RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 ERBB4Q15303 1308 aa14.28□□□□□ -0.12
PSEN1-202ENST00000357710 ABCA6Q8N139 1617 aa14.28□□□□□ -0.12
PSEN1-202ENST00000357710 DEPDC5O75140 1603 aa14.28□□□□□ -0.12
PSEN1-202ENST00000357710 PHF14O94880 888 aa14.28□□□□□ -0.12
PSEN1-202ENST00000357710 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
PSEN1-202ENST00000357710 CCDC9Q9Y3X0 531 aaKnown RBP14.28□□□□□ -0.12
PSEN1-202ENST00000357710 TSPYL1Q9H0U9 437 aa14.27□□□□□ -0.12
PSEN1-202ENST00000357710 APPP05067 770 aa14.27□□□□□ -0.13
PSEN1-202ENST00000357710 NUDCQ9Y266 331 aa14.27□□□□□ -0.13
PSEN1-202ENST00000357710 DHX29Q7Z478 1369 aaKnown RBP14.26□□□□□ -0.13
PSEN1-202ENST00000357710 A2MP01023 1474 aa14.26□□□□□ -0.13
PSEN1-202ENST00000357710 CEP120Q8N960 986 aa14.26□□□□□ -0.13
PSEN1-202ENST00000357710 DIP2CQ9Y2E4 1556 aa14.25□□□□□ -0.13
PSEN1-202ENST00000357710 RAPGEF3O95398 923 aa14.24□□□□□ -0.13
PSEN1-202ENST00000357710 SIN3AQ96ST3 1273 aa14.24□□□□□ -0.13
PSEN1-202ENST00000357710 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.24□□□□□ -0.13
PSEN1-202ENST00000357710 BCORL1Q5H9F3 1711 aa14.24□□□□□ -0.13
PSEN1-202ENST00000357710 CLSTN1O94985 981 aa14.23□□□□□ -0.13
PSEN1-202ENST00000357710 PRDM15P57071 1507 aaPredicted RBP14.23□□□□□ -0.13
PSEN1-202ENST00000357710 RALBP1Q15311 655 aa14.23□□□□□ -0.13
PSEN1-202ENST00000357710 ZSCAN30Q86W11 494 aa14.23□□□□□ -0.13
PSEN1-202ENST00000357710 ANKRD30BQ9BXX2 1392 aa14.23□□□□□ -0.13
PSEN1-202ENST00000357710 RNF17Q9BXT8 1623 aaKnown RBP14.23□□□□□ -0.13
PSEN1-202ENST00000357710 TONSLQ96HA7 1378 aa14.22□□□□□ -0.13
PSEN1-202ENST00000357710 PKD2Q13563 968 aa14.22□□□□□ -0.13
PSEN1-202ENST00000357710 PANK2Q9BZ23 570 aa14.22□□□□□ -0.13
PSEN1-202ENST00000357710 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
PSEN1-202ENST00000357710 GRPEL1Q9HAV7 217 aa14.21□□□□□ -0.14
PSEN1-202ENST00000357710 KANK1Q14678 1352 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 UQCRHLA0A096LP55 91 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 UQCRHP07919 91 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 IRX5P78411 483 aaPredicted RBP14.2□□□□□ -0.14
PSEN1-202ENST00000357710 CSPP1Q1MSJ5 1256 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.142e-7■□□□□ 10.6
PSEN1-202ENST00000357710 MROH1Q8NDA8 1641 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 CC2D1BQ5T0F9 858 aaKnown RBP14.2□□□□□ -0.14
PSEN1-202ENST00000357710 VWDEQ8N2E2 1590 aa14.2□□□□□ -0.14
PSEN1-202ENST00000357710 SLC52A1Q9NWF4 448 aa14.19□□□□□ -0.14
PSEN1-202ENST00000357710 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
PSEN1-202ENST00000357710 TET3O43151 1660 aa14.19□□□□□ -0.14
PSEN1-202ENST00000357710 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
PSEN1-202ENST00000357710 KIF3BO15066 747 aa14.18□□□□□ -0.14
PSEN1-202ENST00000357710 BECN1Q14457 450 aa14.18□□□□□ -0.14
PSEN1-202ENST00000357710 PLCD4Q9BRC7 762 aa14.18□□□□□ -0.14
PSEN1-202ENST00000357710 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
PSEN1-202ENST00000357710 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
PSEN1-202ENST00000357710 CCDC173Q0VFZ6 552 aa14.17□□□□□ -0.14
PSEN1-202ENST00000357710 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
PSEN1-202ENST00000357710 PATL2C9JE40 543 aaKnown RBP14.17□□□□□ -0.14
PSEN1-202ENST00000357710 MSNP26038 577 aaKnown RBP14.17□□□□□ -0.14
PSEN1-202ENST00000357710 ARHGEF40Q8TER5 1519 aa14.17□□□□□ -0.14
PSEN1-202ENST00000357710 CCDC66A2RUB6 948 aa14.17□□□□□ -0.14
PSEN1-202ENST00000357710 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
PSEN1-202ENST00000357710 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
PSEN1-202ENST00000357710 SOX12O15370 315 aa14.15□□□□□ -0.14
PSEN1-202ENST00000357710 E9PCH4 1651 aa14.15□□□□□ -0.14
PSEN1-202ENST00000357710 NINLQ9Y2I6 1382 aa14.15□□□□□ -0.14
PSEN1-202ENST00000357710 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
PSEN1-202ENST00000357710 LMTK2Q8IWU2 1503 aa14.14□□□□□ -0.15
PSEN1-202ENST00000357710 ATP10AO60312 1499 aa14.14□□□□□ -0.15
PSEN1-202ENST00000357710 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-202ENST00000357710 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
PSEN1-202ENST00000357710 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
PSEN1-202ENST00000357710 COL17A1Q9UMD9 1497 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-202ENST00000357710 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
PSEN1-202ENST00000357710 CEP152O94986 1710 aa14.13□□□□□ -0.15
PSEN1-202ENST00000357710 EFCAB6Q5THR3 1501 aa14.13□□□□□ -0.15
PSEN1-202ENST00000357710 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-202ENST00000357710 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
PSEN1-202ENST00000357710 ZC3H13Q5T200 1668 aaKnown RBP14.13□□□□□ -0.15
PSEN1-202ENST00000357710 FAM161AQ3B820 660 aa14.12□□□□□ -0.15
PSEN1-202ENST00000357710 R3HCC1Q9Y3T6 440 aaKnown RBP14.12□□□□□ -0.15
PSEN1-202ENST00000357710 E9PSI1 815 aa14.12□□□□□ -0.15
PSEN1-202ENST00000357710 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
PSEN1-202ENST00000357710 CARD10Q9BWT7 1032 aa14.12□□□□□ -0.15
PSEN1-202ENST00000357710 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
PSEN1-202ENST00000357710 NBPF20Q3BBV1 942 aa14.11□□□□□ -0.15
PSEN1-202ENST00000357710 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
PSEN1-202ENST00000357710 AGLP35573 1532 aa14.11□□□□□ -0.15
PSEN1-202ENST00000357710 TMC1Q8TDI8 760 aa14.11□□□□□ -0.15
PSEN1-202ENST00000357710 TRPM2O94759 1503 aa14.1□□□□□ -0.15
PSEN1-202ENST00000357710 CNTLNQ9NXG0 1405 aa14.1□□□□□ -0.15
PSEN1-202ENST00000357710 MCM5P33992 734 aa14.1□□□□□ -0.15
PSEN1-202ENST00000357710 ABCC3O15438 1527 aa14.09□□□□□ -0.15
PSEN1-202ENST00000357710 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
PSEN1-202ENST00000357710 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.15
PSEN1-202ENST00000357710 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
PSEN1-202ENST00000357710 PLA2R1Q13018 1463 aa14.08□□□□□ -0.16
PSEN1-202ENST00000357710 TULP2O00295 520 aa14.08□□□□□ -0.16
PSEN1-202ENST00000357710 GABPB1Q06547 395 aaPredicted RBP14.08□□□□□ -0.16
PSEN1-202ENST00000357710 GGT6Q6P531 493 aa14.07□□□□□ -0.16
PSEN1-202ENST00000357710 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
PSEN1-202ENST00000357710 KCNJ4P48050 445 aa14.06□□□□□ -0.16
PSEN1-202ENST00000357710 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
PSEN1-202ENST00000357710 PTPRTO14522 1441 aa14.06□□□□□ -0.16
PSEN1-202ENST00000357710 MCM4P33991 863 aa14.06□□□□□ -0.16
PSEN1-202ENST00000357710 RRP1P56182 461 aaKnown RBP14.06□□□□□ -0.16
PSEN1-202ENST00000357710 ZBTB22O15209 634 aa14.05□□□□□ -0.16
PSEN1-202ENST00000357710 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
PSEN1-202ENST00000357710 DDX11L8A8MPP1 907 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms