RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ATP10BO94823 1461 aa19.25■□□□□ 0.67
PTPRU-201ENST00000345512 MCM4P33991 863 aa19.25■□□□□ 0.67
PTPRU-201ENST00000345512 KCNJ4P48050 445 aa19.24■□□□□ 0.67
PTPRU-201ENST00000345512 ARHGEF12Q9NZN5 1544 aa19.24■□□□□ 0.67
PTPRU-201ENST00000345512 ADGRF5Q8IZF2 1346 aa19.23■□□□□ 0.67
PTPRU-201ENST00000345512 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
PTPRU-201ENST00000345512 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
PTPRU-201ENST00000345512 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
PTPRU-201ENST00000345512 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
PTPRU-201ENST00000345512 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
PTPRU-201ENST00000345512 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
PTPRU-201ENST00000345512 ARID3AQ99856 593 aa19.22■□□□□ 0.67
PTPRU-201ENST00000345512 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
PTPRU-201ENST00000345512 TBC1D2Q9BYX2 928 aa19.21■□□□□ 0.67
PTPRU-201ENST00000345512 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
PTPRU-201ENST00000345512 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
PTPRU-201ENST00000345512 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
PTPRU-201ENST00000345512 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
PTPRU-201ENST00000345512 GNAI1P63096 354 aa19.21■□□□□ 0.67
PTPRU-201ENST00000345512 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.66
PTPRU-201ENST00000345512 COG3Q96JB2 828 aa19.2■□□□□ 0.66
PTPRU-201ENST00000345512 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-201ENST00000345512 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-201ENST00000345512 DISP1Q96F81 1524 aa19.19■□□□□ 0.66
PTPRU-201ENST00000345512 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-201ENST00000345512 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-201ENST00000345512 KIAA1211Q6ZU35 1233 aa19.19■□□□□ 0.66
PTPRU-201ENST00000345512 SYAP1Q96A49 352 aaPredicted RBP19.18■□□□□ 0.66
PTPRU-201ENST00000345512 TMEM57Q8N5G2 664 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 PCDHB15Q9Y5E8 787 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 TMPOP42166 694 aaKnown RBP19.17■□□□□ 0.66
PTPRU-201ENST00000345512 CDC45O75419 566 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 ADGRL2O95490 1459 aa19.17■□□□□ 0.66
PTPRU-201ENST00000345512 RILPL2Q969X0 211 aa19.16■□□□□ 0.66
PTPRU-201ENST00000345512 GOLGA6L4A6NEF3 574 aa19.15■□□□□ 0.66
PTPRU-201ENST00000345512 REC8O95072 547 aa19.15■□□□□ 0.66
PTPRU-201ENST00000345512 KDM2BQ8NHM5 1336 aa19.15■□□□□ 0.66
PTPRU-201ENST00000345512 COL17A1Q9UMD9 1497 aaPredicted RBP19.15■□□□□ 0.66
PTPRU-201ENST00000345512 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
PTPRU-201ENST00000345512 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
PTPRU-201ENST00000345512 KIAA2012Q0VF49 1180 aa19.14■□□□□ 0.66
PTPRU-201ENST00000345512 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.65
PTPRU-201ENST00000345512 TBC1D32Q96NH3 1257 aa19.14■□□□□ 0.65
PTPRU-201ENST00000345512 NUCB2P80303 420 aa19.14■□□□□ 0.65
PTPRU-201ENST00000345512 INTS3Q68E01 1043 aaKnown RBP19.14■□□□□ 0.65
PTPRU-201ENST00000345512 SEC24BO95487 1268 aa19.13■□□□□ 0.65
PTPRU-201ENST00000345512 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
PTPRU-201ENST00000345512 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
PTPRU-201ENST00000345512 GCC1Q96CN9 775 aa19.13■□□□□ 0.65
PTPRU-201ENST00000345512 GRPEL1Q9HAV7 217 aa19.13■□□□□ 0.65
PTPRU-201ENST00000345512 NASPP49321 788 aaPredicted RBP19.12■□□□□ 0.65
PTPRU-201ENST00000345512 VSIG10Q8N0Z9 540 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 NUP160Q12769 1436 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 TNNQ9UQP3 1299 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 LMOD2Q6P5Q4 547 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 SHANK2Q9UPX8 1470 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 FGD1P98174 961 aa19.12■□□□□ 0.65
PTPRU-201ENST00000345512 TRIM27P14373 513 aa19.11■□□□□ 0.65
PTPRU-201ENST00000345512 TWISTNBQ3B726 338 aaPredicted RBP19.11■□□□□ 0.65
PTPRU-201ENST00000345512 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
PTPRU-201ENST00000345512 A2MP01023 1474 aa19.1■□□□□ 0.65
PTPRU-201ENST00000345512 SYCP2Q9BX26 1530 aa19.1■□□□□ 0.65
PTPRU-201ENST00000345512 CHAF1AQ13111 956 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-201ENST00000345512 RLBP1P12271 317 aa19.09■□□□□ 0.65
PTPRU-201ENST00000345512 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
PTPRU-201ENST00000345512 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
PTPRU-201ENST00000345512 AMPHP49418 695 aa19.09■□□□□ 0.65
PTPRU-201ENST00000345512 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.65
PTPRU-201ENST00000345512 K7ELQ4 463 aaPredicted RBP19.08■□□□□ 0.64
PTPRU-201ENST00000345512 ZRSR1Q15695 479 aaKnown RBP19.08■□□□□ 0.64
PTPRU-201ENST00000345512 CAVIN1Q6NZI2 390 aaKnown RBP19.08■□□□□ 0.64
PTPRU-201ENST00000345512 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
PTPRU-201ENST00000345512 BLMP54132 1417 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-201ENST00000345512 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
PTPRU-201ENST00000345512 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
PTPRU-201ENST00000345512 DRC7Q8IY82 874 aa19.06■□□□□ 0.64
PTPRU-201ENST00000345512 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
PTPRU-201ENST00000345512 KDM5CP41229 1560 aa19.06■□□□□ 0.64
PTPRU-201ENST00000345512 PIK3C2GO75747 1445 aa19.06■□□□□ 0.64
PTPRU-201ENST00000345512 ZMYM4Q5VZL5 1548 aa19.06■□□□□ 0.64
PTPRU-201ENST00000345512 LTV1Q96GA3 475 aaPredicted RBP19.06■□□□□ 0.64
PTPRU-201ENST00000345512 NGDNQ8NEJ9 315 aaKnown RBP19.05■□□□□ 0.64
PTPRU-201ENST00000345512 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
PTPRU-201ENST00000345512 NAP1L2Q9ULW6 460 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-201ENST00000345512 RABEP1Q15276 862 aa19.05■□□□□ 0.64
PTPRU-201ENST00000345512 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-201ENST00000345512 PHF14O94880 888 aa19.04■□□□□ 0.64
PTPRU-201ENST00000345512 ESPNB1AK53 854 aa19.04■□□□□ 0.64
PTPRU-201ENST00000345512 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-201ENST00000345512 RPGRIP1LQ68CZ1 1315 aa19.04■□□□□ 0.64
PTPRU-201ENST00000345512 ISY1Q9ULR0 285 aaKnown RBP19.04■□□□□ 0.64
PTPRU-201ENST00000345512 FCHSD2O94868 740 aa19.03■□□□□ 0.64
PTPRU-201ENST00000345512 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPRU-201ENST00000345512 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
PTPRU-201ENST00000345512 NOS1P29475 1434 aa19.02■□□□□ 0.64
PTPRU-201ENST00000345512 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.63
PTPRU-201ENST00000345512 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.63
PTPRU-201ENST00000345512 RNF214Q8ND24 703 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms