RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.61
CDK5RAP1-202ENST00000346416 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.61
CDK5RAP1-202ENST00000346416 ANKRD36BQ8N2N9 1353 aa18.83■□□□□ 0.61
CDK5RAP1-202ENST00000346416 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP1-202ENST00000346416 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP1-202ENST00000346416 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
CDK5RAP1-202ENST00000346416 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
CDK5RAP1-202ENST00000346416 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
CDK5RAP1-202ENST00000346416 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
CDK5RAP1-202ENST00000346416 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
CDK5RAP1-202ENST00000346416 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
CDK5RAP1-202ENST00000346416 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP1-202ENST00000346416 DLC1Q96QB1 1528 aa18.79■□□□□ 0.6
CDK5RAP1-202ENST00000346416 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
CDK5RAP1-202ENST00000346416 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
CDK5RAP1-202ENST00000346416 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
CDK5RAP1-202ENST00000346416 ABCC11Q96J66 1382 aa18.78■□□□□ 0.6
CDK5RAP1-202ENST00000346416 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
CDK5RAP1-202ENST00000346416 CEBPAP49715 358 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP1-202ENST00000346416 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
CDK5RAP1-202ENST00000346416 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
CDK5RAP1-202ENST00000346416 A0A1W2PP64 1363 aa18.77■□□□□ 0.59
CDK5RAP1-202ENST00000346416 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP1-202ENST00000346416 CDK19Q9BWU1 502 aa18.76■□□□□ 0.59
CDK5RAP1-202ENST00000346416 METP08581 1390 aa18.76■□□□□ 0.59
CDK5RAP1-202ENST00000346416 POLR3AO14802 1390 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP1-202ENST00000346416 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
CDK5RAP1-202ENST00000346416 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
CDK5RAP1-202ENST00000346416 NSD2O96028 1365 aa18.74■□□□□ 0.59
CDK5RAP1-202ENST00000346416 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
CDK5RAP1-202ENST00000346416 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
CDK5RAP1-202ENST00000346416 CD163L1Q9NR16 1453 aa18.72■□□□□ 0.59
CDK5RAP1-202ENST00000346416 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
CDK5RAP1-202ENST00000346416 C3P01024 1663 aa18.71■□□□□ 0.59
CDK5RAP1-202ENST00000346416 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
CDK5RAP1-202ENST00000346416 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
CDK5RAP1-202ENST00000346416 TXNDC2Q86VQ3 553 aa18.7■□□□□ 0.58
CDK5RAP1-202ENST00000346416 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
CDK5RAP1-202ENST00000346416 MTHFSP49914 203 aa18.69■□□□□ 0.58
CDK5RAP1-202ENST00000346416 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
CDK5RAP1-202ENST00000346416 LTKP29376 864 aa18.68■□□□□ 0.58
CDK5RAP1-202ENST00000346416 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP1-202ENST00000346416 ZNF521Q96K83 1311 aa18.68■□□□□ 0.58
CDK5RAP1-202ENST00000346416 TECPR2O15040 1411 aa18.68■□□□□ 0.58
CDK5RAP1-202ENST00000346416 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 APAF1O14727 1248 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 SHPRHQ149N8 1683 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 FAM135BQ49AJ0 1406 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 ADAMTS13Q76LX8 1427 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 SIRT1Q96EB6 747 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
CDK5RAP1-202ENST00000346416 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
CDK5RAP1-202ENST00000346416 PLEKHG1Q9ULL1 1385 aa18.65■□□□□ 0.58
CDK5RAP1-202ENST00000346416 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP1-202ENST00000346416 FYB1O15117 783 aa18.65■□□□□ 0.58
CDK5RAP1-202ENST00000346416 RRP1P56182 461 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP1-202ENST00000346416 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
CDK5RAP1-202ENST00000346416 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
CDK5RAP1-202ENST00000346416 CPS1P31327 1500 aa18.64■□□□□ 0.57
CDK5RAP1-202ENST00000346416 GOLGA2Q08379 1002 aa18.64■□□□□ 0.57
CDK5RAP1-202ENST00000346416 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
CDK5RAP1-202ENST00000346416 MED14O60244 1454 aa18.62■□□□□ 0.57
CDK5RAP1-202ENST00000346416 ATP7BP35670 1465 aa18.62■□□□□ 0.57
CDK5RAP1-202ENST00000346416 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
CDK5RAP1-202ENST00000346416 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
CDK5RAP1-202ENST00000346416 SLIT1O75093 1534 aa18.61■□□□□ 0.57
CDK5RAP1-202ENST00000346416 ROBO2Q9HCK4 1378 aa18.61■□□□□ 0.57
CDK5RAP1-202ENST00000346416 NGEFQ8N5V2 710 aa18.61■□□□□ 0.57
CDK5RAP1-202ENST00000346416 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
CDK5RAP1-202ENST00000346416 SLC26A8Q96RN1 970 aa18.59■□□□□ 0.57
CDK5RAP1-202ENST00000346416 PPIP5K1Q6PFW1 1433 aa18.59■□□□□ 0.57
CDK5RAP1-202ENST00000346416 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
CDK5RAP1-202ENST00000346416 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP1-202ENST00000346416 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.57
CDK5RAP1-202ENST00000346416 RUNDC1Q96C34 613 aa18.58■□□□□ 0.57
CDK5RAP1-202ENST00000346416 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.57
CDK5RAP1-202ENST00000346416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■■■□□ 15.6
CDK5RAP1-202ENST00000346416 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
CDK5RAP1-202ENST00000346416 TRMT2AQ8IZ69 625 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP1-202ENST00000346416 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
CDK5RAP1-202ENST00000346416 SPINK5Q9NQ38 1064 aaPredicted RBP18.56■□□□□ 0.56
CDK5RAP1-202ENST00000346416 NCKAP5LQ9HCH0 1330 aa18.55■□□□□ 0.56
CDK5RAP1-202ENST00000346416 PTPRUQ92729 1446 aa18.55■□□□□ 0.56
CDK5RAP1-202ENST00000346416 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP1-202ENST00000346416 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
CDK5RAP1-202ENST00000346416 WWC1Q8IX03 1113 aa18.54■□□□□ 0.56
CDK5RAP1-202ENST00000346416 TCP11L2Q8N4U5 519 aa18.54■□□□□ 0.56
CDK5RAP1-202ENST00000346416 CCDC136Q96JN2 1154 aa18.54■□□□□ 0.56
CDK5RAP1-202ENST00000346416 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
CDK5RAP1-202ENST00000346416 EDC4Q6P2E9 1401 aaKnown RBP18.54■□□□□ 0.56
CDK5RAP1-202ENST00000346416 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 IQSEC2Q5JU85 1478 aa18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 E9PSI1 815 aa18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 PLIN1O60240 522 aa18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 CDC42BPGQ6DT37 1551 aa18.53■□□□□ 0.56
CDK5RAP1-202ENST00000346416 NEUROD2Q15784 382 aa18.52■□□□□ 0.56
CDK5RAP1-202ENST00000346416 EXOC6Q8TAG9 804 aa18.52■□□□□ 0.56
CDK5RAP1-202ENST00000346416 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms