RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
CTNNB1-201ENST00000349496 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
CTNNB1-201ENST00000349496 TEX14Q8IWB6 1497 aa15.16■□□□□ 0.02
CTNNB1-201ENST00000349496 TSPYL1Q9H0U9 437 aa15.16■□□□□ 0.02
CTNNB1-201ENST00000349496 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
CTNNB1-201ENST00000349496 MPNDQ8N594 471 aa15.15■□□□□ 0.02
CTNNB1-201ENST00000349496 CALCOCO1Q9P1Z2 691 aa15.15■□□□□ 0.02
CTNNB1-201ENST00000349496 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
CTNNB1-201ENST00000349496 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
CTNNB1-201ENST00000349496 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
CTNNB1-201ENST00000349496 PLIN1O60240 522 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 TICAM2Q86XR7 235 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 GOLGA6L22H0YM25 854 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 GOLIM4O00461 696 aa15.13■□□□□ 0.01
CTNNB1-201ENST00000349496 ATP10BO94823 1461 aa15.12■□□□□ 0.01
CTNNB1-201ENST00000349496 MLECQ14165 292 aa15.12■□□□□ 0.01
CTNNB1-201ENST00000349496 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
CTNNB1-201ENST00000349496 PTPRGP23470 1445 aa15.11■□□□□ 0.01
CTNNB1-201ENST00000349496 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 SPATA31E1Q6ZUB1 1445 aa15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
CTNNB1-201ENST00000349496 PHF14O94880 888 aa15.09■□□□□ 0.01
CTNNB1-201ENST00000349496 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
CTNNB1-201ENST00000349496 GCC2Q8IWJ2 1684 aa15.09■□□□□ 0.01
CTNNB1-201ENST00000349496 KIAA2012Q0VF49 1180 aa15.09■□□□□ 0.01
CTNNB1-201ENST00000349496 AFAP1Q8N556 730 aa15.08■□□□□ 0.01
CTNNB1-201ENST00000349496 CHMP5Q9NZZ3 219 aa15.08■□□□□ 0.01
CTNNB1-201ENST00000349496 ROCK2O75116 1388 aaKnown RBP15.08■□□□□ 0
CTNNB1-201ENST00000349496 U2AF2P26368 475 aaKnown RBP eCLIP15.08■□□□□ 03e-9■□□□□ 10.3
CTNNB1-201ENST00000349496 SYNJ2O15056 1496 aa15.08■□□□□ 0
CTNNB1-201ENST00000349496 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
CTNNB1-201ENST00000349496 GOLGA6L6A8MZA4 724 aa15.08■□□□□ 0
CTNNB1-201ENST00000349496 HMGN5P82970 282 aaKnown RBP15.08■□□□□ 0
CTNNB1-201ENST00000349496 GBP4Q96PP9 640 aa15.08■□□□□ 0
CTNNB1-201ENST00000349496 MYCBPQ99417 103 aaPredicted RBP15.07■□□□□ 0
CTNNB1-201ENST00000349496 DNMT1P26358 1616 aaKnown RBP15.07■□□□□ 0
CTNNB1-201ENST00000349496 RSPH14Q9UHP6 348 aa15.07■□□□□ 0
CTNNB1-201ENST00000349496 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
CTNNB1-201ENST00000349496 PANK3Q9H999 370 aa15.06■□□□□ 0
CTNNB1-201ENST00000349496 CRBNQ96SW2 442 aa15.06■□□□□ 0
CTNNB1-201ENST00000349496 CLSTN1O94985 981 aa15.05■□□□□ 0
CTNNB1-201ENST00000349496 GEMIN8Q9NWZ8 242 aaKnown RBP15.05■□□□□ 0
CTNNB1-201ENST00000349496 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ 0
CTNNB1-201ENST00000349496 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ -0
CTNNB1-201ENST00000349496 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
CTNNB1-201ENST00000349496 TDO2P48775 406 aa15.04■□□□□ -0
CTNNB1-201ENST00000349496 PSEN1P49768 467 aa15.04■□□□□ -0
CTNNB1-201ENST00000349496 BCORL1Q5H9F3 1711 aa15.04■□□□□ -0
CTNNB1-201ENST00000349496 DDX49Q9Y6V7 483 aaKnown RBP15.04■□□□□ -0
CTNNB1-201ENST00000349496 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
CTNNB1-201ENST00000349496 MMP14P50281 582 aa15.03■□□□□ -0
CTNNB1-201ENST00000349496 MCCP23508 829 aa15.03■□□□□ -0
CTNNB1-201ENST00000349496 KTN1Q86UP2 1357 aaKnown RBP15.02■□□□□ -0
CTNNB1-201ENST00000349496 SRPK2P78362 688 aaKnown RBP15.02□□□□□ -0.01
CTNNB1-201ENST00000349496 PSMD1Q99460 953 aa15.01□□□□□ -0.01
CTNNB1-201ENST00000349496 SKOR2Q2VWA4 1001 aaPredicted RBP15.01□□□□□ -0.01
CTNNB1-201ENST00000349496 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
CTNNB1-201ENST00000349496 GAS2L3Q86XJ1 694 aa15.01□□□□□ -0.01
CTNNB1-201ENST00000349496 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
CTNNB1-201ENST00000349496 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
CTNNB1-201ENST00000349496 GRIPAP1Q4V328 841 aa15□□□□□ -0.01
CTNNB1-201ENST00000349496 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
CTNNB1-201ENST00000349496 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
CTNNB1-201ENST00000349496 GOLGA6L1Q8N7Z2 621 aa15□□□□□ -0.01
CTNNB1-201ENST00000349496 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
CTNNB1-201ENST00000349496 CENPQQ7L2Z9 268 aaPredicted RBP14.99□□□□□ -0.01
CTNNB1-201ENST00000349496 SLC20A2Q08357 652 aa14.99□□□□□ -0.01
CTNNB1-201ENST00000349496 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 C8orf34Q49A92 452 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 CCDC39Q9UFE4 941 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 MYRIPQ8NFW9 859 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 ZKSCAN5Q9Y2L8 839 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
CTNNB1-201ENST00000349496 EFCC1Q9HA90 598 aa14.97□□□□□ -0.01
CTNNB1-201ENST00000349496 NOL7Q9UMY1 257 aaKnown RBP14.97□□□□□ -0.01
CTNNB1-201ENST00000349496 YY1AP1Q9H869 796 aa14.97□□□□□ -0.01
CTNNB1-201ENST00000349496 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
CTNNB1-201ENST00000349496 CEP83Q9Y592 693 aa14.97□□□□□ -0.01
CTNNB1-201ENST00000349496 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.01
CTNNB1-201ENST00000349496 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
CTNNB1-201ENST00000349496 NUP160Q12769 1436 aa14.96□□□□□ -0.01
CTNNB1-201ENST00000349496 DEF6Q9H4E7 631 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 ARID4AP29374 1257 aaPredicted RBP14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 GABPB1Q06547 395 aaPredicted RBP14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 C10orf67Q8IYJ2 551 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 RASSF4Q9H2L5 321 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 ZNF500O60304 480 aaPredicted RBP14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 CARD10Q9BWT7 1032 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 STK26Q9P289 416 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 CCDC144AA2RUR9 1427 aa14.95□□□□□ -0.02
CTNNB1-201ENST00000349496 DRC1Q96MC2 740 aa14.94□□□□□ -0.02
CTNNB1-201ENST00000349496 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
CTNNB1-201ENST00000349496 SSR1P43307 286 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms