RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
GDNF-202ENST00000344622 NWD1Q149M9 1564 aa10.3□□□□□ -0.76
GDNF-202ENST00000344622 DLC1Q96QB1 1528 aa10.3□□□□□ -0.76
GDNF-202ENST00000344622 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 MIER1Q8N108 512 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 BCANQ96GW7 911 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 CARD14Q9BXL6 1004 aa10.29□□□□□ -0.76
GDNF-202ENST00000344622 NKTRP30414 1462 aaKnown RBP10.29□□□□□ -0.76
GDNF-202ENST00000344622 CENPJQ9HC77 1338 aaPredicted RBP10.29□□□□□ -0.76
GDNF-202ENST00000344622 TOPAZ1Q8N9V7 1692 aa10.28□□□□□ -0.76
GDNF-202ENST00000344622 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
GDNF-202ENST00000344622 TBX22Q9Y458 520 aa10.28□□□□□ -0.76
GDNF-202ENST00000344622 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
GDNF-202ENST00000344622 YTHDC1Q96MU7 727 aaKnown RBP10.28□□□□□ -0.76
GDNF-202ENST00000344622 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.28□□□□□ -0.76
GDNF-202ENST00000344622 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
GDNF-202ENST00000344622 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.76
GDNF-202ENST00000344622 SLC12A5Q9H2X9 1139 aa10.27□□□□□ -0.76
GDNF-202ENST00000344622 EID1Q9Y6B2 187 aa10.27□□□□□ -0.76
GDNF-202ENST00000344622 ADGRB2O60241 1585 aa10.26□□□□□ -0.77
GDNF-202ENST00000344622 ATP7BP35670 1465 aa10.26□□□□□ -0.77
GDNF-202ENST00000344622 SBNO2Q9Y2G9 1366 aa10.26□□□□□ -0.77
GDNF-202ENST00000344622 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
GDNF-202ENST00000344622 PTCH1Q13635 1447 aa10.25□□□□□ -0.77
GDNF-202ENST00000344622 FMN2Q9NZ56 1722 aa10.25□□□□□ -0.77
GDNF-202ENST00000344622 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
GDNF-202ENST00000344622 FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
GDNF-202ENST00000344622 CDK19Q9BWU1 502 aa10.23□□□□□ -0.77
GDNF-202ENST00000344622 FBLN1P23142 703 aa10.23□□□□□ -0.77
GDNF-202ENST00000344622 AKAP12Q02952 1782 aa10.23□□□□□ -0.77
GDNF-202ENST00000344622 LTBP4Q8N2S1 1624 aa10.23□□□□□ -0.77
GDNF-202ENST00000344622 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
GDNF-202ENST00000344622 PANK3Q9H999 370 aa10.22□□□□□ -0.77
GDNF-202ENST00000344622 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
GDNF-202ENST00000344622 DDX17Q92841 729 aaKnown RBP10.22□□□□□ -0.77
GDNF-202ENST00000344622 A0A1W2PP64 1363 aa10.21□□□□□ -0.77
GDNF-202ENST00000344622 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.78
GDNF-202ENST00000344622 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
GDNF-202ENST00000344622 WASLO00401 505 aaPredicted RBP10.2□□□□□ -0.78
GDNF-202ENST00000344622 CABP1Q9NZU7 370 aa10.2□□□□□ -0.78
GDNF-202ENST00000344622 TMEM94Q12767 1356 aa10.2□□□□□ -0.78
GDNF-202ENST00000344622 POGKQ9P215 609 aa10.2□□□□□ -0.78
GDNF-202ENST00000344622 TMF1P82094 1093 aa10.19□□□□□ -0.78
GDNF-202ENST00000344622 EIF3AQ14152 1382 aaKnown RBP10.19□□□□□ -0.78
GDNF-202ENST00000344622 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
GDNF-202ENST00000344622 ORAI2Q96SN7 254 aa10.18□□□□□ -0.78
GDNF-202ENST00000344622 PIK3R4Q99570 1358 aa10.18□□□□□ -0.78
GDNF-202ENST00000344622 CDC42BPGQ6DT37 1551 aa10.18□□□□□ -0.78
GDNF-202ENST00000344622 HDGFP51858 240 aaKnown RBP10.18□□□□□ -0.78
GDNF-202ENST00000344622 PMFBP1Q8TBY8 1022 aa10.18□□□□□ -0.78
GDNF-202ENST00000344622 PIK3C2AO00443 1686 aa10.17□□□□□ -0.78
GDNF-202ENST00000344622 CPSF1Q10570 1443 aaKnown RBP10.17□□□□□ -0.78
GDNF-202ENST00000344622 ITSN1Q15811 1721 aa10.17□□□□□ -0.78
GDNF-202ENST00000344622 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
GDNF-202ENST00000344622 SRPK2P78362 688 aaKnown RBP10.17□□□□□ -0.78
GDNF-202ENST00000344622 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
GDNF-202ENST00000344622 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
GDNF-202ENST00000344622 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
GDNF-202ENST00000344622 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
GDNF-202ENST00000344622 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.78
GDNF-202ENST00000344622 KIF20BQ96Q89 1820 aa10.15□□□□□ -0.78
GDNF-202ENST00000344622 TMC1Q8TDI8 760 aa10.15□□□□□ -0.78
GDNF-202ENST00000344622 PRKRIP1Q9H875 184 aaPredicted RBP10.15□□□□□ -0.78
GDNF-202ENST00000344622 MST1RQ04912 1400 aa10.15□□□□□ -0.78
GDNF-202ENST00000344622 SSH2Q76I76 1423 aa10.15□□□□□ -0.78
GDNF-202ENST00000344622 TRPM3Q9HCF6 1732 aaPredicted RBP10.15□□□□□ -0.79
GDNF-202ENST00000344622 EVC2Q86UK5 1308 aa10.15□□□□□ -0.79
GDNF-202ENST00000344622 XPCQ01831 940 aaPredicted RBP10.14□□□□□ -0.79
GDNF-202ENST00000344622 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
GDNF-202ENST00000344622 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
GDNF-202ENST00000344622 PROSER2Q86WR7 435 aaPredicted RBP10.13□□□□□ -0.79
GDNF-202ENST00000344622 ANKRD26Q9UPS8 1709 aa10.13□□□□□ -0.79
GDNF-202ENST00000344622 ACEP12821 1306 aa10.13□□□□□ -0.79
GDNF-202ENST00000344622 PEAK1Q9H792 1746 aa10.12□□□□□ -0.79
GDNF-202ENST00000344622 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
GDNF-202ENST00000344622 C1orf167Q5SNV9 1468 aa10.12□□□□□ -0.79
GDNF-202ENST00000344622 FYB1O15117 783 aa10.11□□□□□ -0.79
GDNF-202ENST00000344622 PARD3Q8TEW0 1356 aa10.11□□□□□ -0.79
GDNF-202ENST00000344622 SHPRHQ149N8 1683 aa10.11□□□□□ -0.79
GDNF-202ENST00000344622 CRYBG1Q9Y4K1 1723 aa10.11□□□□□ -0.79
GDNF-202ENST00000344622 NME9Q86XW9 330 aa10.11□□□□□ -0.79
GDNF-202ENST00000344622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.79
GDNF-202ENST00000344622 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
GDNF-202ENST00000344622 ALS2Q96Q42 1657 aa10.1□□□□□ -0.79
GDNF-202ENST00000344622 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
GDNF-202ENST00000344622 POLR3AO14802 1390 aaPredicted RBP10.1□□□□□ -0.79
GDNF-202ENST00000344622 TNNT2P45379 298 aaPredicted RBP10.09□□□□□ -0.79
GDNF-202ENST00000344622 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
GDNF-202ENST00000344622 RGPD5Q99666 1765 aa10.09□□□□□ -0.79
GDNF-202ENST00000344622 USP6P35125 1406 aa10.09□□□□□ -0.79
GDNF-202ENST00000344622 FOXO3O43524 673 aa10.09□□□□□ -0.79
GDNF-202ENST00000344622 NUTM2GQ5VZR2 741 aa10.09□□□□□ -0.79
GDNF-202ENST00000344622 RGPD2P0DJD1 1756 aa10.08□□□□□ -0.8
GDNF-202ENST00000344622 C19orf44Q9H6X5 657 aa10.08□□□□□ -0.8
GDNF-202ENST00000344622 PLEKHG3A1L390 1219 aa10.07□□□□□ -0.8
GDNF-202ENST00000344622 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
GDNF-202ENST00000344622 MED1Q15648 1581 aaPredicted RBP10.07□□□□□ -0.8
GDNF-202ENST00000344622 ATAD2Q6PL18 1390 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms