RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ANKRD62A6NC57 917 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 PLIN1O60240 522 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 SMARCE1Q969G3 411 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 SMC2O95347 1197 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 EVC2Q86UK5 1308 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 HNRNPMP52272 730 aaKnown RBP eCLIP6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 TSPYL1Q9H0U9 437 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 PDE4AP27815 886 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 PANK3Q9H999 370 aa6.95□□□□□ -1.3
SRGAP1-201ENST00000355086 NEUROD6Q96NK8 337 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 ANKRD18AQ8IVF6 992 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 KDM4AO75164 1064 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 HSP90AB4PQ58FF6 505 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 MYBBP1AQ9BQG0 1328 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 SLC3A2P08195 630 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 GOLGA6L10A6NI86 522 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
SRGAP1-201ENST00000355086 BRPF1P55201 1214 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 PSMA5P28066 241 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 AXDND1Q5T1B0 1012 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 HSP90AB3PQ58FF7 597 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 AIMP1Q12904 312 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 RSPH4AQ5TD94 716 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 CUX2O14529 1486 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 NINLQ9Y2I6 1382 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 CNTROBQ8N137 903 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 RRP1P56182 461 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 RIPK4P57078 832 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 PDCL3Q9H2J4 239 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 LEKR1Q6ZMV7 388 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 TBC1D2BQ9UPU7 963 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 UACAQ9BZF9 1416 aa6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 CT47B1P0C2W7 299 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-201ENST00000355086 KRT18P05783 430 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 RAPGEF4Q8WZA2 1011 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 RAB3GAP2Q9H2M9 1393 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 ATP2B2Q01814 1243 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 DZIP1LQ8IYY4 767 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 DEF6Q9H4E7 631 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 CCP110O43303 1012 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 ATP2B1P20020 1258 aa6.92□□□□□ -1.3
SRGAP1-201ENST00000355086 ZNHIT6Q9NWK9 470 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 GBP2P32456 591 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 LUC7LQ9NQ29 371 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 DIAPH1O60610 1272 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 TRIM5Q9C035 493 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 ATF3P18847 181 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 CCDC66A2RUB6 948 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 KINO60870 393 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 RB1CC1Q8TDY2 1594 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 EZRP15311 586 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 STIM1Q13586 685 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 ST20-MTHFSA0A0A6YYL1 179 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 L3MBTL2Q969R5 705 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 MYO15BQ96JP2 1530 aa6.91□□□□□ -1.3
SRGAP1-201ENST00000355086 VGFO15240 615 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 FAM177BA6PVY3 158 aa6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 ZHX3Q9H4I2 956 aa6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 APAF1O14727 1248 aa6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 KIF6Q6ZMV9 814 aa6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 EXOC6Q8TAG9 804 aa6.9□□□□□ -1.3
SRGAP1-201ENST00000355086 GOLGA6L7A0A1B0GV03 622 aa6.9□□□□□ -1.31
SRGAP1-201ENST00000355086 DESP17661 470 aa6.9□□□□□ -1.31
SRGAP1-201ENST00000355086 KIAA0754O94854 1291 aa6.9□□□□□ -1.31
SRGAP1-201ENST00000355086 LETM1O95202 739 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-201ENST00000355086 NEBLO76041 1014 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 FSD1Q9BTV5 496 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 TXLNBQ8N3L3 684 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 C22orf23Q9BZE7 217 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 MTERF4Q7Z6M4 381 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 CLASRPQ8N2M8 674 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC144AA2RUR9 1427 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 RNF214Q8ND24 703 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 MATR3P43243 847 aaKnown RBP eCLIP6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 PIP4K2AP48426 406 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 KIF7Q2M1P5 1343 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 CCDC181Q5TID7 509 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 CENPHQ9H3R5 247 aa6.89□□□□□ -1.31
SRGAP1-201ENST00000355086 TANGO6Q9C0B7 1094 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 PDCP20941 246 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 FMNL2Q96PY5 1086 aa6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 MPHOSPH10O00566 681 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-201ENST00000355086 TTC39AQ5SRH9 613 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms