 aa20.82■□□□□ 0.92
PHTF1-201ENST00000357783 FBXO31Q5XUX0 539 aaPredicted RBP20.82■□□□□ 0.92
PHTF1-201ENST00000357783 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
PHTF1-201ENST00000357783 ZFYVE9O95405 1425 aa20.81■□□□□ 0.92
PHTF1-201ENST00000357783 USP32Q8NFA0 1604 aa20.8■□□□□ 0.92
PHTF1-201ENST00000357783 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
PHTF1-201ENST00000357783 CGNL1Q0VF96 1302 aa20.8■□□□□ 0.92
PHTF1-201ENST00000357783 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
PHTF1-201ENST00000357783 SHPRHQ149N8 1683 aa20.79■□□□□ 0.92
PHTF1-201ENST00000357783 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
PHTF1-201ENST00000357783 TRMT2AQ8IZ69 625 aaKnown RBP20.77■□□□□ 0.91
PHTF1-201ENST00000357783 PUS7Q96PZ0 661 aaKnown RBP20.77■□□□□ 0.91
PHTF1-201ENST00000357783 ERICH6Q7L0X2 663 aa20.76■□□□□ 0.91
PHTF1-201ENST00000357783 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
PHTF1-201ENST00000357783 SRPK2P78362 688 aaKnown RBP20.74■□□□□ 0.91
PHTF1-201ENST00000357783 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
PHTF1-201ENST00000357783 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
PHTF1-201ENST00000357783 E9PSI1 815 aa20.74■□□□□ 0.91
PHTF1-201ENST00000357783 MTHFSP49914 203 aa20.74■□□□□ 0.91
PHTF1-201ENST00000357783 PTPRMP28827 1452 aa20.73■□□□□ 0.91
PHTF1-201ENST00000357783 MINK1Q8N4C8 1332 aaPredicted RBP20.72■□□□□ 0.91
PHTF1-201ENST00000357783 PRAM1Q96QH2 718 aa20.72■□□□□ 0.91
PHTF1-201ENST00000357783 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
PHTF1-201ENST00000357783 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
PHTF1-201ENST00000357783 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
PHTF1-201ENST00000357783 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
PHTF1-201ENST00000357783 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
PHTF1-201ENST00000357783 POGKQ9P215 609 aa20.71■□□□□ 0.91
PHTF1-201ENST00000357783 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
PHTF1-201ENST00000357783 A0A1W2PP64 1363 aa20.7■□□□□ 0.9
PHTF1-201ENST00000357783 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
PHTF1-201ENST00000357783 RRP7AQ9Y3A4 280 aaKnown RBP20.7■□□□□ 0.9
PHTF1-201ENST00000357783 NSD2O96028 1365 aa20.7■□□□□ 0.9
PHTF1-201ENST00000357783 MLECQ14165 292 aa20.69■□□□□ 0.9
PHTF1-201ENST00000357783 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
PHTF1-201ENST00000357783 REREQ9P2R6 1566 aa20.69■□□□□ 0.9
PHTF1-201ENST00000357783 ALKQ9UM73 1620 aa20.69■□□□□ 0.9
PHTF1-201ENST00000357783 RUNDC1Q96C34 613 aa20.69■□□□□ 0.9
PHTF1-201ENST00000357783 AGLP35573 1532 aa20.68■□□□□ 0.9
PHTF1-201ENST00000357783 SKAP1Q86WV1 359 aa20.68■□□□□ 0.9
PHTF1-201ENST00000357783 BCAR3O75815 825 aa20.67■□□□□ 0.9
PHTF1-201ENST00000357783 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
PHTF1-201ENST00000357783 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
PHTF1-201ENST00000357783 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
PHTF1-201ENST00000357783 ABCC11Q96J66 1382 aa20.66■□□□□ 0.9
PHTF1-201ENST00000357783 IQSEC2Q5JU85 1478 aa20.66■□□□□ 0.9
PHTF1-201ENST00000357783 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
PHTF1-201ENST00000357783 GGNBP2Q9H3C7 697 aa20.64■□□□□ 0.9
PHTF1-201ENST00000357783 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
PHTF1-201ENST00000357783 PDE4AP27815 886 aa20.63■□□□□ 0.89
PHTF1-201ENST00000357783 KDM2BQ8NHM5 1336 aa20.63■□□□□ 0.89
PHTF1-201ENST00000357783 MS4A1P11836 297 aa20.62■□□□□ 0.89
PHTF1-201ENST00000357783 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
PHTF1-201ENST00000357783 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
PHTF1-201ENST00000357783 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
PHTF1-201ENST00000357783 TERF2IPQ9NYB0 399 aa20.62■□□□□ 0.89
PHTF1-201ENST00000357783 SPATA31D1Q6ZQQ2 1576 aa20.62■□□□□ 0.89
PHTF1-201ENST00000357783 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
PHTF1-201ENST00000357783 CD163L1Q9NR16 1453 aa20.6■□□□□ 0.89
PHTF1-201ENST00000357783 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
PHTF1-201ENST00000357783 RIMS2Q9UQ26 1411 aa20.6■□□□□ 0.89
PHTF1-201ENST00000357783 CENPQQ7L2Z9 268 aaPredicted RBP20.59■□□□□ 0.89
PHTF1-201ENST00000357783 BACH2Q9BYV9 841 aa20.59■□□□□ 0.89
PHTF1-201ENST00000357783 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
PHTF1-201ENST00000357783 IPO9Q96P70 1041 aaKnown RBP20.58■□□□□ 0.89
PHTF1-201ENST00000357783 ARHGEF40Q8TER5 1519 aa20.58■□□□□ 0.89
PHTF1-201ENST00000357783 FYB1O15117 783 aa20.58■□□□□ 0.88
PHTF1-201ENST00000357783 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.88
PHTF1-201ENST00000357783 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.88
PHTF1-201ENST00000357783 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
PHTF1-201ENST00000357783 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
PHTF1-201ENST00000357783 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
PHTF1-201ENST00000357783 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
PHTF1-201ENST00000357783 KIF13AQ9H1H9 1805 aa20.56■□□□□ 0.88
PHTF1-201ENST00000357783 CANXP27824 592 aaKnown RBP20.56■□□□□ 0.88
PHTF1-201ENST00000357783 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
PHTF1-201ENST00000357783 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
PHTF1-201ENST00000357783 SETD1AO15047 1707 aaKnown RBP20.55■□□□□ 0.88
PHTF1-201ENST00000357783 NLRP1Q9C000 1473 aa20.55■□□□□ 0.88
PHTF1-201ENST00000357783 CCDC27Q2M243 656 aa20.54■□□□□ 0.88
PHTF1-201ENST00000357783 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
PHTF1-201ENST00000357783 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
PHTF1-201ENST00000357783 DLC1Q96QB1 1528 aa20.53■□□□□ 0.88
PHTF1-201ENST00000357783 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
PHTF1-201ENST00000357783 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
PHTF1-201ENST00000357783 MED14O60244 1454 aa20.52■□□□□ 0.88
PHTF1-201ENST00000357783 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
PHTF1-201ENST00000357783 PANK1Q8TE04 598 aa20.52■□□□□ 0.87
PHTF1-201ENST00000357783 PDE3AQ14432 1141 aa20.51■□□□□ 0.87
PHTF1-201ENST00000357783 RARSP54136 660 aaKnown RBP20.51■□□□□ 0.87
PHTF1-201ENST00000357783 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
PHTF1-201ENST00000357783 ZMYM3Q14202 1370 aa20.5■□□□□ 0.87
PHTF1-201ENST00000357783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
PHTF1-201ENST00000357783 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
PHTF1-201ENST00000357783 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
PHTF1-201ENST00000357783 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
PHTF1-201ENST00000357783 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 504.7 ms