RNA–Protein interactions for RNA: ENST00000351193.6

NMD3-201, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-201ENST00000351193 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.74
NMD3-201ENST00000351193 NINLQ9Y2I6 1382 aa10.4□□□□□ -0.74
NMD3-201ENST00000351193 SPAG9O60271 1321 aaKnown RBP10.4□□□□□ -0.74
NMD3-201ENST00000351193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■■■□□ 19.1
NMD3-201ENST00000351193 DUOX2Q9NRD8 1548 aa10.4□□□□□ -0.74
NMD3-201ENST00000351193 KIF3BO15066 747 aa10.4□□□□□ -0.74
NMD3-201ENST00000351193 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.74
NMD3-201ENST00000351193 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
NMD3-201ENST00000351193 U2SURPO15042 1029 aaKnown RBP10.39□□□□□ -0.75
NMD3-201ENST00000351193 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 KDM5AP29375 1690 aaKnown RBP10.39□□□□□ -0.75
NMD3-201ENST00000351193 ATP10AO60312 1499 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 FSD2A1L4K1 749 aa10.39□□□□□ -0.75
NMD3-201ENST00000351193 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
NMD3-201ENST00000351193 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
NMD3-201ENST00000351193 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
NMD3-201ENST00000351193 HSP90AA1P07900 732 aaKnown RBP10.38□□□□□ -0.75
NMD3-201ENST00000351193 NGEFQ8N5V2 710 aa10.38□□□□□ -0.75
NMD3-201ENST00000351193 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
NMD3-201ENST00000351193 GRPEL1Q9HAV7 217 aa10.38□□□□□ -0.75
NMD3-201ENST00000351193 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
NMD3-201ENST00000351193 VSIG10Q8N0Z9 540 aa10.37□□□□□ -0.75
NMD3-201ENST00000351193 CFAP53Q96M91 514 aa10.37□□□□□ -0.75
NMD3-201ENST00000351193 WDR63Q8IWG1 891 aa10.37□□□□□ -0.75
NMD3-201ENST00000351193 UGGT1Q9NYU2 1555 aa10.37□□□□□ -0.75
NMD3-201ENST00000351193 HSP90AB1P08238 724 aaKnown RBP10.36□□□□□ -0.75
NMD3-201ENST00000351193 MRE11P49959 708 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 TRIM27P14373 513 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 CLCN1P35523 988 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 TRIM44Q96DX7 344 aaPredicted RBP10.36□□□□□ -0.75
NMD3-201ENST00000351193 HSP90AA2PQ14568 343 aaPredicted RBP10.36□□□□□ -0.75
NMD3-201ENST00000351193 SSH1Q8WYL5 1049 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
NMD3-201ENST00000351193 SCAPERQ9BY12 1400 aa10.36□□□□□ -0.75
NMD3-201ENST00000351193 CEP152O94986 1710 aa10.35□□□□□ -0.75
NMD3-201ENST00000351193 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
NMD3-201ENST00000351193 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
NMD3-201ENST00000351193 TNPO1Q92973 898 aaKnown RBP10.35□□□□□ -0.75
NMD3-201ENST00000351193 GAS2L3Q86XJ1 694 aa10.34□□□□□ -0.75
NMD3-201ENST00000351193 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
NMD3-201ENST00000351193 SPHKAPQ2M3C7 1700 aa10.34□□□□□ -0.75
NMD3-201ENST00000351193 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
NMD3-201ENST00000351193 ESPNB1AK53 854 aa10.34□□□□□ -0.75
NMD3-201ENST00000351193 AAMPQ13685 434 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 GLIPR1L2Q4G1C9 344 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
NMD3-201ENST00000351193 KANK1Q14678 1352 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 TRPM2O94759 1503 aa10.33□□□□□ -0.76
NMD3-201ENST00000351193 DDX19BQ9UMR2 479 aa10.32□□□□□ -0.76
NMD3-201ENST00000351193 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
NMD3-201ENST00000351193 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
NMD3-201ENST00000351193 PHF23Q9BUL5 403 aaPredicted RBP10.32□□□□□ -0.76
NMD3-201ENST00000351193 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
NMD3-201ENST00000351193 CD2BP2O95400 341 aaKnown RBP10.31□□□□□ -0.76
NMD3-201ENST00000351193 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
NMD3-201ENST00000351193 PTPRTO14522 1441 aa10.31□□□□□ -0.76
NMD3-201ENST00000351193 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
NMD3-201ENST00000351193 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
NMD3-201ENST00000351193 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
NMD3-201ENST00000351193 PLCH2O75038 1416 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 NCLP19338 710 aaKnown RBP10.3□□□□□ -0.76
NMD3-201ENST00000351193 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 GBP4Q96PP9 640 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
NMD3-201ENST00000351193 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 NOS1P29475 1434 aa10.3□□□□□ -0.76
NMD3-201ENST00000351193 SSFA2P28290 1259 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
NMD3-201ENST00000351193 RIPK4P57078 832 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 HDAC1Q13547 482 aaPredicted RBP10.29□□□□□ -0.76
NMD3-201ENST00000351193 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 CCDC27Q2M243 656 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 SMC5Q8IY18 1101 aa10.29□□□□□ -0.76
NMD3-201ENST00000351193 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
NMD3-201ENST00000351193 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 STK26Q9P289 416 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 CHD1LQ86WJ1 897 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 ZBTB40Q9NUA8 1239 aa10.28□□□□□ -0.76
NMD3-201ENST00000351193 GGT6Q6P531 493 aa10.27□□□□□ -0.77
NMD3-201ENST00000351193 NUCB1Q02818 461 aa10.27□□□□□ -0.77
NMD3-201ENST00000351193 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
NMD3-201ENST00000351193 MAP3K4Q9Y6R4 1608 aa10.27□□□□□ -0.77
NMD3-201ENST00000351193 ZMYM3Q14202 1370 aa10.26□□□□□ -0.77
NMD3-201ENST00000351193 FBLN1P23142 703 aa10.26□□□□□ -0.77
NMD3-201ENST00000351193 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
NMD3-201ENST00000351193 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
NMD3-201ENST00000351193 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
NMD3-201ENST00000351193 GAS2L2Q8NHY3 880 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms