RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
CSNK2A1-202ENST00000349736 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
CSNK2A1-202ENST00000349736 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.48
CSNK2A1-202ENST00000349736 SULT6B1Q6IMI4 303 aa12.02□□□□□ -0.49
CSNK2A1-202ENST00000349736 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
CSNK2A1-202ENST00000349736 FANCIQ9NVI1 1328 aa12.02□□□□□ -0.49
CSNK2A1-202ENST00000349736 NOB1Q9ULX3 412 aaKnown RBP12.02□□□□□ -0.49
CSNK2A1-202ENST00000349736 WDR7Q9Y4E6 1490 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 IGHDP01880 384 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 NLRP6P59044 892 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
CSNK2A1-202ENST00000349736 NOL8Q76FK4 1167 aaKnown RBP12□□□□□ -0.49
CSNK2A1-202ENST00000349736 ABCC2Q92887 1545 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 ADGRL2O95490 1459 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 ABCA8O94911 1581 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 FAM161AQ3B820 660 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 NGEFQ8N5V2 710 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
CSNK2A1-202ENST00000349736 SAMD9LQ8IVG5 1584 aa12□□□□□ -0.49
CSNK2A1-202ENST00000349736 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
CSNK2A1-202ENST00000349736 FYB1O15117 783 aa11.99□□□□□ -0.49
CSNK2A1-202ENST00000349736 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
CSNK2A1-202ENST00000349736 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
CSNK2A1-202ENST00000349736 MCM10Q7L590 875 aa11.99□□□□□ -0.49
CSNK2A1-202ENST00000349736 BACH2Q9BYV9 841 aa11.99□□□□□ -0.49
CSNK2A1-202ENST00000349736 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 STAC3Q96MF2 364 aa11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 RLBP1P12271 317 aa11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 NCLP19338 710 aaKnown RBP11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 BECN1Q14457 450 aa11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 SSH1Q8WYL5 1049 aa11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 PDZRN3Q9UPQ7 1066 aa11.98□□□□□ -0.49
CSNK2A1-202ENST00000349736 USHBP1Q8N6Y0 703 aa11.97□□□□□ -0.49
CSNK2A1-202ENST00000349736 PNNQ9H307 717 aaKnown RBP11.97□□□□□ -0.49
CSNK2A1-202ENST00000349736 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
CSNK2A1-202ENST00000349736 DUOX2Q9NRD8 1548 aa11.97□□□□□ -0.49
CSNK2A1-202ENST00000349736 GCC2Q8IWJ2 1684 aa11.97□□□□□ -0.49
CSNK2A1-202ENST00000349736 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.49
CSNK2A1-202ENST00000349736 RARSP54136 660 aaKnown RBP11.96□□□□□ -0.49
CSNK2A1-202ENST00000349736 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
CSNK2A1-202ENST00000349736 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
CSNK2A1-202ENST00000349736 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
CSNK2A1-202ENST00000349736 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
CSNK2A1-202ENST00000349736 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
CSNK2A1-202ENST00000349736 ABTB2Q8N961 1025 aa11.95□□□□□ -0.5
CSNK2A1-202ENST00000349736 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 PHACTR3Q96KR7 559 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 MAGI2Q86UL8 1455 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 SHANK2Q9UPX8 1470 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
CSNK2A1-202ENST00000349736 HSP90AB1P08238 724 aaKnown RBP11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 YEATS2Q9ULM3 1422 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 CHD1O14646 1710 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 BCORL1Q5H9F3 1711 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 PSME1Q06323 249 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
CSNK2A1-202ENST00000349736 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
CSNK2A1-202ENST00000349736 MS4A1P11836 297 aa11.91□□□□□ -0.5
CSNK2A1-202ENST00000349736 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
CSNK2A1-202ENST00000349736 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
CSNK2A1-202ENST00000349736 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
CSNK2A1-202ENST00000349736 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 RPGRIP1LQ68CZ1 1315 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 F6X3S4 739 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 TRIM27P14373 513 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 STK31Q9BXU1 1019 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
CSNK2A1-202ENST00000349736 ATP10AO60312 1499 aa11.9□□□□□ -0.51
CSNK2A1-202ENST00000349736 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 FOXO3O43524 673 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 FRAT2O75474 233 aaPredicted RBP11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 NPATQ14207 1427 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
CSNK2A1-202ENST00000349736 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 POLKQ9UBT6 870 aa11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 A0A1W2PP64 1363 aa11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 RILPL2Q969X0 211 aa11.88□□□□□ -0.51
CSNK2A1-202ENST00000349736 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
CSNK2A1-202ENST00000349736 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
CSNK2A1-202ENST00000349736 HSCBQ8IWL3 235 aa11.87□□□□□ -0.51
CSNK2A1-202ENST00000349736 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms