RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 NINLQ9Y2I6 1382 aa27.04■■□□□ 1.92
E2F1-201ENST00000343380 RUNDC1Q96C34 613 aa27.03■■□□□ 1.92
E2F1-201ENST00000343380 NEURL4Q96JN8 1562 aa27.02■■□□□ 1.92
E2F1-201ENST00000343380 PHF23Q9BUL5 403 aaPredicted RBP27.02■■□□□ 1.92
E2F1-201ENST00000343380 FANCAO15360 1455 aa27.02■■□□□ 1.92
E2F1-201ENST00000343380 MROH2AA6NES4 1674 aa27.02■■□□□ 1.92
E2F1-201ENST00000343380 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.01■■□□□ 1.91
E2F1-201ENST00000343380 NOS1P29475 1434 aa27.01■■□□□ 1.91
E2F1-201ENST00000343380 ARAP3Q8WWN8 1544 aa27.01■■□□□ 1.91
E2F1-201ENST00000343380 SBNO2Q9Y2G9 1366 aa27■■□□□ 1.91
E2F1-201ENST00000343380 CHGAP10645 457 aaKnown RBP27■■□□□ 1.91
E2F1-201ENST00000343380 SLKQ9H2G2 1235 aaPredicted RBP27■■□□□ 1.91
E2F1-201ENST00000343380 IQSEC2Q5JU85 1478 aa26.99■■□□□ 1.91
E2F1-201ENST00000343380 NRXN1Q9ULB1 1477 aa26.99■■□□□ 1.91
E2F1-201ENST00000343380 MTHFSP49914 203 aa26.99■■□□□ 1.91
E2F1-201ENST00000343380 TMEM132EQ6IEE7 984 aa26.98■■□□□ 1.91
E2F1-201ENST00000343380 IFT172Q9UG01 1749 aa26.98■■□□□ 1.91
E2F1-201ENST00000343380 KIF1BO60333 1816 aa26.97■■□□□ 1.91
E2F1-201ENST00000343380 MYO3AQ8NEV4 1616 aa26.97■■□□□ 1.91
E2F1-201ENST00000343380 POGKQ9P215 609 aa26.97■■□□□ 1.91
E2F1-201ENST00000343380 PDZRN3Q9UPQ7 1066 aa26.97■■□□□ 1.91
E2F1-201ENST00000343380 EFCAB6Q5THR3 1501 aa26.96■■□□□ 1.91
E2F1-201ENST00000343380 PMFBP1Q8TBY8 1022 aa26.95■■□□□ 1.9
E2F1-201ENST00000343380 ADGRL1O94910 1474 aa26.94■■□□□ 1.9
E2F1-201ENST00000343380 WDR63Q8IWG1 891 aa26.94■■□□□ 1.9
E2F1-201ENST00000343380 PPRC1Q5VV67 1664 aaKnown RBP26.93■■□□□ 1.9
E2F1-201ENST00000343380 ABCA9Q8IUA7 1624 aa26.93■■□□□ 1.9
E2F1-201ENST00000343380 ANTXR1Q9H6X2 564 aa26.92■■□□□ 1.9
E2F1-201ENST00000343380 BECN1Q14457 450 aa26.91■■□□□ 1.9
E2F1-201ENST00000343380 TBC1D32Q96NH3 1257 aa26.9■■□□□ 1.9
E2F1-201ENST00000343380 ZNF518AQ6AHZ1 1483 aa26.9■■□□□ 1.9
E2F1-201ENST00000343380 C14orf93Q9H972 538 aaKnown RBP26.9■■□□□ 1.9
E2F1-201ENST00000343380 TBC1D2Q9BYX2 928 aa26.87■■□□□ 1.89
E2F1-201ENST00000343380 ADGRB3O60242 1522 aa26.87■■□□□ 1.89
E2F1-201ENST00000343380 CCDC27Q2M243 656 aa26.86■■□□□ 1.89
E2F1-201ENST00000343380 SETBP1Q9Y6X0 1596 aa26.86■■□□□ 1.89
E2F1-201ENST00000343380 QRICH2Q9H0J4 1663 aa26.86■■□□□ 1.89
E2F1-201ENST00000343380 ADGRB1O14514 1584 aa26.86■■□□□ 1.89
E2F1-201ENST00000343380 U2AF1L5P0DN76 240 aaPredicted RBP26.85■■□□□ 1.89
E2F1-201ENST00000343380 U2AF1Q01081 240 aaKnown RBP eCLIP26.85■■□□□ 1.89
E2F1-201ENST00000343380 TSR2Q969E8 191 aaKnown RBP26.85■■□□□ 1.89
E2F1-201ENST00000343380 AAMPQ13685 434 aa26.84■■□□□ 1.89
E2F1-201ENST00000343380 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
E2F1-201ENST00000343380 RWDD1Q9H446 243 aaPredicted RBP26.84■■□□□ 1.89
E2F1-201ENST00000343380 CFAP65Q6ZU64 1925 aaKnown RBP26.84■■□□□ 1.89
E2F1-201ENST00000343380 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
E2F1-201ENST00000343380 ZC3H13Q5T200 1668 aaKnown RBP26.84■■□□□ 1.89
E2F1-201ENST00000343380 CFAP53Q96M91 514 aa26.83■■□□□ 1.89
E2F1-201ENST00000343380 UPF2Q9HAU5 1272 aaKnown RBP26.82■■□□□ 1.88
E2F1-201ENST00000343380 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 SPRYD3Q8NCJ5 442 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 MYH16Q9H6N6 1097 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 KIDINS220Q9ULH0 1771 aa26.82■■□□□ 1.88
E2F1-201ENST00000343380 NPATQ14207 1427 aa26.81■■□□□ 1.88
E2F1-201ENST00000343380 ZKSCAN2Q63HK3 967 aa26.78■■□□□ 1.88
E2F1-201ENST00000343380 GGT6Q6P531 493 aa26.78■■□□□ 1.88
E2F1-201ENST00000343380 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
E2F1-201ENST00000343380 ZMYM3Q14202 1370 aa26.78■■□□□ 1.88
E2F1-201ENST00000343380 DZIP1LQ8IYY4 767 aaKnown RBP26.78■■□□□ 1.88
E2F1-201ENST00000343380 CABP2Q9NPB3 220 aa26.77■■□□□ 1.88
E2F1-201ENST00000343380 FTSJ3Q8IY81 847 aaKnown RBP26.77■■□□□ 1.88
E2F1-201ENST00000343380 PPLO60437 1756 aa26.76■■□□□ 1.88
E2F1-201ENST00000343380 PRKCSHP14314 528 aaPredicted RBP26.76■■□□□ 1.87
E2F1-201ENST00000343380 EXOSC9Q06265 439 aaKnown RBP26.76■■□□□ 1.87
E2F1-201ENST00000343380 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
E2F1-201ENST00000343380 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
E2F1-201ENST00000343380 USP32Q8NFA0 1604 aa26.75■■□□□ 1.87
E2F1-201ENST00000343380 TRIM27P14373 513 aa26.74■■□□□ 1.87
E2F1-201ENST00000343380 SMC4Q9NTJ3 1288 aa26.74■■□□□ 1.87
E2F1-201ENST00000343380 TULP4Q9NRJ4 1543 aa26.74■■□□□ 1.87
E2F1-201ENST00000343380 ANKRD36BQ8N2N9 1353 aa26.73■■□□□ 1.87
E2F1-201ENST00000343380 SSH1Q8WYL5 1049 aa26.73■■□□□ 1.87
E2F1-201ENST00000343380 CD109Q6YHK3 1445 aa26.72■■□□□ 1.87
E2F1-201ENST00000343380 EVC2Q86UK5 1308 aa26.72■■□□□ 1.87
E2F1-201ENST00000343380 PLEKHF1Q96S99 279 aa26.72■■□□□ 1.87
E2F1-201ENST00000343380 TRIM35Q9UPQ4 493 aa26.72■■□□□ 1.87
E2F1-201ENST00000343380 U2SURPO15042 1029 aaKnown RBP26.71■■□□□ 1.87
E2F1-201ENST00000343380 MFAP1P55081 439 aaKnown RBP26.71■■□□□ 1.87
E2F1-201ENST00000343380 FAM43AQ8N2R8 423 aa26.71■■□□□ 1.87
E2F1-201ENST00000343380 ADGRB2O60241 1585 aa26.7■■□□□ 1.87
E2F1-201ENST00000343380 ASXL2Q76L83 1435 aa26.7■■□□□ 1.86
E2F1-201ENST00000343380 C22orf23Q9BZE7 217 aa26.69■■□□□ 1.86
E2F1-201ENST00000343380 TMPOP42166 694 aaKnown RBP26.69■■□□□ 1.86
E2F1-201ENST00000343380 ITPRIPQ8IWB1 547 aa26.69■■□□□ 1.86
E2F1-201ENST00000343380 ARXQ96QS3 562 aa26.69■■□□□ 1.86
E2F1-201ENST00000343380 GGNBP2Q9H3C7 697 aa26.69■■□□□ 1.86
E2F1-201ENST00000343380 GLI2P10070 1586 aa26.68■■□□□ 1.86
E2F1-201ENST00000343380 NCBP3Q53F19 620 aaKnown RBP26.67■■□□□ 1.86
E2F1-201ENST00000343380 NOB1Q9ULX3 412 aaKnown RBP26.67■■□□□ 1.86
E2F1-201ENST00000343380 HDAC1Q13547 482 aaPredicted RBP26.66■■□□□ 1.86
E2F1-201ENST00000343380 NSD2O96028 1365 aa26.66■■□□□ 1.86
E2F1-201ENST00000343380 FRMPD1Q5SYB0 1578 aa26.66■■□□□ 1.86
E2F1-201ENST00000343380 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
E2F1-201ENST00000343380 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
E2F1-201ENST00000343380 ATF7IPQ6VMQ6 1270 aa26.65■■□□□ 1.86
E2F1-201ENST00000343380 MCM4P33991 863 aa26.64■■□□□ 1.85
E2F1-201ENST00000343380 TMEM57Q8N5G2 664 aa26.64■■□□□ 1.85
E2F1-201ENST00000343380 GZF1Q9H116 711 aaPredicted RBP26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms