RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 TPRNQ4KMQ1 711 aa24.24■■□□□ 1.47
RNF38-202ENST00000350199 SLKQ9H2G2 1235 aaPredicted RBP24.24■■□□□ 1.47
RNF38-202ENST00000350199 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
RNF38-202ENST00000350199 ATF3P18847 181 aa24.23■■□□□ 1.47
RNF38-202ENST00000350199 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
RNF38-202ENST00000350199 KIAA1211Q6ZU35 1233 aa24.22■■□□□ 1.47
RNF38-202ENST00000350199 ADGRL2O95490 1459 aa24.21■■□□□ 1.47
RNF38-202ENST00000350199 TSPYL4Q9UJ04 414 aa24.21■■□□□ 1.47
RNF38-202ENST00000350199 EIF2S2P20042 333 aaKnown RBP24.21■■□□□ 1.47
RNF38-202ENST00000350199 TRIM6-TRIM34B2RNG4 842 aa24.2■■□□□ 1.47
RNF38-202ENST00000350199 NECTIN2Q92692 538 aa24.2■■□□□ 1.47
RNF38-202ENST00000350199 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
RNF38-202ENST00000350199 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
RNF38-202ENST00000350199 EXOSC9Q06265 439 aaKnown RBP24.2■■□□□ 1.46
RNF38-202ENST00000350199 CCDC61Q9Y6R9 512 aa24.19■■□□□ 1.46
RNF38-202ENST00000350199 NUDT16Q96DE0 195 aaKnown RBP24.19■■□□□ 1.46
RNF38-202ENST00000350199 CCDC9Q9Y3X0 531 aaKnown RBP24.19■■□□□ 1.46
RNF38-202ENST00000350199 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
RNF38-202ENST00000350199 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
RNF38-202ENST00000350199 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
RNF38-202ENST00000350199 CHMP3Q9Y3E7 222 aa24.17■■□□□ 1.46
RNF38-202ENST00000350199 BCAR3O75815 825 aa24.17■■□□□ 1.46
RNF38-202ENST00000350199 ANKLE2Q86XL3 938 aa24.17■■□□□ 1.46
RNF38-202ENST00000350199 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
RNF38-202ENST00000350199 WDR63Q8IWG1 891 aa24.16■■□□□ 1.46
RNF38-202ENST00000350199 AAMPQ13685 434 aa24.15■■□□□ 1.46
RNF38-202ENST00000350199 TRIM44Q96DX7 344 aaPredicted RBP24.15■■□□□ 1.46
RNF38-202ENST00000350199 NAP1L2Q9ULW6 460 aaPredicted RBP24.14■■□□□ 1.46
RNF38-202ENST00000350199 FKBP5Q13451 457 aaPredicted RBP24.14■■□□□ 1.45
RNF38-202ENST00000350199 GPATCH3Q96I76 525 aa24.14■■□□□ 1.45
RNF38-202ENST00000350199 EVA1CP58658 441 aa24.14■■□□□ 1.45
RNF38-202ENST00000350199 SULT6B1Q6IMI4 303 aa24.14■■□□□ 1.45
RNF38-202ENST00000350199 RRS1Q15050 365 aaKnown RBP24.13■■□□□ 1.45
RNF38-202ENST00000350199 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
RNF38-202ENST00000350199 PDE3AQ14432 1141 aa24.11■■□□□ 1.45
RNF38-202ENST00000350199 TTC5Q8N0Z6 440 aa24.11■■□□□ 1.45
RNF38-202ENST00000350199 GAS2L2Q8NHY3 880 aa24.1■■□□□ 1.45
RNF38-202ENST00000350199 WWC1Q8IX03 1113 aa24.1■■□□□ 1.45
RNF38-202ENST00000350199 RAPGEF4Q8WZA2 1011 aa24.1■■□□□ 1.45
RNF38-202ENST00000350199 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
RNF38-202ENST00000350199 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
RNF38-202ENST00000350199 SLFN5Q08AF3 891 aa24.09■■□□□ 1.45
RNF38-202ENST00000350199 NLRP2Q9NX02 1062 aa24.08■■□□□ 1.45
RNF38-202ENST00000350199 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
RNF38-202ENST00000350199 FCHSD2O94868 740 aa24.07■■□□□ 1.44
RNF38-202ENST00000350199 TWISTNBQ3B726 338 aaPredicted RBP24.07■■□□□ 1.44
RNF38-202ENST00000350199 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
RNF38-202ENST00000350199 TAF7LQ5H9L4 462 aa24.06■■□□□ 1.44
RNF38-202ENST00000350199 ABCA8O94911 1581 aa24.05■■□□□ 1.44
RNF38-202ENST00000350199 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
RNF38-202ENST00000350199 SLC4A3P48751 1232 aa24.05■■□□□ 1.44
RNF38-202ENST00000350199 GORABQ5T7V8 394 aa24.05■■□□□ 1.44
RNF38-202ENST00000350199 TESK2Q96S53 571 aa24.05■■□□□ 1.44
RNF38-202ENST00000350199 C9orf78Q9NZ63 289 aaPredicted RBP24.04■■□□□ 1.44
RNF38-202ENST00000350199 LNPKQ9C0E8 428 aa24.04■■□□□ 1.44
RNF38-202ENST00000350199 TMPOP42166 694 aaKnown RBP24.04■■□□□ 1.44
RNF38-202ENST00000350199 NEXNQ0ZGT2 675 aa24.04■■□□□ 1.44
RNF38-202ENST00000350199 DEKP35659 375 aaKnown RBP24.03■■□□□ 1.44
RNF38-202ENST00000350199 CT47B1P0C2W7 299 aaPredicted RBP24.03■■□□□ 1.44
RNF38-202ENST00000350199 GBP4Q96PP9 640 aa24.03■■□□□ 1.44
RNF38-202ENST00000350199 NOB1Q9ULX3 412 aaKnown RBP24.03■■□□□ 1.44
RNF38-202ENST00000350199 NME9Q86XW9 330 aa24.02■■□□□ 1.44
RNF38-202ENST00000350199 RILPL2Q969X0 211 aa24.02■■□□□ 1.44
RNF38-202ENST00000350199 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
RNF38-202ENST00000350199 ZRSR1Q15695 479 aaKnown RBP24.02■■□□□ 1.44
RNF38-202ENST00000350199 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
RNF38-202ENST00000350199 AMOTL2Q9Y2J4 779 aa24■■□□□ 1.43
RNF38-202ENST00000350199 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
RNF38-202ENST00000350199 DDX58O95786 925 aaKnown RBP23.99■■□□□ 1.43
RNF38-202ENST00000350199 AMER1Q5JTC6 1135 aaPredicted RBP23.98■■□□□ 1.43
RNF38-202ENST00000350199 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
RNF38-202ENST00000350199 FOXD4L1Q9NU39 408 aa23.98■■□□□ 1.43
RNF38-202ENST00000350199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
RNF38-202ENST00000350199 TNRQ92752 1358 aa23.98■■□□□ 1.43
RNF38-202ENST00000350199 NFE2L2Q16236 605 aa23.98■■□□□ 1.43
RNF38-202ENST00000350199 PTMAP06454 111 aaKnown RBP23.98■■□□□ 1.43
RNF38-202ENST00000350199 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
RNF38-202ENST00000350199 PLEKHO1Q53GL0 409 aaPredicted RBP23.97■■□□□ 1.43
RNF38-202ENST00000350199 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
RNF38-202ENST00000350199 NSD2O96028 1365 aa23.97■■□□□ 1.43
RNF38-202ENST00000350199 GOLGA6L4A6NEF3 574 aa23.96■■□□□ 1.43
RNF38-202ENST00000350199 CCDC30Q5VVM6 783 aa23.96■■□□□ 1.43
RNF38-202ENST00000350199 MBD5Q9P267 1494 aa23.95■■□□□ 1.43
RNF38-202ENST00000350199 ST18O60284 1047 aa23.95■■□□□ 1.42
RNF38-202ENST00000350199 ATF7IPQ6VMQ6 1270 aa23.95■■□□□ 1.42
RNF38-202ENST00000350199 EMILIN1Q9Y6C2 1016 aa23.95■■□□□ 1.42
RNF38-202ENST00000350199 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.42
RNF38-202ENST00000350199 NOL8Q76FK4 1167 aaKnown RBP23.94■■□□□ 1.42
RNF38-202ENST00000350199 ADGBQ8N7X0 1667 aa23.94■■□□□ 1.42
RNF38-202ENST00000350199 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
RNF38-202ENST00000350199 PDZRN3Q9UPQ7 1066 aa23.92■■□□□ 1.42
RNF38-202ENST00000350199 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
RNF38-202ENST00000350199 MVPQ14764 893 aaKnown RBP23.92■■□□□ 1.42
RNF38-202ENST00000350199 GZF1Q9H116 711 aaPredicted RBP23.92■■□□□ 1.42
RNF38-202ENST00000350199 UHRF1BP1LA0JNW5 1464 aa23.91■■□□□ 1.42
RNF38-202ENST00000350199 XPCQ01831 940 aaPredicted RBP23.91■■□□□ 1.42
RNF38-202ENST00000350199 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
RNF38-202ENST00000350199 THUMPD2Q9BTF0 503 aaKnown RBP23.91■■□□□ 1.42
RNF38-202ENST00000350199 C1orf115Q9H7X2 142 aa23.91■■□□□ 1.42
RNF38-202ENST00000350199 PLCB2Q00722 1185 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms