RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 RALBP1Q15311 655 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 RALGAPBQ86X10 1494 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 AK7Q96M32 723 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 ERCC6L2Q5T890 1561 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
SP140-201ENST00000343805 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
SP140-201ENST00000343805 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
SP140-201ENST00000343805 KTN1Q86UP2 1357 aaKnown RBP11.24□□□□□ -0.61
SP140-201ENST00000343805 TMEM51Q9NW97 253 aa11.24□□□□□ -0.61
SP140-201ENST00000343805 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
SP140-201ENST00000343805 UHRF1BP1Q6BDS2 1440 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 ARHGAP5Q13017 1502 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 PLEKHH2Q8IVE3 1493 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
SP140-201ENST00000343805 MFRPQ9BY79 579 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
SP140-201ENST00000343805 CROCC2H7BZ55 1655 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 UTP14CQ5TAP6 766 aaKnown RBP11.22□□□□□ -0.61
SP140-201ENST00000343805 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
SP140-201ENST00000343805 ABCA8O94911 1581 aa11.21□□□□□ -0.61
SP140-201ENST00000343805 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.61
SP140-201ENST00000343805 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.61
SP140-201ENST00000343805 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.62
SP140-201ENST00000343805 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.62
SP140-201ENST00000343805 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 CLCN1P35523 988 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 TMF1P82094 1093 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 TESK2Q96S53 571 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 ADCY10Q96PN6 1610 aa11.2□□□□□ -0.62
SP140-201ENST00000343805 PRAG1Q86YV5 1406 aa11.19□□□□□ -0.62
SP140-201ENST00000343805 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
SP140-201ENST00000343805 RNF123Q5XPI4 1314 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 SAMD9LQ8IVG5 1584 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 TPM2P07951 284 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 MMP14P50281 582 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
SP140-201ENST00000343805 PLA2R1Q13018 1463 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 SHANK2Q9UPX8 1470 aa11.18□□□□□ -0.62
SP140-201ENST00000343805 GPIHBP1Q8IV16 184 aa11.17□□□□□ -0.62
SP140-201ENST00000343805 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
SP140-201ENST00000343805 KNSTRNQ9Y448 316 aa11.17□□□□□ -0.62
SP140-201ENST00000343805 CNPY4Q8N129 248 aa11.17□□□□□ -0.62
SP140-201ENST00000343805 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
SP140-201ENST00000343805 A2MP01023 1474 aa11.16□□□□□ -0.62
SP140-201ENST00000343805 ARHGEF12Q9NZN5 1544 aa11.16□□□□□ -0.62
SP140-201ENST00000343805 EFCAB2Q5VUJ9 269 aa11.16□□□□□ -0.62
SP140-201ENST00000343805 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
SP140-201ENST00000343805 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
SP140-201ENST00000343805 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.62
SP140-201ENST00000343805 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.62
SP140-201ENST00000343805 KCNG1Q9UIX4 513 aa11.15□□□□□ -0.62
SP140-201ENST00000343805 PARD3Q8TEW0 1356 aa11.15□□□□□ -0.62
SP140-201ENST00000343805 MAP7D2Q96T17 732 aa11.15□□□□□ -0.63
SP140-201ENST00000343805 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
SP140-201ENST00000343805 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
SP140-201ENST00000343805 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
SP140-201ENST00000343805 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
SP140-201ENST00000343805 TICAM2Q86XR7 235 aa11.13□□□□□ -0.63
SP140-201ENST00000343805 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
SP140-201ENST00000343805 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
SP140-201ENST00000343805 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
SP140-201ENST00000343805 KIF3BO15066 747 aa11.13□□□□□ -0.63
SP140-201ENST00000343805 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
SP140-201ENST00000343805 PARP9Q8IXQ6 854 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 CLGNO14967 610 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 PDE4AP27815 886 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 CLASP1Q7Z460 1538 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 MCM6Q14566 821 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
SP140-201ENST00000343805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
SP140-201ENST00000343805 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
SP140-201ENST00000343805 FECHP22830 423 aa11.11□□□□□ -0.63
SP140-201ENST00000343805 PPP2R1AP30153 589 aa11.11□□□□□ -0.63
SP140-201ENST00000343805 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
SP140-201ENST00000343805 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
SP140-201ENST00000343805 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
SP140-201ENST00000343805 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
SP140-201ENST00000343805 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
SP140-201ENST00000343805 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
SP140-201ENST00000343805 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
SP140-201ENST00000343805 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
SP140-201ENST00000343805 DMTNQ08495 405 aa11.08□□□□□ -0.63
SP140-201ENST00000343805 CYB5RLQ6IPT4 315 aa11.08□□□□□ -0.63
SP140-201ENST00000343805 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
SP140-201ENST00000343805 IRX3P78415 501 aaPredicted RBP11.08□□□□□ -0.64
SP140-201ENST00000343805 HMGB1P09429 215 aaKnown RBP11.08□□□□□ -0.64
SP140-201ENST00000343805 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
SP140-201ENST00000343805 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
SP140-201ENST00000343805 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
SP140-201ENST00000343805 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
SP140-201ENST00000343805 APAF1O14727 1248 aa11.07□□□□□ -0.64
SP140-201ENST00000343805 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
SP140-201ENST00000343805 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms