RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
SIRPA-201ENST00000356025 DIAPH1O60610 1272 aaKnown RBP15.46■□□□□ 0.07
SIRPA-201ENST00000356025 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
SIRPA-201ENST00000356025 PDZRN3Q9UPQ7 1066 aa15.46■□□□□ 0.07
SIRPA-201ENST00000356025 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.07
SIRPA-201ENST00000356025 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
SIRPA-201ENST00000356025 CDK19Q9BWU1 502 aa15.45■□□□□ 0.06
SIRPA-201ENST00000356025 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
SIRPA-201ENST00000356025 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
SIRPA-201ENST00000356025 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
SIRPA-201ENST00000356025 PMFBP1Q8TBY8 1022 aa15.45■□□□□ 0.06
SIRPA-201ENST00000356025 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
SIRPA-201ENST00000356025 PRKAR2BP31323 418 aa15.44■□□□□ 0.06
SIRPA-201ENST00000356025 SEC24BO95487 1268 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 TPRNQ4KMQ1 711 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 PCDHB15Q9Y5E8 787 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 RRS1Q15050 365 aaKnown RBP15.43■□□□□ 0.06
SIRPA-201ENST00000356025 ARHGEF5Q12774 1597 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 CHD1O14646 1710 aa15.43■□□□□ 0.06
SIRPA-201ENST00000356025 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
SIRPA-201ENST00000356025 ATP10AO60312 1499 aa15.42■□□□□ 0.06
SIRPA-201ENST00000356025 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
SIRPA-201ENST00000356025 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
SIRPA-201ENST00000356025 DCTN1Q14203 1278 aa15.41■□□□□ 0.06
SIRPA-201ENST00000356025 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
SIRPA-201ENST00000356025 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
SIRPA-201ENST00000356025 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
SIRPA-201ENST00000356025 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
SIRPA-201ENST00000356025 NUTM2GQ5VZR2 741 aa15.4■□□□□ 0.06
SIRPA-201ENST00000356025 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
SIRPA-201ENST00000356025 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
SIRPA-201ENST00000356025 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
SIRPA-201ENST00000356025 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 CROCC2H7BZ55 1655 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
SIRPA-201ENST00000356025 GSE1Q14687 1217 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 MAST1Q9Y2H9 1570 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
SIRPA-201ENST00000356025 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
SIRPA-201ENST00000356025 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
SIRPA-201ENST00000356025 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
SIRPA-201ENST00000356025 NME9Q86XW9 330 aa15.36■□□□□ 0.05
SIRPA-201ENST00000356025 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
SIRPA-201ENST00000356025 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
SIRPA-201ENST00000356025 FYB1O15117 783 aa15.35■□□□□ 0.05
SIRPA-201ENST00000356025 MYO5CQ9NQX4 1742 aa15.35■□□□□ 0.05
SIRPA-201ENST00000356025 COG3Q96JB2 828 aa15.34■□□□□ 0.05
SIRPA-201ENST00000356025 SLC26A8Q96RN1 970 aa15.34■□□□□ 0.05
SIRPA-201ENST00000356025 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
SIRPA-201ENST00000356025 TRPM1Q7Z4N2 1603 aa15.33■□□□□ 0.05
SIRPA-201ENST00000356025 KDM2BQ8NHM5 1336 aa15.33■□□□□ 0.05
SIRPA-201ENST00000356025 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.05
SIRPA-201ENST00000356025 TRIM27P14373 513 aa15.33■□□□□ 0.05
SIRPA-201ENST00000356025 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.05
SIRPA-201ENST00000356025 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
SIRPA-201ENST00000356025 MIS18AQ9NYP9 233 aa15.33■□□□□ 0.04
SIRPA-201ENST00000356025 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
SIRPA-201ENST00000356025 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
SIRPA-201ENST00000356025 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
SIRPA-201ENST00000356025 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
SIRPA-201ENST00000356025 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
SIRPA-201ENST00000356025 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
SIRPA-201ENST00000356025 DDX19BQ9UMR2 479 aa15.31■□□□□ 0.04
SIRPA-201ENST00000356025 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
SIRPA-201ENST00000356025 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
SIRPA-201ENST00000356025 HSCBQ8IWL3 235 aa15.31■□□□□ 0.04
SIRPA-201ENST00000356025 SLC52A1Q9NWF4 448 aa15.31■□□□□ 0.04
SIRPA-201ENST00000356025 PRDM15P57071 1507 aaPredicted RBP15.31■□□□□ 0.04
SIRPA-201ENST00000356025 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
SIRPA-201ENST00000356025 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
SIRPA-201ENST00000356025 EIF2AK4Q9P2K8 1649 aaKnown RBP15.3■□□□□ 0.04
SIRPA-201ENST00000356025 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
SIRPA-201ENST00000356025 ERVK-7P63135 1459 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 ABCC1P33527 1531 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 NPATQ14207 1427 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
SIRPA-201ENST00000356025 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
SIRPA-201ENST00000356025 SULT6B1Q6IMI4 303 aa15.28■□□□□ 0.04
SIRPA-201ENST00000356025 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
SIRPA-201ENST00000356025 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
SIRPA-201ENST00000356025 RPGRIP1LQ68CZ1 1315 aa15.27■□□□□ 0.04
SIRPA-201ENST00000356025 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
SIRPA-201ENST00000356025 PTPRTO14522 1441 aa15.27■□□□□ 0.04
SIRPA-201ENST00000356025 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
SIRPA-201ENST00000356025 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
SIRPA-201ENST00000356025 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.03
SIRPA-201ENST00000356025 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
SIRPA-201ENST00000356025 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
SIRPA-201ENST00000356025 MCM10Q7L590 875 aa15.26■□□□□ 0.03
SIRPA-201ENST00000356025 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
SIRPA-201ENST00000356025 AMPHP49418 695 aa15.25■□□□□ 0.03
SIRPA-201ENST00000356025 POLR3AO14802 1390 aaPredicted RBP15.25■□□□□ 0.03
SIRPA-201ENST00000356025 TWISTNBQ3B726 338 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms