RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 ATAD2Q6PL18 1390 aa12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
CPSF4L-201ENST00000344935 ITGAEP38570 1179 aa12.42□□□□□ -0.42
CPSF4L-201ENST00000344935 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
CPSF4L-201ENST00000344935 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
CPSF4L-201ENST00000344935 PIK3C2GO75747 1445 aa12.42□□□□□ -0.42
CPSF4L-201ENST00000344935 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
CPSF4L-201ENST00000344935 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
CPSF4L-201ENST00000344935 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
CPSF4L-201ENST00000344935 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
CPSF4L-201ENST00000344935 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 QTRT2Q9H974 415 aaKnown RBP12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 LRPPRCP42704 1394 aaKnown RBP12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 ABCC11Q96J66 1382 aa12.4□□□□□ -0.42
CPSF4L-201ENST00000344935 DDX17Q92841 729 aaKnown RBP12.39□□□□□ -0.43
CPSF4L-201ENST00000344935 TRPC5Q9UL62 973 aaPredicted RBP12.39□□□□□ -0.43
CPSF4L-201ENST00000344935 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
CPSF4L-201ENST00000344935 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
CPSF4L-201ENST00000344935 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
CPSF4L-201ENST00000344935 SLIT2O94813 1529 aa12.37□□□□□ -0.43
CPSF4L-201ENST00000344935 GLI3P10071 1580 aa12.37□□□□□ -0.43
CPSF4L-201ENST00000344935 PLCH1Q4KWH8 1693 aa12.36□□□□□ -0.43
CPSF4L-201ENST00000344935 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
CPSF4L-201ENST00000344935 USP21Q9UK80 565 aa12.36□□□□□ -0.43
CPSF4L-201ENST00000344935 DLC1Q96QB1 1528 aa12.36□□□□□ -0.43
CPSF4L-201ENST00000344935 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
CPSF4L-201ENST00000344935 RGPD8O14715 1765 aaPredicted RBP12.34□□□□□ -0.43
CPSF4L-201ENST00000344935 ADAMTS2O95450 1211 aa12.34□□□□□ -0.43
CPSF4L-201ENST00000344935 FOXD1Q16676 465 aa12.34□□□□□ -0.43
CPSF4L-201ENST00000344935 SIRT1Q96EB6 747 aa12.34□□□□□ -0.43
CPSF4L-201ENST00000344935 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
CPSF4L-201ENST00000344935 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
CPSF4L-201ENST00000344935 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
CPSF4L-201ENST00000344935 TRPM3Q9HCF6 1732 aaPredicted RBP12.32□□□□□ -0.44
CPSF4L-201ENST00000344935 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
CPSF4L-201ENST00000344935 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
CPSF4L-201ENST00000344935 LRP5O75197 1615 aa12.32□□□□□ -0.44
CPSF4L-201ENST00000344935 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
CPSF4L-201ENST00000344935 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
CPSF4L-201ENST00000344935 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
CPSF4L-201ENST00000344935 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
CPSF4L-201ENST00000344935 SPATA31A3Q5VYP0 1347 aa12.31□□□□□ -0.44
CPSF4L-201ENST00000344935 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
CPSF4L-201ENST00000344935 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
CPSF4L-201ENST00000344935 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
CPSF4L-201ENST00000344935 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
CPSF4L-201ENST00000344935 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
CPSF4L-201ENST00000344935 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
CPSF4L-201ENST00000344935 PLEKHH1Q9ULM0 1364 aa12.29□□□□□ -0.44
CPSF4L-201ENST00000344935 FOXO3O43524 673 aa12.28□□□□□ -0.44
CPSF4L-201ENST00000344935 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
CPSF4L-201ENST00000344935 ITSN1Q15811 1721 aa12.27□□□□□ -0.45
CPSF4L-201ENST00000344935 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
CPSF4L-201ENST00000344935 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
CPSF4L-201ENST00000344935 C14orf93Q9H972 538 aaKnown RBP12.26□□□□□ -0.45
CPSF4L-201ENST00000344935 TULP4Q9NRJ4 1543 aa12.26□□□□□ -0.45
CPSF4L-201ENST00000344935 MPHOSPH9Q99550 1183 aa12.25□□□□□ -0.45
CPSF4L-201ENST00000344935 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
CPSF4L-201ENST00000344935 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
CPSF4L-201ENST00000344935 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
CPSF4L-201ENST00000344935 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
CPSF4L-201ENST00000344935 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
CPSF4L-201ENST00000344935 WAPLQ7Z5K2 1190 aa12.24□□□□□ -0.45
CPSF4L-201ENST00000344935 THSD7AQ9UPZ6 1657 aa12.24□□□□□ -0.45
CPSF4L-201ENST00000344935 VPS72Q15906 364 aa12.23□□□□□ -0.45
CPSF4L-201ENST00000344935 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
CPSF4L-201ENST00000344935 PSME1Q06323 249 aa12.22□□□□□ -0.45
CPSF4L-201ENST00000344935 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
CPSF4L-201ENST00000344935 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
CPSF4L-201ENST00000344935 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
CPSF4L-201ENST00000344935 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
CPSF4L-201ENST00000344935 TMEM132EQ6IEE7 984 aa12.21□□□□□ -0.45
CPSF4L-201ENST00000344935 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
CPSF4L-201ENST00000344935 STK26Q9P289 416 aa12.21□□□□□ -0.45
CPSF4L-201ENST00000344935 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
CPSF4L-201ENST00000344935 KIAA1210Q9ULL0 1709 aa12.2□□□□□ -0.46
CPSF4L-201ENST00000344935 PHRF1Q9P1Y6 1649 aaKnown RBP12.2□□□□□ -0.46
CPSF4L-201ENST00000344935 RGL3Q3MIN7 710 aa12.2□□□□□ -0.46
CPSF4L-201ENST00000344935 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
CPSF4L-201ENST00000344935 ATP7BP35670 1465 aa12.19□□□□□ -0.46
CPSF4L-201ENST00000344935 NUTM2FA1L443 756 aa12.16□□□□□ -0.46
CPSF4L-201ENST00000344935 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
CPSF4L-201ENST00000344935 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
CPSF4L-201ENST00000344935 PRAM1Q96QH2 718 aa12.16□□□□□ -0.46
CPSF4L-201ENST00000344935 GPRASP1Q5JY77 1395 aa12.15□□□□□ -0.46
CPSF4L-201ENST00000344935 RREB1Q92766 1687 aa12.14□□□□□ -0.47
CPSF4L-201ENST00000344935 KRT27Q7Z3Y8 459 aa12.14□□□□□ -0.47
CPSF4L-201ENST00000344935 NRKQ7Z2Y5 1582 aa12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 RGPD3A6NKT7 1758 aaPredicted RBP12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 RGPD4Q7Z3J3 1758 aa12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 RAB3GAP2Q9H2M9 1393 aa12.13□□□□□ -0.47
CPSF4L-201ENST00000344935 PRR36Q9H6K5 1346 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms