RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 SHPRHQ149N8 1683 aa27.47■■□□□ 1.99
CCDC78-202ENST00000345165 STK26Q9P289 416 aa27.47■■□□□ 1.99
CCDC78-202ENST00000345165 ADGRB2O60241 1585 aa27.47■■□□□ 1.99
CCDC78-202ENST00000345165 FMN2Q9NZ56 1722 aa27.46■■□□□ 1.99
CCDC78-202ENST00000345165 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.98
CCDC78-202ENST00000345165 WAPLQ7Z5K2 1190 aa27.43■■□□□ 1.98
CCDC78-202ENST00000345165 PLEKHH1Q9ULM0 1364 aa27.43■■□□□ 1.98
CCDC78-202ENST00000345165 ARHGEF28Q8N1W1 1705 aaKnown RBP27.4■■□□□ 1.98
CCDC78-202ENST00000345165 KIF1AQ12756 1690 aa27.38■■□□□ 1.97
CCDC78-202ENST00000345165 SPATA31A6Q5VVP1 1343 aa27.38■■□□□ 1.97
CCDC78-202ENST00000345165 PRAM1Q96QH2 718 aa27.36■■□□□ 1.97
CCDC78-202ENST00000345165 ANKARQ7Z5J8 1434 aa27.33■■□□□ 1.97
CCDC78-202ENST00000345165 LRRC59Q96AG4 307 aaKnown RBP27.33■■□□□ 1.97
CCDC78-202ENST00000345165 SOS2Q07890 1332 aaPredicted RBP27.33■■□□□ 1.97
CCDC78-202ENST00000345165 L3MBTL2Q969R5 705 aa27.32■■□□□ 1.96
CCDC78-202ENST00000345165 EIF3AQ14152 1382 aaKnown RBP27.32■■□□□ 1.96
CCDC78-202ENST00000345165 ORAI2Q96SN7 254 aa27.31■■□□□ 1.96
CCDC78-202ENST00000345165 POGKQ9P215 609 aa27.31■■□□□ 1.96
CCDC78-202ENST00000345165 TRPM1Q7Z4N2 1603 aa27.3■■□□□ 1.96
CCDC78-202ENST00000345165 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
CCDC78-202ENST00000345165 TRAK1Q9UPV9 953 aa27.3■■□□□ 1.96
CCDC78-202ENST00000345165 NPHP3Q7Z494 1330 aa27.3■■□□□ 1.96
CCDC78-202ENST00000345165 PXDNQ92626 1479 aa27.27■■□□□ 1.96
CCDC78-202ENST00000345165 ESCO1Q5FWF5 840 aa27.26■■□□□ 1.95
CCDC78-202ENST00000345165 USP32Q8NFA0 1604 aa27.26■■□□□ 1.95
CCDC78-202ENST00000345165 COL22A1Q8NFW1 1626 aaPredicted RBP27.26■■□□□ 1.95
CCDC78-202ENST00000345165 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.95
CCDC78-202ENST00000345165 PHF23Q9BUL5 403 aaPredicted RBP27.25■■□□□ 1.95
CCDC78-202ENST00000345165 RGPD8O14715 1765 aaPredicted RBP27.25■■□□□ 1.95
CCDC78-202ENST00000345165 PNPLA6Q8IY17 1366 aa27.24■■□□□ 1.95
CCDC78-202ENST00000345165 LRP6O75581 1613 aa27.23■■□□□ 1.95
CCDC78-202ENST00000345165 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
CCDC78-202ENST00000345165 ITSN1Q15811 1721 aa27.21■■□□□ 1.95
CCDC78-202ENST00000345165 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
CCDC78-202ENST00000345165 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
CCDC78-202ENST00000345165 DDX17Q92841 729 aaKnown RBP27.19■■□□□ 1.94
CCDC78-202ENST00000345165 WASLO00401 505 aaPredicted RBP27.18■■□□□ 1.94
CCDC78-202ENST00000345165 ILDR2Q71H61 639 aa27.18■■□□□ 1.94
CCDC78-202ENST00000345165 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
CCDC78-202ENST00000345165 TONSLQ96HA7 1378 aa27.17■■□□□ 1.94
CCDC78-202ENST00000345165 CLSPNQ9HAW4 1339 aa27.16■■□□□ 1.94
CCDC78-202ENST00000345165 FOXO3O43524 673 aa27.16■■□□□ 1.94
CCDC78-202ENST00000345165 PHF8Q9UPP1 1060 aa27.16■■□□□ 1.94
CCDC78-202ENST00000345165 MINK1Q8N4C8 1332 aaPredicted RBP27.16■■□□□ 1.94
CCDC78-202ENST00000345165 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.94
CCDC78-202ENST00000345165 ATP7BP35670 1465 aa27.14■■□□□ 1.94
CCDC78-202ENST00000345165 NUTM2FA1L443 756 aa27.14■■□□□ 1.94
CCDC78-202ENST00000345165 RGS17Q9UGC6 210 aaPredicted RBP27.14■■□□□ 1.94
CCDC78-202ENST00000345165 TOPAZ1Q8N9V7 1692 aa27.13■■□□□ 1.93
CCDC78-202ENST00000345165 ROCK2O75116 1388 aaKnown RBP27.12■■□□□ 1.93
CCDC78-202ENST00000345165 CENPJQ9HC77 1338 aaPredicted RBP27.12■■□□□ 1.93
CCDC78-202ENST00000345165 RALGAPBQ86X10 1494 aa27.12■■□□□ 1.93
CCDC78-202ENST00000345165 SBNO1A3KN83 1393 aa27.11■■□□□ 1.93
CCDC78-202ENST00000345165 HIRIP3Q9BW71 556 aaPredicted RBP27.11■■□□□ 1.93
CCDC78-202ENST00000345165 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
CCDC78-202ENST00000345165 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
CCDC78-202ENST00000345165 PSME1Q06323 249 aa27.08■■□□□ 1.93
CCDC78-202ENST00000345165 SPATA31A3Q5VYP0 1347 aa27.08■■□□□ 1.93
CCDC78-202ENST00000345165 TRPM3Q9HCF6 1732 aaPredicted RBP27.07■■□□□ 1.92
CCDC78-202ENST00000345165 MEX3CQ5U5Q3 659 aaKnown RBP27.07■■□□□ 1.92
CCDC78-202ENST00000345165 MARF1Q9Y4F3 1742 aaKnown RBP27.07■■□□□ 1.92
CCDC78-202ENST00000345165 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
CCDC78-202ENST00000345165 ZNF772Q68DY9 489 aaPredicted RBP27.05■■□□□ 1.92
CCDC78-202ENST00000345165 KRT28Q7Z3Y7 464 aa27.05■■□□□ 1.92
CCDC78-202ENST00000345165 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
CCDC78-202ENST00000345165 ARHGEF10O15013 1369 aa27.04■■□□□ 1.92
CCDC78-202ENST00000345165 SOCS7O14512 581 aa27.03■■□□□ 1.92
CCDC78-202ENST00000345165 ALS2Q96Q42 1657 aa27.03■■□□□ 1.92
CCDC78-202ENST00000345165 CDK19Q9BWU1 502 aa27.03■■□□□ 1.92
CCDC78-202ENST00000345165 TIMELESSQ9UNS1 1208 aa27.03■■□□□ 1.92
CCDC78-202ENST00000345165 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
CCDC78-202ENST00000345165 POLR3AO14802 1390 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-202ENST00000345165 NUTM2BA6NNL0 878 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-202ENST00000345165 NUTM2EB1AL46 878 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-202ENST00000345165 NUTM2AQ8IVF1 878 aaPredicted RBP27.01■■□□□ 1.91
CCDC78-202ENST00000345165 XPCQ01831 940 aaPredicted RBP27■■□□□ 1.91
CCDC78-202ENST00000345165 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
CCDC78-202ENST00000345165 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
CCDC78-202ENST00000345165 ABCA3Q99758 1704 aa26.99■■□□□ 1.91
CCDC78-202ENST00000345165 POTEAQ6S8J7 498 aa26.98■■□□□ 1.91
CCDC78-202ENST00000345165 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
CCDC78-202ENST00000345165 PMFBP1Q8TBY8 1022 aa26.97■■□□□ 1.91
CCDC78-202ENST00000345165 BRD4O60885 1362 aaPredicted RBP26.95■■□□□ 1.9
CCDC78-202ENST00000345165 AFF2P51816 1311 aa26.94■■□□□ 1.9
CCDC78-202ENST00000345165 EVC2Q86UK5 1308 aa26.94■■□□□ 1.9
CCDC78-202ENST00000345165 CARD11Q9BXL7 1154 aa26.94■■□□□ 1.9
CCDC78-202ENST00000345165 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
CCDC78-202ENST00000345165 NGDNQ8NEJ9 315 aaKnown RBP26.93■■□□□ 1.9
CCDC78-202ENST00000345165 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
CCDC78-202ENST00000345165 FNBP4Q8N3X1 1017 aaPredicted RBP26.92■■□□□ 1.9
CCDC78-202ENST00000345165 C8orf37Q96NL8 207 aa26.92■■□□□ 1.9
CCDC78-202ENST00000345165 CRYBG1Q9Y4K1 1723 aa26.92■■□□□ 1.9
CCDC78-202ENST00000345165 SRPK2P78362 688 aaKnown RBP26.91■■□□□ 1.9
CCDC78-202ENST00000345165 PPIP5K1Q6PFW1 1433 aa26.9■■□□□ 1.9
CCDC78-202ENST00000345165 ADAMTS2O95450 1211 aa26.89■■□□□ 1.9
CCDC78-202ENST00000345165 NGLY1Q96IV0 654 aa26.88■■□□□ 1.89
CCDC78-202ENST00000345165 ACEP12821 1306 aa26.88■■□□□ 1.89
CCDC78-202ENST00000345165 ATAD2Q6PL18 1390 aa26.87■■□□□ 1.89
CCDC78-202ENST00000345165 NWD2Q9ULI1 1742 aa26.87■■□□□ 1.89
CCDC78-202ENST00000345165 SLC24A1O60721 1099 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms