RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
LINC01560-201ENST00000357412 PLEKHH1Q9ULM0 1364 aa15.19■□□□□ 0.02
LINC01560-201ENST00000357412 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
LINC01560-201ENST00000357412 FOXO3O43524 673 aa15.18■□□□□ 0.02
LINC01560-201ENST00000357412 NGLY1Q96IV0 654 aa15.18■□□□□ 0.02
LINC01560-201ENST00000357412 C14orf93Q9H972 538 aaKnown RBP15.18■□□□□ 0.02
LINC01560-201ENST00000357412 SHPRHQ149N8 1683 aa15.18■□□□□ 0.02
LINC01560-201ENST00000357412 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
LINC01560-201ENST00000357412 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
LINC01560-201ENST00000357412 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
LINC01560-201ENST00000357412 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
LINC01560-201ENST00000357412 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
LINC01560-201ENST00000357412 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
LINC01560-201ENST00000357412 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
LINC01560-201ENST00000357412 FNBP4Q8N3X1 1017 aaPredicted RBP15.15■□□□□ 0.02
LINC01560-201ENST00000357412 NALCNQ8IZF0 1738 aa15.14■□□□□ 0.01
LINC01560-201ENST00000357412 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
LINC01560-201ENST00000357412 YTHDC2Q9H6S0 1430 aaKnown RBP15.14■□□□□ 0.01
LINC01560-201ENST00000357412 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
LINC01560-201ENST00000357412 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
LINC01560-201ENST00000357412 USP21Q9UK80 565 aa15.13■□□□□ 0.01
LINC01560-201ENST00000357412 KIF1BO60333 1816 aa15.12■□□□□ 0.01
LINC01560-201ENST00000357412 CDC42BPGQ6DT37 1551 aa15.11■□□□□ 0.01
LINC01560-201ENST00000357412 RGS12O14924 1447 aa15.11■□□□□ 0.01
LINC01560-201ENST00000357412 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
LINC01560-201ENST00000357412 MYOM2P54296 1465 aa15.11■□□□□ 0.01
LINC01560-201ENST00000357412 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
LINC01560-201ENST00000357412 PXDNQ92626 1479 aa15.1■□□□□ 0.01
LINC01560-201ENST00000357412 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
LINC01560-201ENST00000357412 DHX57Q6P158 1386 aaKnown RBP15.1■□□□□ 0.01
LINC01560-201ENST00000357412 LAMC1P11047 1609 aa15.09■□□□□ 0.01
LINC01560-201ENST00000357412 PPLO60437 1756 aa15.08■□□□□ 0.01
LINC01560-201ENST00000357412 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
LINC01560-201ENST00000357412 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
LINC01560-201ENST00000357412 KRT28Q7Z3Y7 464 aa15.07■□□□□ 0
LINC01560-201ENST00000357412 HRCP23327 699 aa15.06■□□□□ 0
LINC01560-201ENST00000357412 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
LINC01560-201ENST00000357412 ATRNO75882 1429 aa15.06■□□□□ 0
LINC01560-201ENST00000357412 BCL9LQ86UU0 1499 aa15.05■□□□□ -0
LINC01560-201ENST00000357412 DCAF11Q8TEB1 546 aa15.04■□□□□ -0
LINC01560-201ENST00000357412 POGKQ9P215 609 aa15.04■□□□□ -0
LINC01560-201ENST00000357412 GJD4Q96KN9 370 aaPredicted RBP15.03■□□□□ -0
LINC01560-201ENST00000357412 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
LINC01560-201ENST00000357412 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
LINC01560-201ENST00000357412 PSME1Q06323 249 aa15.02■□□□□ -0
LINC01560-201ENST00000357412 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
LINC01560-201ENST00000357412 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
LINC01560-201ENST00000357412 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
LINC01560-201ENST00000357412 ADRA2BP18089 450 aa15□□□□□ -0.01
LINC01560-201ENST00000357412 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
LINC01560-201ENST00000357412 CABLES1Q8TDN4 633 aa15□□□□□ -0.01
LINC01560-201ENST00000357412 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
LINC01560-201ENST00000357412 SBNO1A3KN83 1393 aa14.99□□□□□ -0.01
LINC01560-201ENST00000357412 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
LINC01560-201ENST00000357412 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
LINC01560-201ENST00000357412 TNS3Q68CZ2 1445 aa14.99□□□□□ -0.01
LINC01560-201ENST00000357412 ANKARQ7Z5J8 1434 aa14.99□□□□□ -0.01
LINC01560-201ENST00000357412 DLC1Q96QB1 1528 aa14.98□□□□□ -0.01
LINC01560-201ENST00000357412 SLIT2O94813 1529 aa14.97□□□□□ -0.01
LINC01560-201ENST00000357412 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
LINC01560-201ENST00000357412 PRR36Q9H6K5 1346 aa14.97□□□□□ -0.01
LINC01560-201ENST00000357412 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
LINC01560-201ENST00000357412 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
LINC01560-201ENST00000357412 IFT172Q9UG01 1749 aa14.97□□□□□ -0.01
LINC01560-201ENST00000357412 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
LINC01560-201ENST00000357412 HAP1P54257 671 aaPredicted RBP14.96□□□□□ -0.01
LINC01560-201ENST00000357412 ARHGEF10O15013 1369 aa14.96□□□□□ -0.02
LINC01560-201ENST00000357412 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
LINC01560-201ENST00000357412 FAM83GA6ND36 823 aa14.94□□□□□ -0.02
LINC01560-201ENST00000357412 VPS72Q15906 364 aa14.94□□□□□ -0.02
LINC01560-201ENST00000357412 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
LINC01560-201ENST00000357412 SRCAPQ6ZRS2 3230 aa14.92□□□□□ -0.02
LINC01560-201ENST00000357412 FMN2Q9NZ56 1722 aa14.92□□□□□ -0.02
LINC01560-201ENST00000357412 ONECUT3O60422 494 aaPredicted RBP14.92□□□□□ -0.02
LINC01560-201ENST00000357412 CCDC125Q86Z20 511 aa14.92□□□□□ -0.02
LINC01560-201ENST00000357412 EIF3AQ14152 1382 aaKnown RBP14.92□□□□□ -0.02
LINC01560-201ENST00000357412 GPRASP1Q5JY77 1395 aa14.91□□□□□ -0.02
LINC01560-201ENST00000357412 SEPT12Q8IYM1 358 aa14.91□□□□□ -0.02
LINC01560-201ENST00000357412 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
LINC01560-201ENST00000357412 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
LINC01560-201ENST00000357412 KIF1AQ12756 1690 aa14.89□□□□□ -0.03
LINC01560-201ENST00000357412 CDK19Q9BWU1 502 aa14.88□□□□□ -0.03
LINC01560-201ENST00000357412 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
LINC01560-201ENST00000357412 ADGRB2O60241 1585 aa14.88□□□□□ -0.03
LINC01560-201ENST00000357412 TULP4Q9NRJ4 1543 aa14.87□□□□□ -0.03
LINC01560-201ENST00000357412 NBPF1Q3BBV0 1214 aa14.87□□□□□ -0.03
LINC01560-201ENST00000357412 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
LINC01560-201ENST00000357412 USP32Q8NFA0 1604 aa14.86□□□□□ -0.03
LINC01560-201ENST00000357412 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
LINC01560-201ENST00000357412 GLI3P10071 1580 aa14.85□□□□□ -0.03
LINC01560-201ENST00000357412 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
LINC01560-201ENST00000357412 BLMP54132 1417 aaPredicted RBP14.84□□□□□ -0.03
LINC01560-201ENST00000357412 KRT27Q7Z3Y8 459 aa14.84□□□□□ -0.03
LINC01560-201ENST00000357412 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
LINC01560-201ENST00000357412 ATP7BP35670 1465 aa14.83□□□□□ -0.03
LINC01560-201ENST00000357412 EP400Q96L91 3159 aa14.83□□□□□ -0.04
LINC01560-201ENST00000357412 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
LINC01560-201ENST00000357412 FAM98CQ17RN3 349 aaKnown RBP14.83□□□□□ -0.04
LINC01560-201ENST00000357412 NBPF8Q3BBV2 869 aa14.83□□□□□ -0.04
LINC01560-201ENST00000357412 DEFB132Q7Z7B7 95 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms