RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
DNMT3B-204ENST00000353855 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ERBINQ96RT1 1412 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ESF1Q9H501 851 aaKnown RBP17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 GGT6Q6P531 493 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 NRDCO43847 1150 aa17.39■□□□□ 0.37
DNMT3B-204ENST00000353855 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 NEK4P51957 841 aa17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
DNMT3B-204ENST00000353855 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 ABCC5O15440 1437 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
DNMT3B-204ENST00000353855 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 HMMRO75330 724 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 RABEP1Q15276 862 aa17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
DNMT3B-204ENST00000353855 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
DNMT3B-204ENST00000353855 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
DNMT3B-204ENST00000353855 MBD3O95983 291 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
DNMT3B-204ENST00000353855 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.37
DNMT3B-204ENST00000353855 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
DNMT3B-204ENST00000353855 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.36
DNMT3B-204ENST00000353855 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 CCDC27Q2M243 656 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
DNMT3B-204ENST00000353855 RLBP1P12271 317 aa17.31■□□□□ 0.36
DNMT3B-204ENST00000353855 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
DNMT3B-204ENST00000353855 NPHP1O15259 732 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
DNMT3B-204ENST00000353855 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 OFD1O75665 1012 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 WDR63Q8IWG1 891 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 HMOX1P09601 288 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 FIBPO43427 364 aa17.29■□□□□ 0.36
DNMT3B-204ENST00000353855 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
DNMT3B-204ENST00000353855 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
DNMT3B-204ENST00000353855 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 IGSF3O75054 1194 aa17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.35
DNMT3B-204ENST00000353855 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 GOLGA6L19H0YKK7 550 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 TRIM27P14373 513 aa17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
DNMT3B-204ENST00000353855 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 DYNC1I1O14576 645 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 USP25Q9UHP3 1055 aa17.25■□□□□ 0.35
DNMT3B-204ENST00000353855 BECN2A8MW95 431 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
DNMT3B-204ENST00000353855 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
DNMT3B-204ENST00000353855 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 PLB1Q6P1J6 1458 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 TPD52L1Q16890 204 aaPredicted RBP17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
DNMT3B-204ENST00000353855 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms