RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
MRPL55-204ENST00000348259 NAIPQ13075 1403 aa14.66□□□□□ -0.06
MRPL55-204ENST00000348259 ZNF326Q5BKZ1 582 aaKnown RBP14.65□□□□□ -0.06
MRPL55-204ENST00000348259 NGLY1Q96IV0 654 aa14.65□□□□□ -0.06
MRPL55-204ENST00000348259 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
MRPL55-204ENST00000348259 TRPC5Q9UL62 973 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-204ENST00000348259 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
MRPL55-204ENST00000348259 IFT172Q9UG01 1749 aa14.63□□□□□ -0.07
MRPL55-204ENST00000348259 USP21Q9UK80 565 aa14.63□□□□□ -0.07
MRPL55-204ENST00000348259 TECPR2O15040 1411 aa14.63□□□□□ -0.07
MRPL55-204ENST00000348259 GLI3P10071 1580 aa14.63□□□□□ -0.07
MRPL55-204ENST00000348259 RRBP1Q9P2E9 1410 aaKnown RBP14.62□□□□□ -0.07
MRPL55-204ENST00000348259 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
MRPL55-204ENST00000348259 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
MRPL55-204ENST00000348259 SLIT2O94813 1529 aa14.61□□□□□ -0.07
MRPL55-204ENST00000348259 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
MRPL55-204ENST00000348259 RPGRIP1LQ68CZ1 1315 aa14.6□□□□□ -0.07
MRPL55-204ENST00000348259 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
MRPL55-204ENST00000348259 ITGAEP38570 1179 aa14.58□□□□□ -0.08
MRPL55-204ENST00000348259 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.08
MRPL55-204ENST00000348259 USP32Q8NFA0 1604 aa14.57□□□□□ -0.08
MRPL55-204ENST00000348259 KIF1AQ12756 1690 aa14.57□□□□□ -0.08
MRPL55-204ENST00000348259 ABCA3Q99758 1704 aa14.57□□□□□ -0.08
MRPL55-204ENST00000348259 SPATA31E1Q6ZUB1 1445 aa14.56□□□□□ -0.08
MRPL55-204ENST00000348259 RALGAPBQ86X10 1494 aa14.56□□□□□ -0.08
MRPL55-204ENST00000348259 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
MRPL55-204ENST00000348259 LRP5O75197 1615 aa14.55□□□□□ -0.08
MRPL55-204ENST00000348259 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
MRPL55-204ENST00000348259 RGPD8O14715 1765 aaPredicted RBP14.55□□□□□ -0.08
MRPL55-204ENST00000348259 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
MRPL55-204ENST00000348259 PLCH1Q4KWH8 1693 aa14.54□□□□□ -0.08
MRPL55-204ENST00000348259 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
MRPL55-204ENST00000348259 ABCC11Q96J66 1382 aa14.53□□□□□ -0.08
MRPL55-204ENST00000348259 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.08
MRPL55-204ENST00000348259 PLEKHH1Q9ULM0 1364 aa14.52□□□□□ -0.08
MRPL55-204ENST00000348259 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
MRPL55-204ENST00000348259 PIK3C2GO75747 1445 aa14.51□□□□□ -0.09
MRPL55-204ENST00000348259 SPATA31A3Q5VYP0 1347 aa14.51□□□□□ -0.09
MRPL55-204ENST00000348259 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
MRPL55-204ENST00000348259 FOXO3O43524 673 aa14.51□□□□□ -0.09
MRPL55-204ENST00000348259 ESCO1Q5FWF5 840 aa14.51□□□□□ -0.09
MRPL55-204ENST00000348259 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
MRPL55-204ENST00000348259 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
MRPL55-204ENST00000348259 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-204ENST00000348259 UNC5CLQ8IV45 518 aa14.49□□□□□ -0.09
MRPL55-204ENST00000348259 WAPLQ7Z5K2 1190 aa14.48□□□□□ -0.09
MRPL55-204ENST00000348259 NRXN1Q9ULB1 1477 aa14.48□□□□□ -0.09
MRPL55-204ENST00000348259 TRPM3Q9HCF6 1732 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-204ENST00000348259 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-204ENST00000348259 TNS3Q68CZ2 1445 aa14.47□□□□□ -0.09
MRPL55-204ENST00000348259 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
MRPL55-204ENST00000348259 FOXD1Q16676 465 aa14.46□□□□□ -0.09
MRPL55-204ENST00000348259 YTHDC2Q9H6S0 1430 aaKnown RBP14.46□□□□□ -0.09
MRPL55-204ENST00000348259 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.1
MRPL55-204ENST00000348259 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
MRPL55-204ENST00000348259 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
MRPL55-204ENST00000348259 ALS2Q96Q42 1657 aa14.45□□□□□ -0.1
MRPL55-204ENST00000348259 ADGRB2O60241 1585 aa14.44□□□□□ -0.1
MRPL55-204ENST00000348259 VPS72Q15906 364 aa14.44□□□□□ -0.1
MRPL55-204ENST00000348259 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
MRPL55-204ENST00000348259 SBNO1A3KN83 1393 aa14.44□□□□□ -0.1
MRPL55-204ENST00000348259 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
MRPL55-204ENST00000348259 TMEM132EQ6IEE7 984 aa14.42□□□□□ -0.1
MRPL55-204ENST00000348259 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
MRPL55-204ENST00000348259 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
MRPL55-204ENST00000348259 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
MRPL55-204ENST00000348259 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
MRPL55-204ENST00000348259 STK26Q9P289 416 aa14.41□□□□□ -0.1
MRPL55-204ENST00000348259 THSD7AQ9UPZ6 1657 aa14.4□□□□□ -0.1
MRPL55-204ENST00000348259 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
MRPL55-204ENST00000348259 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
MRPL55-204ENST00000348259 ADGRB1O14514 1584 aa14.39□□□□□ -0.11
MRPL55-204ENST00000348259 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
MRPL55-204ENST00000348259 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
MRPL55-204ENST00000348259 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
MRPL55-204ENST00000348259 ANKARQ7Z5J8 1434 aa14.38□□□□□ -0.11
MRPL55-204ENST00000348259 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
MRPL55-204ENST00000348259 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
MRPL55-204ENST00000348259 RGL3Q3MIN7 710 aa14.36□□□□□ -0.11
MRPL55-204ENST00000348259 KRT27Q7Z3Y8 459 aa14.36□□□□□ -0.11
MRPL55-204ENST00000348259 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
MRPL55-204ENST00000348259 HRCP23327 699 aa14.35□□□□□ -0.11
MRPL55-204ENST00000348259 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
MRPL55-204ENST00000348259 PSME1Q06323 249 aa14.33□□□□□ -0.12
MRPL55-204ENST00000348259 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
MRPL55-204ENST00000348259 DHX57Q6P158 1386 aaKnown RBP14.32□□□□□ -0.12
MRPL55-204ENST00000348259 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
MRPL55-204ENST00000348259 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
MRPL55-204ENST00000348259 RREB1Q92766 1687 aa14.31□□□□□ -0.12
MRPL55-204ENST00000348259 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
MRPL55-204ENST00000348259 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
MRPL55-204ENST00000348259 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
MRPL55-204ENST00000348259 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
MRPL55-204ENST00000348259 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
MRPL55-204ENST00000348259 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-204ENST00000348259 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
MRPL55-204ENST00000348259 BAG6P46379 1132 aa14.28□□□□□ -0.12
MRPL55-204ENST00000348259 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
MRPL55-204ENST00000348259 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
MRPL55-204ENST00000348259 ARHGEF28Q8N1W1 1705 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms