RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 STK26Q9P289 416 aa16.41■□□□□ 0.22
UBE2A-201ENST00000346330 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
UBE2A-201ENST00000346330 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
UBE2A-201ENST00000346330 TMEM132EQ6IEE7 984 aa16.4■□□□□ 0.22
UBE2A-201ENST00000346330 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
UBE2A-201ENST00000346330 RXRBP28702 533 aa16.39■□□□□ 0.21
UBE2A-201ENST00000346330 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
UBE2A-201ENST00000346330 NUTM2FA1L443 756 aa16.38■□□□□ 0.21
UBE2A-201ENST00000346330 EP400Q96L91 3159 aa16.38■□□□□ 0.21
UBE2A-201ENST00000346330 IFT172Q9UG01 1749 aa16.37■□□□□ 0.21
UBE2A-201ENST00000346330 XPCQ01831 940 aaPredicted RBP16.37■□□□□ 0.21
UBE2A-201ENST00000346330 TECPR2O15040 1411 aa16.36■□□□□ 0.21
UBE2A-201ENST00000346330 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
UBE2A-201ENST00000346330 COL22A1Q8NFW1 1626 aaPredicted RBP16.36■□□□□ 0.21
UBE2A-201ENST00000346330 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
UBE2A-201ENST00000346330 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
UBE2A-201ENST00000346330 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
UBE2A-201ENST00000346330 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
UBE2A-201ENST00000346330 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
UBE2A-201ENST00000346330 FOXO3O43524 673 aa16.34■□□□□ 0.21
UBE2A-201ENST00000346330 PXDNQ92626 1479 aa16.34■□□□□ 0.21
UBE2A-201ENST00000346330 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
UBE2A-201ENST00000346330 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
UBE2A-201ENST00000346330 MYOM2P54296 1465 aa16.33■□□□□ 0.2
UBE2A-201ENST00000346330 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
UBE2A-201ENST00000346330 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
UBE2A-201ENST00000346330 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
UBE2A-201ENST00000346330 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
UBE2A-201ENST00000346330 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
UBE2A-201ENST00000346330 RBM6P78332 1123 aaKnown RBP16.29■□□□□ 0.2
UBE2A-201ENST00000346330 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
UBE2A-201ENST00000346330 FNBP4Q8N3X1 1017 aaPredicted RBP16.28■□□□□ 0.2
UBE2A-201ENST00000346330 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
UBE2A-201ENST00000346330 USP21Q9UK80 565 aa16.28■□□□□ 0.2
UBE2A-201ENST00000346330 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
UBE2A-201ENST00000346330 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
UBE2A-201ENST00000346330 ATRNO75882 1429 aa16.27■□□□□ 0.19
UBE2A-201ENST00000346330 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE2A-201ENST00000346330 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
UBE2A-201ENST00000346330 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
UBE2A-201ENST00000346330 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
UBE2A-201ENST00000346330 GLI3P10071 1580 aa16.22■□□□□ 0.19
UBE2A-201ENST00000346330 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
UBE2A-201ENST00000346330 TRPC5Q9UL62 973 aaPredicted RBP16.22■□□□□ 0.19
UBE2A-201ENST00000346330 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
UBE2A-201ENST00000346330 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
UBE2A-201ENST00000346330 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.19
UBE2A-201ENST00000346330 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
UBE2A-201ENST00000346330 CABLES1Q8TDN4 633 aa16.2■□□□□ 0.18
UBE2A-201ENST00000346330 DHX57Q6P158 1386 aaKnown RBP16.2■□□□□ 0.18
UBE2A-201ENST00000346330 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
UBE2A-201ENST00000346330 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
UBE2A-201ENST00000346330 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
UBE2A-201ENST00000346330 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
UBE2A-201ENST00000346330 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
UBE2A-201ENST00000346330 TRAK1Q9UPV9 953 aa16.18■□□□□ 0.18
UBE2A-201ENST00000346330 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
UBE2A-201ENST00000346330 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
UBE2A-201ENST00000346330 PMFBP1Q8TBY8 1022 aa16.17■□□□□ 0.18
UBE2A-201ENST00000346330 SLIT2O94813 1529 aa16.16■□□□□ 0.18
UBE2A-201ENST00000346330 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
UBE2A-201ENST00000346330 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
UBE2A-201ENST00000346330 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
UBE2A-201ENST00000346330 TNS3Q68CZ2 1445 aa16.16■□□□□ 0.18
UBE2A-201ENST00000346330 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
UBE2A-201ENST00000346330 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
UBE2A-201ENST00000346330 POGKQ9P215 609 aa16.15■□□□□ 0.18
UBE2A-201ENST00000346330 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
UBE2A-201ENST00000346330 DLC1Q96QB1 1528 aa16.14■□□□□ 0.18
UBE2A-201ENST00000346330 ATAD2Q6PL18 1390 aa16.14■□□□□ 0.17
UBE2A-201ENST00000346330 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
UBE2A-201ENST00000346330 MINK1Q8N4C8 1332 aaPredicted RBP16.14■□□□□ 0.17
UBE2A-201ENST00000346330 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
UBE2A-201ENST00000346330 ACIN1Q9UKV3 1341 aaKnown RBP16.13■□□□□ 0.17
UBE2A-201ENST00000346330 LMOD2Q6P5Q4 547 aa16.12■□□□□ 0.17
UBE2A-201ENST00000346330 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
UBE2A-201ENST00000346330 PSME1Q06323 249 aa16.11■□□□□ 0.17
UBE2A-201ENST00000346330 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
UBE2A-201ENST00000346330 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
UBE2A-201ENST00000346330 NRAPQ86VF7 1730 aa16.1■□□□□ 0.17
UBE2A-201ENST00000346330 ANKARQ7Z5J8 1434 aa16.1■□□□□ 0.17
UBE2A-201ENST00000346330 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
UBE2A-201ENST00000346330 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
UBE2A-201ENST00000346330 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.16
UBE2A-201ENST00000346330 WASLO00401 505 aaPredicted RBP16.07■□□□□ 0.16
UBE2A-201ENST00000346330 ALS2Q96Q42 1657 aa16.07■□□□□ 0.16
UBE2A-201ENST00000346330 ARHGEF10O15013 1369 aa16.06■□□□□ 0.16
UBE2A-201ENST00000346330 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
UBE2A-201ENST00000346330 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
UBE2A-201ENST00000346330 HRCP23327 699 aa16.05■□□□□ 0.16
UBE2A-201ENST00000346330 VPS72Q15906 364 aa16.05■□□□□ 0.16
UBE2A-201ENST00000346330 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
UBE2A-201ENST00000346330 ATP7BP35670 1465 aa16.03■□□□□ 0.16
UBE2A-201ENST00000346330 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
UBE2A-201ENST00000346330 DEFB132Q7Z7B7 95 aa16.02■□□□□ 0.16
UBE2A-201ENST00000346330 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
UBE2A-201ENST00000346330 GPRASP1Q5JY77 1395 aa16.01■□□□□ 0.15
UBE2A-201ENST00000346330 ONECUT3O60422 494 aaPredicted RBP16.01■□□□□ 0.15
UBE2A-201ENST00000346330 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
UBE2A-201ENST00000346330 ARHGEF28Q8N1W1 1705 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms