RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 PRDM15P57071 1507 aaPredicted RBP13.73□□□□□ -0.21
STAU1-202ENST00000347458 IBTKQ9P2D0 1353 aaPredicted RBP13.73□□□□□ -0.21
STAU1-202ENST00000347458 PDLIM2Q96JY6 352 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 RBSNQ9H1K0 784 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 WDR7Q9Y4E6 1490 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
STAU1-202ENST00000347458 ZKSCAN5Q9Y2L8 839 aa13.73□□□□□ -0.21
STAU1-202ENST00000347458 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
STAU1-202ENST00000347458 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.216e-7■■■□□ 18.2
STAU1-202ENST00000347458 STAC3Q96MF2 364 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 IFT140Q96RY7 1462 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
STAU1-202ENST00000347458 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
STAU1-202ENST00000347458 PIK3C2GO75747 1445 aa13.71□□□□□ -0.21
STAU1-202ENST00000347458 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.21
STAU1-202ENST00000347458 ZNF445P59923 1031 aa13.71□□□□□ -0.21
STAU1-202ENST00000347458 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
STAU1-202ENST00000347458 PBRM1Q86U86 1689 aa13.71□□□□□ -0.22
STAU1-202ENST00000347458 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
STAU1-202ENST00000347458 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
STAU1-202ENST00000347458 TSC1Q92574 1164 aa13.7□□□□□ -0.22
STAU1-202ENST00000347458 CROCC2H7BZ55 1655 aa13.7□□□□□ -0.22
STAU1-202ENST00000347458 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
STAU1-202ENST00000347458 BAG4O95429 457 aaKnown RBP13.69□□□□□ -0.22
STAU1-202ENST00000347458 CBX1P83916 185 aa13.69□□□□□ -0.22
STAU1-202ENST00000347458 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
STAU1-202ENST00000347458 KIF2CQ99661 725 aa13.69□□□□□ -0.22
STAU1-202ENST00000347458 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
STAU1-202ENST00000347458 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
STAU1-202ENST00000347458 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
STAU1-202ENST00000347458 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
STAU1-202ENST00000347458 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
STAU1-202ENST00000347458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.227e-7■□□□□ 10.2
STAU1-202ENST00000347458 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 ZNF710Q8N1W2 664 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
STAU1-202ENST00000347458 A2MP01023 1474 aa13.67□□□□□ -0.22
STAU1-202ENST00000347458 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
STAU1-202ENST00000347458 LAMC1P11047 1609 aa13.66□□□□□ -0.22
STAU1-202ENST00000347458 TNNT2P45379 298 aaPredicted RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
STAU1-202ENST00000347458 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 ABCC10Q5T3U5 1492 aa13.66□□□□□ -0.22
STAU1-202ENST00000347458 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 MCM5P33992 734 aa13.66□□□□□ -0.22
STAU1-202ENST00000347458 NAP1L2Q9ULW6 460 aaPredicted RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
STAU1-202ENST00000347458 AK9Q5TCS8 1911 aa13.65□□□□□ -0.22
STAU1-202ENST00000347458 GPATCH8Q9UKJ3 1502 aaKnown RBP13.65□□□□□ -0.22
STAU1-202ENST00000347458 KIF20AO95235 890 aa13.65□□□□□ -0.22
STAU1-202ENST00000347458 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
STAU1-202ENST00000347458 ASXL1Q8IXJ9 1541 aa13.65□□□□□ -0.22
STAU1-202ENST00000347458 ITSN2Q9NZM3 1697 aa13.65□□□□□ -0.22
STAU1-202ENST00000347458 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
STAU1-202ENST00000347458 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
STAU1-202ENST00000347458 PTPRGP23470 1445 aa13.64□□□□□ -0.23
STAU1-202ENST00000347458 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
STAU1-202ENST00000347458 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
STAU1-202ENST00000347458 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
STAU1-202ENST00000347458 NGEFQ8N5V2 710 aa13.63□□□□□ -0.23
STAU1-202ENST00000347458 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
STAU1-202ENST00000347458 ADCY10Q96PN6 1610 aa13.62□□□□□ -0.23
STAU1-202ENST00000347458 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
STAU1-202ENST00000347458 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
STAU1-202ENST00000347458 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
STAU1-202ENST00000347458 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
STAU1-202ENST00000347458 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
STAU1-202ENST00000347458 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
STAU1-202ENST00000347458 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
STAU1-202ENST00000347458 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
STAU1-202ENST00000347458 GPT2Q8TD30 523 aa13.6□□□□□ -0.23
STAU1-202ENST00000347458 DNTTIP2Q5QJE6 756 aaKnown RBP13.6□□□□□ -0.23
STAU1-202ENST00000347458 IGSF3O75054 1194 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 PKP1Q13835 747 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
STAU1-202ENST00000347458 PLA2R1Q13018 1463 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
STAU1-202ENST00000347458 KIAA2012Q0VF49 1180 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
STAU1-202ENST00000347458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.239e-7■■■■□ 22
STAU1-202ENST00000347458 SYNMO15061 1565 aa13.58□□□□□ -0.23
STAU1-202ENST00000347458 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
STAU1-202ENST00000347458 SYCE3A1L190 88 aa13.58□□□□□ -0.24
STAU1-202ENST00000347458 VGLL3A8MV65 326 aa13.58□□□□□ -0.24
STAU1-202ENST00000347458 ZKSCAN2Q63HK3 967 aa13.58□□□□□ -0.24
STAU1-202ENST00000347458 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
STAU1-202ENST00000347458 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
STAU1-202ENST00000347458 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
STAU1-202ENST00000347458 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
STAU1-202ENST00000347458 LRSAM1Q6UWE0 723 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms