RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
COL13A1-201ENST00000354547 C8orf34Q49A92 452 aa25.32■■□□□ 1.64
COL13A1-201ENST00000354547 RUNDC1Q96C34 613 aa25.32■■□□□ 1.64
COL13A1-201ENST00000354547 NRXN1Q9ULB1 1477 aa25.32■■□□□ 1.64
COL13A1-201ENST00000354547 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
COL13A1-201ENST00000354547 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
COL13A1-201ENST00000354547 CGNL1Q0VF96 1302 aa25.31■■□□□ 1.64
COL13A1-201ENST00000354547 SBNO2Q9Y2G9 1366 aa25.31■■□□□ 1.64
COL13A1-201ENST00000354547 DDRGK1Q96HY6 314 aa25.31■■□□□ 1.64
COL13A1-201ENST00000354547 IFT172Q9UG01 1749 aa25.31■■□□□ 1.64
COL13A1-201ENST00000354547 TNNQ9UQP3 1299 aa25.3■■□□□ 1.64
COL13A1-201ENST00000354547 U2AF1L5P0DN76 240 aaPredicted RBP25.3■■□□□ 1.64
COL13A1-201ENST00000354547 U2AF1Q01081 240 aaKnown RBP eCLIP25.3■■□□□ 1.64
COL13A1-201ENST00000354547 POGZQ7Z3K3 1410 aa25.3■■□□□ 1.64
COL13A1-201ENST00000354547 CLUAP1Q96AJ1 413 aa25.29■■□□□ 1.64
COL13A1-201ENST00000354547 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
COL13A1-201ENST00000354547 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
COL13A1-201ENST00000354547 EVC2Q86UK5 1308 aa25.27■■□□□ 1.64
COL13A1-201ENST00000354547 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
COL13A1-201ENST00000354547 SRPK2P78362 688 aaKnown RBP25.27■■□□□ 1.64
COL13A1-201ENST00000354547 LMTK2Q8IWU2 1503 aa25.26■■□□□ 1.63
COL13A1-201ENST00000354547 IDI1Q13907 227 aa25.26■■□□□ 1.63
COL13A1-201ENST00000354547 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
COL13A1-201ENST00000354547 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
COL13A1-201ENST00000354547 U2SURPO15042 1029 aaKnown RBP25.24■■□□□ 1.63
COL13A1-201ENST00000354547 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
COL13A1-201ENST00000354547 RPGRIP1LQ68CZ1 1315 aa25.24■■□□□ 1.63
COL13A1-201ENST00000354547 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
COL13A1-201ENST00000354547 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
COL13A1-201ENST00000354547 PDE3AQ14432 1141 aa25.23■■□□□ 1.63
COL13A1-201ENST00000354547 ADGRB1O14514 1584 aa25.23■■□□□ 1.63
COL13A1-201ENST00000354547 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-201ENST00000354547 RLBP1P12271 317 aa25.21■■□□□ 1.63
COL13A1-201ENST00000354547 MYO3AQ8NEV4 1616 aa25.21■■□□□ 1.63
COL13A1-201ENST00000354547 MINK1Q8N4C8 1332 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-201ENST00000354547 PPLO60437 1756 aa25.21■■□□□ 1.63
COL13A1-201ENST00000354547 MLH3Q9UHC1 1453 aa25.2■■□□□ 1.63
COL13A1-201ENST00000354547 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.63
COL13A1-201ENST00000354547 ABCC3O15438 1527 aa25.2■■□□□ 1.62
COL13A1-201ENST00000354547 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
COL13A1-201ENST00000354547 TSR2Q969E8 191 aaKnown RBP25.18■■□□□ 1.62
COL13A1-201ENST00000354547 POGKQ9P215 609 aa25.16■■□□□ 1.62
COL13A1-201ENST00000354547 SHPRHQ149N8 1683 aa25.15■■□□□ 1.62
COL13A1-201ENST00000354547 PCDHB15Q9Y5E8 787 aa25.15■■□□□ 1.62
COL13A1-201ENST00000354547 WDR63Q8IWG1 891 aa25.15■■□□□ 1.62
COL13A1-201ENST00000354547 ANKRD36BQ8N2N9 1353 aa25.14■■□□□ 1.61
COL13A1-201ENST00000354547 SEC24BO95487 1268 aa25.13■■□□□ 1.61
COL13A1-201ENST00000354547 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
COL13A1-201ENST00000354547 GLI2P10070 1586 aa25.13■■□□□ 1.61
COL13A1-201ENST00000354547 FBXO31Q5XUX0 539 aaPredicted RBP25.13■■□□□ 1.61
COL13A1-201ENST00000354547 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
COL13A1-201ENST00000354547 TULP4Q9NRJ4 1543 aa25.12■■□□□ 1.61
COL13A1-201ENST00000354547 NFKBIBQ15653 356 aa25.12■■□□□ 1.61
COL13A1-201ENST00000354547 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
COL13A1-201ENST00000354547 MYH16Q9H6N6 1097 aa25.11■■□□□ 1.61
COL13A1-201ENST00000354547 A0A1W2PP64 1363 aa25.11■■□□□ 1.61
COL13A1-201ENST00000354547 ZC3H13Q5T200 1668 aaKnown RBP25.11■■□□□ 1.61
COL13A1-201ENST00000354547 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
COL13A1-201ENST00000354547 STAG3Q9UJ98 1225 aa25.1■■□□□ 1.61
COL13A1-201ENST00000354547 USP35Q9P2H5 1018 aa25.1■■□□□ 1.61
COL13A1-201ENST00000354547 CAMSAP1Q5T5Y3 1602 aa25.08■■□□□ 1.61
COL13A1-201ENST00000354547 YEATS2Q9ULM3 1422 aa25.08■■□□□ 1.61
COL13A1-201ENST00000354547 FBLN1P23142 703 aa25.08■■□□□ 1.61
COL13A1-201ENST00000354547 FTSJ3Q8IY81 847 aaKnown RBP25.07■■□□□ 1.6
COL13A1-201ENST00000354547 IQSEC2Q5JU85 1478 aa25.07■■□□□ 1.6
COL13A1-201ENST00000354547 EXOSC9Q06265 439 aaKnown RBP25.07■■□□□ 1.6
COL13A1-201ENST00000354547 NEXMIFQ5QGS0 1516 aa25.06■■□□□ 1.6
COL13A1-201ENST00000354547 CFAP74Q9C0B2 1584 aa25.06■■□□□ 1.6
COL13A1-201ENST00000354547 MAPK8IP3Q9UPT6 1336 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 NINLQ9Y2I6 1382 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 FYB1O15117 783 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 PMFBP1Q8TBY8 1022 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 SMC4Q9NTJ3 1288 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 SLC52A1Q9NWF4 448 aa25.05■■□□□ 1.6
COL13A1-201ENST00000354547 PDZRN3Q9UPQ7 1066 aa25.04■■□□□ 1.6
COL13A1-201ENST00000354547 CCDC27Q2M243 656 aa25.04■■□□□ 1.6
COL13A1-201ENST00000354547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.04■■□□□ 1.6
COL13A1-201ENST00000354547 ARHGEF28Q8N1W1 1705 aaKnown RBP25.03■■□□□ 1.6
COL13A1-201ENST00000354547 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
COL13A1-201ENST00000354547 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
COL13A1-201ENST00000354547 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
COL13A1-201ENST00000354547 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
COL13A1-201ENST00000354547 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
COL13A1-201ENST00000354547 CDK19Q9BWU1 502 aa25.01■■□□□ 1.59
COL13A1-201ENST00000354547 RIPK4P57078 832 aa25■■□□□ 1.59
COL13A1-201ENST00000354547 DZIP1LQ8IYY4 767 aaKnown RBP25■■□□□ 1.59
COL13A1-201ENST00000354547 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
COL13A1-201ENST00000354547 NSD2O96028 1365 aa25■■□□□ 1.59
COL13A1-201ENST00000354547 USP19O94966 1318 aa25■■□□□ 1.59
COL13A1-201ENST00000354547 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
COL13A1-201ENST00000354547 FRAT2O75474 233 aaPredicted RBP24.99■■□□□ 1.59
COL13A1-201ENST00000354547 RWDD1Q9H446 243 aaPredicted RBP24.99■■□□□ 1.59
COL13A1-201ENST00000354547 TRIM35Q9UPQ4 493 aa24.99■■□□□ 1.59
COL13A1-201ENST00000354547 MVPQ14764 893 aaKnown RBP24.99■■□□□ 1.59
COL13A1-201ENST00000354547 ABCC11Q96J66 1382 aa24.98■■□□□ 1.59
COL13A1-201ENST00000354547 MLECQ14165 292 aa24.98■■□□□ 1.59
COL13A1-201ENST00000354547 ITPRIPQ8IWB1 547 aa24.98■■□□□ 1.59
COL13A1-201ENST00000354547 PLEKHF1Q96S99 279 aa24.98■■□□□ 1.59
COL13A1-201ENST00000354547 WAPLQ7Z5K2 1190 aa24.98■■□□□ 1.59
COL13A1-201ENST00000354547 SSH1Q8WYL5 1049 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms