RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 CPS1P31327 1500 aa24.66■■□□□ 1.54
CDK11A-202ENST00000356937 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
CDK11A-202ENST00000356937 SRPK2P78362 688 aaKnown RBP24.65■■□□□ 1.54
CDK11A-202ENST00000356937 SIRT1Q96EB6 747 aa24.65■■□□□ 1.54
CDK11A-202ENST00000356937 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
CDK11A-202ENST00000356937 FAM135BQ49AJ0 1406 aa24.64■■□□□ 1.54
CDK11A-202ENST00000356937 TMC1Q8TDI8 760 aa24.64■■□□□ 1.53
CDK11A-202ENST00000356937 NPHP4O75161 1426 aaPredicted RBP24.63■■□□□ 1.53
CDK11A-202ENST00000356937 PER1O15534 1290 aaPredicted RBP24.62■■□□□ 1.53
CDK11A-202ENST00000356937 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
CDK11A-202ENST00000356937 HSPA2P54652 639 aa24.6■■□□□ 1.53
CDK11A-202ENST00000356937 PUS7Q96PZ0 661 aaKnown RBP24.6■■□□□ 1.53
CDK11A-202ENST00000356937 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
CDK11A-202ENST00000356937 SLC12A5Q9H2X9 1139 aa24.6■■□□□ 1.53
CDK11A-202ENST00000356937 CCER2I3L3R5 266 aa24.58■■□□□ 1.53
CDK11A-202ENST00000356937 PIK3R4Q99570 1358 aa24.58■■□□□ 1.53
CDK11A-202ENST00000356937 KCNA6P17658 529 aa24.56■■□□□ 1.52
CDK11A-202ENST00000356937 KNSTRNQ9Y448 316 aa24.56■■□□□ 1.52
CDK11A-202ENST00000356937 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
CDK11A-202ENST00000356937 WASLO00401 505 aaPredicted RBP24.54■■□□□ 1.52
CDK11A-202ENST00000356937 PTCH1Q13635 1447 aa24.54■■□□□ 1.52
CDK11A-202ENST00000356937 CC2D1BQ5T0F9 858 aaKnown RBP24.54■■□□□ 1.52
CDK11A-202ENST00000356937 YTHDC1Q96MU7 727 aaKnown RBP24.54■■□□□ 1.52
CDK11A-202ENST00000356937 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
CDK11A-202ENST00000356937 CHD2O14647 1828 aaKnown RBP24.53■■□□□ 1.52
CDK11A-202ENST00000356937 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.53■■□□□ 1.52
CDK11A-202ENST00000356937 LMTK3Q96Q04 1460 aa24.52■■□□□ 1.52
CDK11A-202ENST00000356937 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
CDK11A-202ENST00000356937 CARD14Q9BXL6 1004 aa24.51■■□□□ 1.51
CDK11A-202ENST00000356937 RALBP1Q15311 655 aa24.47■■□□□ 1.51
CDK11A-202ENST00000356937 AMER1Q5JTC6 1135 aaPredicted RBP24.47■■□□□ 1.51
CDK11A-202ENST00000356937 CABP1Q9NZU7 370 aa24.47■■□□□ 1.51
CDK11A-202ENST00000356937 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
CDK11A-202ENST00000356937 CCDC184Q52MB2 194 aa24.46■■□□□ 1.51
CDK11A-202ENST00000356937 ANKRD36BQ8N2N9 1353 aa24.46■■□□□ 1.51
CDK11A-202ENST00000356937 NSD3Q9BZ95 1437 aa24.45■■□□□ 1.5
CDK11A-202ENST00000356937 ADGRB2O60241 1585 aa24.45■■□□□ 1.5
CDK11A-202ENST00000356937 NUDT16Q96DE0 195 aaKnown RBP24.45■■□□□ 1.5
CDK11A-202ENST00000356937 RBM33Q96EV2 1170 aaKnown RBP24.44■■□□□ 1.5
CDK11A-202ENST00000356937 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
CDK11A-202ENST00000356937 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
CDK11A-202ENST00000356937 MRS2Q9HD23 443 aa24.42■■□□□ 1.5
CDK11A-202ENST00000356937 TERF2IPQ9NYB0 399 aa24.42■■□□□ 1.5
CDK11A-202ENST00000356937 A0A1W2PP64 1363 aa24.42■■□□□ 1.5
CDK11A-202ENST00000356937 MYBBP1AQ9BQG0 1328 aaKnown RBP24.41■■□□□ 1.5
CDK11A-202ENST00000356937 MYT1Q01538 1121 aa24.41■■□□□ 1.5
CDK11A-202ENST00000356937 PRR36Q9H6K5 1346 aa24.4■■□□□ 1.5
CDK11A-202ENST00000356937 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
CDK11A-202ENST00000356937 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
CDK11A-202ENST00000356937 CCDC61Q9Y6R9 512 aa24.4■■□□□ 1.5
CDK11A-202ENST00000356937 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.49
CDK11A-202ENST00000356937 STRCQ7RTU9 1775 aa24.38■■□□□ 1.49
CDK11A-202ENST00000356937 NPC1L1Q9UHC9 1359 aa24.38■■□□□ 1.49
CDK11A-202ENST00000356937 ATP7BP35670 1465 aa24.38■■□□□ 1.49
CDK11A-202ENST00000356937 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
CDK11A-202ENST00000356937 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
CDK11A-202ENST00000356937 C14orf37Q86TY3 774 aa24.35■■□□□ 1.49
CDK11A-202ENST00000356937 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
CDK11A-202ENST00000356937 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
CDK11A-202ENST00000356937 NLRP13Q86W25 1043 aa24.33■■□□□ 1.49
CDK11A-202ENST00000356937 USP32Q8NFA0 1604 aa24.31■■□□□ 1.48
CDK11A-202ENST00000356937 FAM9BQ8IZU0 186 aa24.31■■□□□ 1.48
CDK11A-202ENST00000356937 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
CDK11A-202ENST00000356937 RGPD8O14715 1765 aaPredicted RBP24.3■■□□□ 1.48
CDK11A-202ENST00000356937 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
CDK11A-202ENST00000356937 CDC42BPGQ6DT37 1551 aa24.29■■□□□ 1.48
CDK11A-202ENST00000356937 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
CDK11A-202ENST00000356937 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
CDK11A-202ENST00000356937 STRCP1A6NGW2 1772 aa24.29■■□□□ 1.48
CDK11A-202ENST00000356937 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
CDK11A-202ENST00000356937 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
CDK11A-202ENST00000356937 CPSF1Q10570 1443 aaKnown RBP24.29■■□□□ 1.48
CDK11A-202ENST00000356937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.28■■□□□ 1.48
CDK11A-202ENST00000356937 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
CDK11A-202ENST00000356937 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
CDK11A-202ENST00000356937 PMFBP1Q8TBY8 1022 aa24.27■■□□□ 1.48
CDK11A-202ENST00000356937 ITSN1Q15811 1721 aa24.26■■□□□ 1.47
CDK11A-202ENST00000356937 PLEKHG3A1L390 1219 aa24.26■■□□□ 1.47
CDK11A-202ENST00000356937 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
CDK11A-202ENST00000356937 ACEP12821 1306 aa24.26■■□□□ 1.47
CDK11A-202ENST00000356937 FYB1O15117 783 aa24.25■■□□□ 1.47
CDK11A-202ENST00000356937 NSD2O96028 1365 aa24.25■■□□□ 1.47
CDK11A-202ENST00000356937 ZNF692Q9BU19 519 aaPredicted RBP24.24■■□□□ 1.47
CDK11A-202ENST00000356937 ANKARQ7Z5J8 1434 aa24.24■■□□□ 1.47
CDK11A-202ENST00000356937 AKAP12Q02952 1782 aa24.24■■□□□ 1.47
CDK11A-202ENST00000356937 EDC4Q6P2E9 1401 aaKnown RBP24.22■■□□□ 1.47
CDK11A-202ENST00000356937 TMEM94Q12767 1356 aa24.22■■□□□ 1.47
CDK11A-202ENST00000356937 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
CDK11A-202ENST00000356937 MON2Q7Z3U7 1717 aa24.22■■□□□ 1.47
CDK11A-202ENST00000356937 NGDNQ8NEJ9 315 aaKnown RBP24.21■■□□□ 1.47
CDK11A-202ENST00000356937 KIF20BQ96Q89 1820 aa24.2■■□□□ 1.46
CDK11A-202ENST00000356937 CENPBP07199 599 aaPredicted RBP24.2■■□□□ 1.46
CDK11A-202ENST00000356937 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
CDK11A-202ENST00000356937 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
CDK11A-202ENST00000356937 NME9Q86XW9 330 aa24.17■■□□□ 1.46
CDK11A-202ENST00000356937 DMRT2Q9Y5R5 561 aa24.17■■□□□ 1.46
CDK11A-202ENST00000356937 ANKRD26Q9UPS8 1709 aa24.16■■□□□ 1.46
CDK11A-202ENST00000356937 USP6P35125 1406 aa24.16■■□□□ 1.46
CDK11A-202ENST00000356937 ESCO1Q5FWF5 840 aa24.15■■□□□ 1.46
CDK11A-202ENST00000356937 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms