RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 RUNDC1Q96C34 613 aa23.22■■□□□ 1.31
KRCC1-201ENST00000347055 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
KRCC1-201ENST00000347055 RWDD1Q9H446 243 aaPredicted RBP23.22■■□□□ 1.31
KRCC1-201ENST00000347055 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
KRCC1-201ENST00000347055 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
KRCC1-201ENST00000347055 CHD1O14646 1710 aa23.21■■□□□ 1.31
KRCC1-201ENST00000347055 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
KRCC1-201ENST00000347055 SPAG9O60271 1321 aaKnown RBP23.19■■□□□ 1.3
KRCC1-201ENST00000347055 POGKQ9P215 609 aa23.19■■□□□ 1.3
KRCC1-201ENST00000347055 SEC24BO95487 1268 aa23.18■■□□□ 1.3
KRCC1-201ENST00000347055 PANK1Q8TE04 598 aa23.17■■□□□ 1.3
KRCC1-201ENST00000347055 CARD14Q9BXL6 1004 aa23.17■■□□□ 1.3
KRCC1-201ENST00000347055 ISY1Q9ULR0 285 aaKnown RBP23.17■■□□□ 1.3
KRCC1-201ENST00000347055 ADGRB2O60241 1585 aa23.17■■□□□ 1.3
KRCC1-201ENST00000347055 DMRT2Q9Y5R5 561 aa23.17■■□□□ 1.3
KRCC1-201ENST00000347055 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
KRCC1-201ENST00000347055 EFCAB6Q5THR3 1501 aa23.15■■□□□ 1.3
KRCC1-201ENST00000347055 LMTK2Q8IWU2 1503 aa23.15■■□□□ 1.3
KRCC1-201ENST00000347055 FANCAO15360 1455 aa23.15■■□□□ 1.3
KRCC1-201ENST00000347055 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
KRCC1-201ENST00000347055 FSD2A1L4K1 749 aa23.14■■□□□ 1.3
KRCC1-201ENST00000347055 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.3
KRCC1-201ENST00000347055 NSD2O96028 1365 aa23.14■■□□□ 1.29
KRCC1-201ENST00000347055 MYH16Q9H6N6 1097 aa23.14■■□□□ 1.29
KRCC1-201ENST00000347055 MROH1Q8NDA8 1641 aa23.14■■□□□ 1.29
KRCC1-201ENST00000347055 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
KRCC1-201ENST00000347055 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
KRCC1-201ENST00000347055 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
KRCC1-201ENST00000347055 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
KRCC1-201ENST00000347055 CHMP5Q9NZZ3 219 aa23.11■■□□□ 1.29
KRCC1-201ENST00000347055 PCDHB15Q9Y5E8 787 aa23.11■■□□□ 1.29
KRCC1-201ENST00000347055 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
KRCC1-201ENST00000347055 QRICH2Q9H0J4 1663 aa23.1■■□□□ 1.29
KRCC1-201ENST00000347055 GOLGA6L3A6NEY3 463 aa23.1■■□□□ 1.29
KRCC1-201ENST00000347055 SLKQ9H2G2 1235 aaPredicted RBP23.1■■□□□ 1.29
KRCC1-201ENST00000347055 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
KRCC1-201ENST00000347055 MCM4P33991 863 aa23.09■■□□□ 1.29
KRCC1-201ENST00000347055 MVPQ14764 893 aaKnown RBP23.09■■□□□ 1.29
KRCC1-201ENST00000347055 MROH2AA6NES4 1674 aa23.08■■□□□ 1.29
KRCC1-201ENST00000347055 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
KRCC1-201ENST00000347055 TCP11L2Q8N4U5 519 aa23.07■■□□□ 1.28
KRCC1-201ENST00000347055 HDAC1Q13547 482 aaPredicted RBP23.06■■□□□ 1.28
KRCC1-201ENST00000347055 CFAP70Q5T0N1 1121 aa23.06■■□□□ 1.28
KRCC1-201ENST00000347055 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
KRCC1-201ENST00000347055 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
KRCC1-201ENST00000347055 EIF5BO60841 1220 aaKnown RBP23.04■■□□□ 1.28
KRCC1-201ENST00000347055 ZKSCAN2Q63HK3 967 aa23.04■■□□□ 1.28
KRCC1-201ENST00000347055 PTMSP20962 102 aa23.04■■□□□ 1.28
KRCC1-201ENST00000347055 PPLO60437 1756 aa23.03■■□□□ 1.28
KRCC1-201ENST00000347055 RLBP1P12271 317 aa23.03■■□□□ 1.28
KRCC1-201ENST00000347055 CLCN1P35523 988 aa23.03■■□□□ 1.28
KRCC1-201ENST00000347055 MRE11P49959 708 aa23.03■■□□□ 1.28
KRCC1-201ENST00000347055 C22orf23Q9BZE7 217 aa23.02■■□□□ 1.28
KRCC1-201ENST00000347055 RRAGDQ9NQL2 400 aaPredicted RBP23.02■■□□□ 1.28
KRCC1-201ENST00000347055 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
KRCC1-201ENST00000347055 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
KRCC1-201ENST00000347055 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
KRCC1-201ENST00000347055 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
KRCC1-201ENST00000347055 XRCC6P12956 609 aaKnown RBP eCLIP23■■□□□ 1.27
KRCC1-201ENST00000347055 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
KRCC1-201ENST00000347055 ABCC11Q96J66 1382 aa23■■□□□ 1.27
KRCC1-201ENST00000347055 CIZ1Q9ULV3 898 aaPredicted RBP22.99■■□□□ 1.27
KRCC1-201ENST00000347055 IL16Q14005 1332 aa22.99■■□□□ 1.27
KRCC1-201ENST00000347055 DDX19BQ9UMR2 479 aa22.99■■□□□ 1.27
KRCC1-201ENST00000347055 UGGT1Q9NYU2 1555 aa22.98■■□□□ 1.27
KRCC1-201ENST00000347055 SNX21Q969T3 373 aa22.98■■□□□ 1.27
KRCC1-201ENST00000347055 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
KRCC1-201ENST00000347055 HSCBQ8IWL3 235 aa22.96■■□□□ 1.27
KRCC1-201ENST00000347055 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
KRCC1-201ENST00000347055 RPGRIP1LQ68CZ1 1315 aa22.96■■□□□ 1.27
KRCC1-201ENST00000347055 ANKRD36BQ8N2N9 1353 aa22.96■■□□□ 1.27
KRCC1-201ENST00000347055 TRAK2O60296 914 aa22.96■■□□□ 1.27
KRCC1-201ENST00000347055 SMC5Q8IY18 1101 aa22.96■■□□□ 1.27
KRCC1-201ENST00000347055 RBM25P49756 843 aaKnown RBP22.94■■□□□ 1.26
KRCC1-201ENST00000347055 NOS1P29475 1434 aa22.94■■□□□ 1.26
KRCC1-201ENST00000347055 DDIT3P35638 169 aa22.94■■□□□ 1.26
KRCC1-201ENST00000347055 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
KRCC1-201ENST00000347055 C14orf93Q9H972 538 aaKnown RBP22.94■■□□□ 1.26
KRCC1-201ENST00000347055 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
KRCC1-201ENST00000347055 MTHFSP49914 203 aa22.92■■□□□ 1.26
KRCC1-201ENST00000347055 KIF16BQ96L93 1317 aa22.92■■□□□ 1.26
KRCC1-201ENST00000347055 SKOR2Q2VWA4 1001 aaPredicted RBP22.91■■□□□ 1.26
KRCC1-201ENST00000347055 ZNF692Q9BU19 519 aaPredicted RBP22.91■■□□□ 1.26
KRCC1-201ENST00000347055 MED14O60244 1454 aa22.91■■□□□ 1.26
KRCC1-201ENST00000347055 ANKRD26Q9UPS8 1709 aa22.91■■□□□ 1.26
KRCC1-201ENST00000347055 KIF3BO15066 747 aa22.91■■□□□ 1.26
KRCC1-201ENST00000347055 RRP7AQ9Y3A4 280 aaKnown RBP22.91■■□□□ 1.26
KRCC1-201ENST00000347055 GLIPR1L2Q4G1C9 344 aa22.9■■□□□ 1.26
KRCC1-201ENST00000347055 ARHGEF28Q8N1W1 1705 aaKnown RBP22.89■■□□□ 1.26
KRCC1-201ENST00000347055 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
KRCC1-201ENST00000347055 NEUROD2Q15784 382 aa22.89■■□□□ 1.26
KRCC1-201ENST00000347055 TNNQ9UQP3 1299 aa22.89■■□□□ 1.25
KRCC1-201ENST00000347055 GLI2P10070 1586 aa22.88■■□□□ 1.25
KRCC1-201ENST00000347055 ATF7IPQ6VMQ6 1270 aa22.88■■□□□ 1.25
KRCC1-201ENST00000347055 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
KRCC1-201ENST00000347055 MFAP1P55081 439 aaKnown RBP22.87■■□□□ 1.25
KRCC1-201ENST00000347055 GBP4Q96PP9 640 aa22.87■■□□□ 1.25
KRCC1-201ENST00000347055 CHMP4BQ9H444 224 aaKnown RBP22.87■■□□□ 1.25
KRCC1-201ENST00000347055 KIDINS220Q9ULH0 1771 aa22.87■■□□□ 1.25
KRCC1-201ENST00000347055 IPO8O15397 1037 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms