RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
SMPD4-201ENST00000351288 PTPRTO14522 1441 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 TCP11L2Q8N4U5 519 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 ERVK-7P63135 1459 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
SMPD4-201ENST00000351288 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
SMPD4-201ENST00000351288 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
SMPD4-201ENST00000351288 IGHDP01880 384 aa13.4□□□□□ -0.27
SMPD4-201ENST00000351288 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
SMPD4-201ENST00000351288 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
SMPD4-201ENST00000351288 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
SMPD4-201ENST00000351288 UHRF1BP1LA0JNW5 1464 aa13.39□□□□□ -0.27
SMPD4-201ENST00000351288 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
SMPD4-201ENST00000351288 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
SMPD4-201ENST00000351288 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
SMPD4-201ENST00000351288 TSR2Q969E8 191 aaKnown RBP13.38□□□□□ -0.27
SMPD4-201ENST00000351288 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
SMPD4-201ENST00000351288 C14orf93Q9H972 538 aaKnown RBP13.38□□□□□ -0.27
SMPD4-201ENST00000351288 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
SMPD4-201ENST00000351288 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
SMPD4-201ENST00000351288 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
SMPD4-201ENST00000351288 NPATQ14207 1427 aa13.37□□□□□ -0.27
SMPD4-201ENST00000351288 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
SMPD4-201ENST00000351288 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
SMPD4-201ENST00000351288 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
SMPD4-201ENST00000351288 E9PSI1 815 aa13.35□□□□□ -0.27
SMPD4-201ENST00000351288 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
SMPD4-201ENST00000351288 CEP152O94986 1710 aa13.35□□□□□ -0.27
SMPD4-201ENST00000351288 APBB1O00213 710 aa13.35□□□□□ -0.27
SMPD4-201ENST00000351288 TET3O43151 1660 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 LAMC1P11047 1609 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 RLBP1P12271 317 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 RIPK4P57078 832 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-201ENST00000351288 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
SMPD4-201ENST00000351288 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
SMPD4-201ENST00000351288 DIAPH1O60610 1272 aaKnown RBP13.33□□□□□ -0.28
SMPD4-201ENST00000351288 ITPRIPQ8IWB1 547 aa13.33□□□□□ -0.28
SMPD4-201ENST00000351288 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
SMPD4-201ENST00000351288 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
SMPD4-201ENST00000351288 MYOM1P52179 1685 aa13.33□□□□□ -0.28
SMPD4-201ENST00000351288 PPRC1Q5VV67 1664 aaKnown RBP13.33□□□□□ -0.28
SMPD4-201ENST00000351288 MS4A1P11836 297 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 SYNMO15061 1565 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 KDM5AP29375 1690 aaKnown RBP13.32□□□□□ -0.28
SMPD4-201ENST00000351288 KIDINS220Q9ULH0 1771 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 COG3Q96JB2 828 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SMPD4-201ENST00000351288 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-201ENST00000351288 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
SMPD4-201ENST00000351288 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
SMPD4-201ENST00000351288 NKTRP30414 1462 aaKnown RBP13.31□□□□□ -0.28
SMPD4-201ENST00000351288 C8orf34Q49A92 452 aa13.31□□□□□ -0.28
SMPD4-201ENST00000351288 NME9Q86XW9 330 aa13.31□□□□□ -0.28
SMPD4-201ENST00000351288 KIF1BO60333 1816 aa13.3□□□□□ -0.28
SMPD4-201ENST00000351288 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
SMPD4-201ENST00000351288 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
SMPD4-201ENST00000351288 ARXQ96QS3 562 aa13.3□□□□□ -0.28
SMPD4-201ENST00000351288 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
SMPD4-201ENST00000351288 A0A0G2JS52 829 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 SPRYD3Q8NCJ5 442 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 EMILIN1Q9Y6C2 1016 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
SMPD4-201ENST00000351288 AMPHP49418 695 aa13.28□□□□□ -0.28
SMPD4-201ENST00000351288 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
SMPD4-201ENST00000351288 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
SMPD4-201ENST00000351288 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
SMPD4-201ENST00000351288 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.28
SMPD4-201ENST00000351288 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
SMPD4-201ENST00000351288 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
SMPD4-201ENST00000351288 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
SMPD4-201ENST00000351288 DCTN1Q14203 1278 aa13.26□□□□□ -0.29
SMPD4-201ENST00000351288 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
SMPD4-201ENST00000351288 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-201ENST00000351288 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
SMPD4-201ENST00000351288 FYB1O15117 783 aa13.24□□□□□ -0.29
SMPD4-201ENST00000351288 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
SMPD4-201ENST00000351288 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMPD4-201ENST00000351288 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
SMPD4-201ENST00000351288 MYOM2P54296 1465 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 NLRP6P59044 892 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
SMPD4-201ENST00000351288 INSRP06213 1382 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
SMPD4-201ENST00000351288 IL27Q8NEV9 243 aa13.23□□□□□ -0.29
SMPD4-201ENST00000351288 FRMPD1Q5SYB0 1578 aa13.22□□□□□ -0.29
SMPD4-201ENST00000351288 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
SMPD4-201ENST00000351288 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
SMPD4-201ENST00000351288 NFKBIBQ15653 356 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms