RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 RLBP1P12271 317 aa18.65■□□□□ 0.58
GFRA1-201ENST00000355422 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
GFRA1-201ENST00000355422 PCDHB15Q9Y5E8 787 aa18.65■□□□□ 0.58
GFRA1-201ENST00000355422 NOS1P29475 1434 aa18.65■□□□□ 0.58
GFRA1-201ENST00000355422 KIF1BO60333 1816 aa18.64■□□□□ 0.57
GFRA1-201ENST00000355422 NRXN1Q9ULB1 1477 aa18.64■□□□□ 0.57
GFRA1-201ENST00000355422 SHPRHQ149N8 1683 aa18.63■□□□□ 0.57
GFRA1-201ENST00000355422 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
GFRA1-201ENST00000355422 PMFBP1Q8TBY8 1022 aa18.63■□□□□ 0.57
GFRA1-201ENST00000355422 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
GFRA1-201ENST00000355422 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
GFRA1-201ENST00000355422 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
GFRA1-201ENST00000355422 ADGRL1O94910 1474 aa18.62■□□□□ 0.57
GFRA1-201ENST00000355422 MTHFSP49914 203 aa18.62■□□□□ 0.57
GFRA1-201ENST00000355422 IFT172Q9UG01 1749 aa18.62■□□□□ 0.57
GFRA1-201ENST00000355422 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
GFRA1-201ENST00000355422 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
GFRA1-201ENST00000355422 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
GFRA1-201ENST00000355422 TMEM132EQ6IEE7 984 aa18.61■□□□□ 0.57
GFRA1-201ENST00000355422 BECN1Q14457 450 aa18.61■□□□□ 0.57
GFRA1-201ENST00000355422 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
GFRA1-201ENST00000355422 ABCA9Q8IUA7 1624 aa18.61■□□□□ 0.57
GFRA1-201ENST00000355422 SLKQ9H2G2 1235 aaPredicted RBP18.6■□□□□ 0.57
GFRA1-201ENST00000355422 NLRP1Q9C000 1473 aa18.6■□□□□ 0.57
GFRA1-201ENST00000355422 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
GFRA1-201ENST00000355422 AAMPQ13685 434 aa18.59■□□□□ 0.57
GFRA1-201ENST00000355422 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
GFRA1-201ENST00000355422 PPRC1Q5VV67 1664 aaKnown RBP18.58■□□□□ 0.57
GFRA1-201ENST00000355422 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
GFRA1-201ENST00000355422 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
GFRA1-201ENST00000355422 CCDC27Q2M243 656 aa18.57■□□□□ 0.56
GFRA1-201ENST00000355422 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
GFRA1-201ENST00000355422 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
GFRA1-201ENST00000355422 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
GFRA1-201ENST00000355422 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
GFRA1-201ENST00000355422 POGKQ9P215 609 aa18.55■□□□□ 0.56
GFRA1-201ENST00000355422 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
GFRA1-201ENST00000355422 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
GFRA1-201ENST00000355422 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
GFRA1-201ENST00000355422 U2AF1L5P0DN76 240 aaPredicted RBP18.54■□□□□ 0.56
GFRA1-201ENST00000355422 U2AF1Q01081 240 aaKnown RBP eCLIP18.54■□□□□ 0.56
GFRA1-201ENST00000355422 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
GFRA1-201ENST00000355422 ADGRB1O14514 1584 aa18.53■□□□□ 0.56
GFRA1-201ENST00000355422 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.56
GFRA1-201ENST00000355422 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.56
GFRA1-201ENST00000355422 LMTK2Q8IWU2 1503 aa18.52■□□□□ 0.56
GFRA1-201ENST00000355422 TBC1D2Q9BYX2 928 aa18.51■□□□□ 0.55
GFRA1-201ENST00000355422 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
GFRA1-201ENST00000355422 KIDINS220Q9ULH0 1771 aa18.51■□□□□ 0.55
GFRA1-201ENST00000355422 GGT6Q6P531 493 aa18.51■□□□□ 0.55
GFRA1-201ENST00000355422 NPATQ14207 1427 aa18.51■□□□□ 0.55
GFRA1-201ENST00000355422 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
GFRA1-201ENST00000355422 ZKSCAN2Q63HK3 967 aa18.5■□□□□ 0.55
GFRA1-201ENST00000355422 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
GFRA1-201ENST00000355422 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
GFRA1-201ENST00000355422 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
GFRA1-201ENST00000355422 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
GFRA1-201ENST00000355422 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
GFRA1-201ENST00000355422 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
GFRA1-201ENST00000355422 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
GFRA1-201ENST00000355422 PPLO60437 1756 aa18.48■□□□□ 0.55
GFRA1-201ENST00000355422 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
GFRA1-201ENST00000355422 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
GFRA1-201ENST00000355422 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
GFRA1-201ENST00000355422 SPRYD3Q8NCJ5 442 aa18.47■□□□□ 0.55
GFRA1-201ENST00000355422 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
GFRA1-201ENST00000355422 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
GFRA1-201ENST00000355422 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
GFRA1-201ENST00000355422 ASXL2Q76L83 1435 aa18.46■□□□□ 0.55
GFRA1-201ENST00000355422 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
GFRA1-201ENST00000355422 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
GFRA1-201ENST00000355422 NSD2O96028 1365 aa18.44■□□□□ 0.54
GFRA1-201ENST00000355422 TRIM27P14373 513 aa18.44■□□□□ 0.54
GFRA1-201ENST00000355422 PUS7Q96PZ0 661 aaKnown RBP18.44■□□□□ 0.54
GFRA1-201ENST00000355422 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
GFRA1-201ENST00000355422 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
GFRA1-201ENST00000355422 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
GFRA1-201ENST00000355422 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
GFRA1-201ENST00000355422 ADGRB2O60241 1585 aa18.43■□□□□ 0.54
GFRA1-201ENST00000355422 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
GFRA1-201ENST00000355422 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
GFRA1-201ENST00000355422 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 GLI2P10070 1586 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 CD109Q6YHK3 1445 aa18.42■□□□□ 0.54
GFRA1-201ENST00000355422 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
GFRA1-201ENST00000355422 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
GFRA1-201ENST00000355422 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
GFRA1-201ENST00000355422 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
GFRA1-201ENST00000355422 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
GFRA1-201ENST00000355422 DDX19BQ9UMR2 479 aa18.4■□□□□ 0.54
GFRA1-201ENST00000355422 ATF7IPQ6VMQ6 1270 aa18.39■□□□□ 0.54
GFRA1-201ENST00000355422 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
GFRA1-201ENST00000355422 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
GFRA1-201ENST00000355422 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
GFRA1-201ENST00000355422 L1TD1Q5T7N2 865 aaKnown RBP18.37■□□□□ 0.53
GFRA1-201ENST00000355422 STK26Q9P289 416 aa18.37■□□□□ 0.53
GFRA1-201ENST00000355422 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms