RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 PLEKHH1Q9ULM0 1364 aa18.69■□□□□ 0.58
HOXA1-202ENST00000355633 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
HOXA1-202ENST00000355633 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
HOXA1-202ENST00000355633 PIK3R4Q99570 1358 aa18.66■□□□□ 0.58
HOXA1-202ENST00000355633 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
HOXA1-202ENST00000355633 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
HOXA1-202ENST00000355633 CABP2Q9NPB3 220 aa18.65■□□□□ 0.58
HOXA1-202ENST00000355633 AMOTL2Q9Y2J4 779 aa18.65■□□□□ 0.58
HOXA1-202ENST00000355633 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
HOXA1-202ENST00000355633 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.58
HOXA1-202ENST00000355633 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
HOXA1-202ENST00000355633 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
HOXA1-202ENST00000355633 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
HOXA1-202ENST00000355633 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
HOXA1-202ENST00000355633 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
HOXA1-202ENST00000355633 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
HOXA1-202ENST00000355633 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
HOXA1-202ENST00000355633 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
HOXA1-202ENST00000355633 SLC12A5Q9H2X9 1139 aa18.61■□□□□ 0.57
HOXA1-202ENST00000355633 NINLQ9Y2I6 1382 aa18.6■□□□□ 0.57
HOXA1-202ENST00000355633 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
HOXA1-202ENST00000355633 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.59■□□□□ 0.57
HOXA1-202ENST00000355633 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
HOXA1-202ENST00000355633 RALBP1Q15311 655 aa18.59■□□□□ 0.57
HOXA1-202ENST00000355633 YTHDC1Q96MU7 727 aaKnown RBP18.59■□□□□ 0.57
HOXA1-202ENST00000355633 ADGRB2O60241 1585 aa18.58■□□□□ 0.57
HOXA1-202ENST00000355633 KCNA6P17658 529 aa18.57■□□□□ 0.56
HOXA1-202ENST00000355633 CC2D1BQ5T0F9 858 aaKnown RBP18.57■□□□□ 0.56
HOXA1-202ENST00000355633 PARD3Q8TEW0 1356 aa18.57■□□□□ 0.56
HOXA1-202ENST00000355633 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
HOXA1-202ENST00000355633 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
HOXA1-202ENST00000355633 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
HOXA1-202ENST00000355633 LMTK3Q96Q04 1460 aa18.55■□□□□ 0.56
HOXA1-202ENST00000355633 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
HOXA1-202ENST00000355633 HSPA2P54652 639 aa18.54■□□□□ 0.56
HOXA1-202ENST00000355633 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
HOXA1-202ENST00000355633 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
HOXA1-202ENST00000355633 CCDC184Q52MB2 194 aa18.53■□□□□ 0.56
HOXA1-202ENST00000355633 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
HOXA1-202ENST00000355633 TERF2IPQ9NYB0 399 aa18.51■□□□□ 0.55
HOXA1-202ENST00000355633 CABP1Q9NZU7 370 aa18.51■□□□□ 0.55
HOXA1-202ENST00000355633 USP32Q8NFA0 1604 aa18.51■□□□□ 0.55
HOXA1-202ENST00000355633 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
HOXA1-202ENST00000355633 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
HOXA1-202ENST00000355633 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
HOXA1-202ENST00000355633 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
HOXA1-202ENST00000355633 ATP7BP35670 1465 aa18.49■□□□□ 0.55
HOXA1-202ENST00000355633 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
HOXA1-202ENST00000355633 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
HOXA1-202ENST00000355633 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
HOXA1-202ENST00000355633 CGNL1Q0VF96 1302 aa18.47■□□□□ 0.55
HOXA1-202ENST00000355633 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
HOXA1-202ENST00000355633 NLRP13Q86W25 1043 aa18.47■□□□□ 0.55
HOXA1-202ENST00000355633 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
HOXA1-202ENST00000355633 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
HOXA1-202ENST00000355633 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
HOXA1-202ENST00000355633 TOPAZ1Q8N9V7 1692 aa18.45■□□□□ 0.54
HOXA1-202ENST00000355633 CDC42BPGQ6DT37 1551 aa18.44■□□□□ 0.54
HOXA1-202ENST00000355633 NSD2O96028 1365 aa18.44■□□□□ 0.54
HOXA1-202ENST00000355633 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
HOXA1-202ENST00000355633 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
HOXA1-202ENST00000355633 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
HOXA1-202ENST00000355633 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
HOXA1-202ENST00000355633 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
HOXA1-202ENST00000355633 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
HOXA1-202ENST00000355633 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
HOXA1-202ENST00000355633 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
HOXA1-202ENST00000355633 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
HOXA1-202ENST00000355633 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
HOXA1-202ENST00000355633 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
HOXA1-202ENST00000355633 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
HOXA1-202ENST00000355633 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
HOXA1-202ENST00000355633 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
HOXA1-202ENST00000355633 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.54
HOXA1-202ENST00000355633 PROSER2Q86WR7 435 aaPredicted RBP18.39■□□□□ 0.53
HOXA1-202ENST00000355633 KIF20BQ96Q89 1820 aa18.39■□□□□ 0.53
HOXA1-202ENST00000355633 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
HOXA1-202ENST00000355633 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
HOXA1-202ENST00000355633 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
HOXA1-202ENST00000355633 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
HOXA1-202ENST00000355633 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
HOXA1-202ENST00000355633 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
HOXA1-202ENST00000355633 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
HOXA1-202ENST00000355633 ACEP12821 1306 aa18.36■□□□□ 0.53
HOXA1-202ENST00000355633 FYB1O15117 783 aa18.36■□□□□ 0.53
HOXA1-202ENST00000355633 GGNBP2Q9H3C7 697 aa18.36■□□□□ 0.53
HOXA1-202ENST00000355633 MYT1Q01538 1121 aa18.35■□□□□ 0.53
HOXA1-202ENST00000355633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
HOXA1-202ENST00000355633 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.53
HOXA1-202ENST00000355633 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
HOXA1-202ENST00000355633 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
HOXA1-202ENST00000355633 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.52
HOXA1-202ENST00000355633 USP6P35125 1406 aa18.32■□□□□ 0.52
HOXA1-202ENST00000355633 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
HOXA1-202ENST00000355633 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
HOXA1-202ENST00000355633 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
HOXA1-202ENST00000355633 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
HOXA1-202ENST00000355633 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
HOXA1-202ENST00000355633 TTC21BQ7Z4L5 1316 aa18.29■□□□□ 0.52
HOXA1-202ENST00000355633 NME9Q86XW9 330 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms