RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 HSP90B2PQ58FF3 399 aa9.48□□□□□ -0.89
VANGL1-202ENST00000355485 KIF7Q2M1P5 1343 aa9.48□□□□□ -0.89
VANGL1-202ENST00000355485 TSPYL1Q9H0U9 437 aa9.48□□□□□ -0.89
VANGL1-202ENST00000355485 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 AKAP17AQ02040 695 aaKnown RBP9.47□□□□□ -0.89
VANGL1-202ENST00000355485 ZRSR2Q15696 482 aaKnown RBP9.47□□□□□ -0.89
VANGL1-202ENST00000355485 CNTLNQ9NXG0 1405 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 ZSCAN30Q86W11 494 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 CCDC7Q96M83 1385 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 CT47A1Q5JQC4 288 aaPredicted RBP9.47□□□□□ -0.89
VANGL1-202ENST00000355485 TPM1P09493 284 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 CCDC112Q8NEF3 446 aa9.47□□□□□ -0.89
VANGL1-202ENST00000355485 FAM193AP78312 1265 aa9.46□□□□□ -0.89
VANGL1-202ENST00000355485 NGEFQ8N5V2 710 aa9.46□□□□□ -0.89
VANGL1-202ENST00000355485 POLR3GO15318 223 aaPredicted RBP9.46□□□□□ -0.89
VANGL1-202ENST00000355485 CCDC47Q96A33 483 aaKnown RBP9.46□□□□□ -0.89
VANGL1-202ENST00000355485 STK31Q9BXU1 1019 aa9.46□□□□□ -0.89
VANGL1-202ENST00000355485 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.89
VANGL1-202ENST00000355485 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.89
VANGL1-202ENST00000355485 INTS3Q68E01 1043 aaKnown RBP9.46□□□□□ -0.89
VANGL1-202ENST00000355485 HMGN5P82970 282 aaKnown RBP9.46□□□□□ -0.9
VANGL1-202ENST00000355485 LRRFIP1Q32MZ4 808 aaKnown RBP9.46□□□□□ -0.9
VANGL1-202ENST00000355485 ZNF526Q8TF50 670 aaPredicted RBP9.46□□□□□ -0.9
VANGL1-202ENST00000355485 CENPHQ9H3R5 247 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 ERCC6Q03468 1493 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 RAD21O60216 631 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 CEBPZQ03701 1054 aaKnown RBP9.46□□□□□ -0.9
VANGL1-202ENST00000355485 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 TMX1Q9H3N1 280 aa9.46□□□□□ -0.9
VANGL1-202ENST00000355485 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
VANGL1-202ENST00000355485 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
VANGL1-202ENST00000355485 FIBPO43427 364 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 EVA1CP58658 441 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 SYCE3A1L190 88 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 ACBD3Q9H3P7 528 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 DDX19BQ9UMR2 479 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 AXDND1Q5T1B0 1012 aaPredicted RBP9.45□□□□□ -0.9
VANGL1-202ENST00000355485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.45□□□□□ -0.9
VANGL1-202ENST00000355485 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
VANGL1-202ENST00000355485 NUP155O75694 1391 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 NAP1L1P55209 391 aaKnown RBP9.44□□□□□ -0.9
VANGL1-202ENST00000355485 ZBTB9Q96C00 473 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 CDC45O75419 566 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
VANGL1-202ENST00000355485 VGLL3A8MV65 326 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
VANGL1-202ENST00000355485 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 EID1Q9Y6B2 187 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 USP47Q96K76 1375 aa9.44□□□□□ -0.9
VANGL1-202ENST00000355485 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
VANGL1-202ENST00000355485 REC8O95072 547 aa9.43□□□□□ -0.9
VANGL1-202ENST00000355485 ZNF830Q96NB3 372 aaPredicted RBP9.43□□□□□ -0.9
VANGL1-202ENST00000355485 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
VANGL1-202ENST00000355485 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
VANGL1-202ENST00000355485 FAM177BA6PVY3 158 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 RRAGDQ9NQL2 400 aaPredicted RBP9.42□□□□□ -0.9
VANGL1-202ENST00000355485 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 CDR1P51861 262 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 NEK4P51957 841 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
VANGL1-202ENST00000355485 RUSC2Q8N2Y8 1516 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 STK11IPQ8N1F8 1099 aa9.42□□□□□ -0.9
VANGL1-202ENST00000355485 MAP4K4O95819 1239 aaPredicted RBP9.41□□□□□ -0.9
VANGL1-202ENST00000355485 TAF3Q5VWG9 929 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 LETM1O95202 739 aaPredicted RBP9.41□□□□□ -0.9
VANGL1-202ENST00000355485 AAMPQ13685 434 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 MLECQ14165 292 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
VANGL1-202ENST00000355485 SRRTQ9BXP5 876 aaKnown RBP9.41□□□□□ -0.9
VANGL1-202ENST00000355485 SSFA2P28290 1259 aa9.41□□□□□ -0.9
VANGL1-202ENST00000355485 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
VANGL1-202ENST00000355485 C20orf194Q5TEA3 1177 aa9.4□□□□□ -0.9
VANGL1-202ENST00000355485 IPO7O95373 1038 aaKnown RBP9.4□□□□□ -0.9
VANGL1-202ENST00000355485 SYNE3Q6ZMZ3 975 aa9.4□□□□□ -0.9
VANGL1-202ENST00000355485 CCDC73Q6ZRK6 1079 aa9.4□□□□□ -0.9
VANGL1-202ENST00000355485 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
VANGL1-202ENST00000355485 GIMAP7Q8NHV1 300 aa9.4□□□□□ -0.91
VANGL1-202ENST00000355485 LTV1Q96GA3 475 aaPredicted RBP9.4□□□□□ -0.91
VANGL1-202ENST00000355485 CAMK4Q16566 473 aa9.4□□□□□ -0.91
VANGL1-202ENST00000355485 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 RIPK4P57078 832 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 STK3Q13188 491 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
VANGL1-202ENST00000355485 DESP17661 470 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
VANGL1-202ENST00000355485 MBD3O95983 291 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 WDR70Q9NW82 654 aa9.39□□□□□ -0.91
VANGL1-202ENST00000355485 CCDC191Q8NCU4 936 aa9.38□□□□□ -0.91
VANGL1-202ENST00000355485 MROH2BQ7Z745 1585 aa9.38□□□□□ -0.91
VANGL1-202ENST00000355485 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 DHX16O60231 1041 aaKnown RBP9.38□□□□□ -0.91
VANGL1-202ENST00000355485 ERCC4Q92889 916 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms