RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 COL22A1Q8NFW1 1626 aaPredicted RBP23.56■■□□□ 1.36
SYCE1-202ENST00000343131 STK26Q9P289 416 aa23.56■■□□□ 1.36
SYCE1-202ENST00000343131 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
SYCE1-202ENST00000343131 PLEKHH1Q9ULM0 1364 aa23.55■■□□□ 1.36
SYCE1-202ENST00000343131 LRRC59Q96AG4 307 aaKnown RBP23.55■■□□□ 1.36
SYCE1-202ENST00000343131 RGPD8O14715 1765 aaPredicted RBP23.53■■□□□ 1.36
SYCE1-202ENST00000343131 YTHDC2Q9H6S0 1430 aaKnown RBP23.53■■□□□ 1.36
SYCE1-202ENST00000343131 ZNF772Q68DY9 489 aaPredicted RBP23.53■■□□□ 1.36
SYCE1-202ENST00000343131 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
SYCE1-202ENST00000343131 AFF2P51816 1311 aa23.53■■□□□ 1.36
SYCE1-202ENST00000343131 PXDNQ92626 1479 aa23.52■■□□□ 1.36
SYCE1-202ENST00000343131 MARF1Q9Y4F3 1742 aaKnown RBP23.52■■□□□ 1.36
SYCE1-202ENST00000343131 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
SYCE1-202ENST00000343131 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
SYCE1-202ENST00000343131 SOS2Q07890 1332 aaPredicted RBP23.5■■□□□ 1.35
SYCE1-202ENST00000343131 C8orf37Q96NL8 207 aa23.49■■□□□ 1.35
SYCE1-202ENST00000343131 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
SYCE1-202ENST00000343131 NUTM2FA1L443 756 aa23.47■■□□□ 1.35
SYCE1-202ENST00000343131 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
SYCE1-202ENST00000343131 ACIN1Q9UKV3 1341 aaKnown RBP23.46■■□□□ 1.35
SYCE1-202ENST00000343131 ADAMTS2O95450 1211 aa23.45■■□□□ 1.34
SYCE1-202ENST00000343131 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
SYCE1-202ENST00000343131 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
SYCE1-202ENST00000343131 RGS12O14924 1447 aa23.43■■□□□ 1.34
SYCE1-202ENST00000343131 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
SYCE1-202ENST00000343131 NPHP3Q7Z494 1330 aa23.42■■□□□ 1.34
SYCE1-202ENST00000343131 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
SYCE1-202ENST00000343131 CFAP70Q5T0N1 1121 aa23.42■■□□□ 1.34
SYCE1-202ENST00000343131 RXRBP28702 533 aa23.41■■□□□ 1.34
SYCE1-202ENST00000343131 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
SYCE1-202ENST00000343131 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
SYCE1-202ENST00000343131 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
SYCE1-202ENST00000343131 ABCA3Q99758 1704 aa23.4■■□□□ 1.34
SYCE1-202ENST00000343131 FOXO3O43524 673 aa23.39■■□□□ 1.33
SYCE1-202ENST00000343131 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
SYCE1-202ENST00000343131 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
SYCE1-202ENST00000343131 SAFB2Q14151 953 aaKnown RBP eCLIP23.36■■□□□ 1.33
SYCE1-202ENST00000343131 NGLY1Q96IV0 654 aa23.36■■□□□ 1.33
SYCE1-202ENST00000343131 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
SYCE1-202ENST00000343131 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
SYCE1-202ENST00000343131 QTRT2Q9H974 415 aaKnown RBP23.33■■□□□ 1.33
SYCE1-202ENST00000343131 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
SYCE1-202ENST00000343131 PLCH1Q4KWH8 1693 aa23.31■■□□□ 1.32
SYCE1-202ENST00000343131 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
SYCE1-202ENST00000343131 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
SYCE1-202ENST00000343131 USP21Q9UK80 565 aa23.3■■□□□ 1.32
SYCE1-202ENST00000343131 ATRNO75882 1429 aa23.3■■□□□ 1.32
SYCE1-202ENST00000343131 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
SYCE1-202ENST00000343131 TNS3Q68CZ2 1445 aa23.29■■□□□ 1.32
SYCE1-202ENST00000343131 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
SYCE1-202ENST00000343131 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
SYCE1-202ENST00000343131 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
SYCE1-202ENST00000343131 SPATA31A3Q5VYP0 1347 aa23.27■■□□□ 1.32
SYCE1-202ENST00000343131 EP400Q96L91 3159 aa23.26■■□□□ 1.31
SYCE1-202ENST00000343131 ANKARQ7Z5J8 1434 aa23.26■■□□□ 1.31
SYCE1-202ENST00000343131 ITSN1Q15811 1721 aa23.26■■□□□ 1.31
SYCE1-202ENST00000343131 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
SYCE1-202ENST00000343131 POGKQ9P215 609 aa23.26■■□□□ 1.31
SYCE1-202ENST00000343131 TULP4Q9NRJ4 1543 aa23.25■■□□□ 1.31
SYCE1-202ENST00000343131 PHF8Q9UPP1 1060 aa23.25■■□□□ 1.31
SYCE1-202ENST00000343131 TRAK1Q9UPV9 953 aa23.25■■□□□ 1.31
SYCE1-202ENST00000343131 ALS2Q96Q42 1657 aa23.25■■□□□ 1.31
SYCE1-202ENST00000343131 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
SYCE1-202ENST00000343131 GLI3P10071 1580 aa23.23■■□□□ 1.31
SYCE1-202ENST00000343131 KIAA1210Q9ULL0 1709 aa23.23■■□□□ 1.31
SYCE1-202ENST00000343131 KRT28Q7Z3Y7 464 aa23.23■■□□□ 1.31
SYCE1-202ENST00000343131 TRPC5Q9UL62 973 aaPredicted RBP23.23■■□□□ 1.31
SYCE1-202ENST00000343131 NWD2Q9ULI1 1742 aa23.22■■□□□ 1.31
SYCE1-202ENST00000343131 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
SYCE1-202ENST00000343131 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
SYCE1-202ENST00000343131 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
SYCE1-202ENST00000343131 SLIT2O94813 1529 aa23.21■■□□□ 1.31
SYCE1-202ENST00000343131 HRCP23327 699 aa23.2■■□□□ 1.3
SYCE1-202ENST00000343131 BRWD3Q6RI45 1802 aa23.19■■□□□ 1.3
SYCE1-202ENST00000343131 TOPAZ1Q8N9V7 1692 aa23.19■■□□□ 1.3
SYCE1-202ENST00000343131 SBNO1A3KN83 1393 aa23.18■■□□□ 1.3
SYCE1-202ENST00000343131 PRR36Q9H6K5 1346 aa23.18■■□□□ 1.3
SYCE1-202ENST00000343131 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
SYCE1-202ENST00000343131 NRAPQ86VF7 1730 aa23.18■■□□□ 1.3
SYCE1-202ENST00000343131 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
SYCE1-202ENST00000343131 ATP7BP35670 1465 aa23.17■■□□□ 1.3
SYCE1-202ENST00000343131 ATAD2Q6PL18 1390 aa23.16■■□□□ 1.3
SYCE1-202ENST00000343131 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
SYCE1-202ENST00000343131 ARHGEF10O15013 1369 aa23.15■■□□□ 1.3
SYCE1-202ENST00000343131 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
SYCE1-202ENST00000343131 LMOD2Q6P5Q4 547 aa23.15■■□□□ 1.3
SYCE1-202ENST00000343131 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.29
SYCE1-202ENST00000343131 PSME1Q06323 249 aa23.14■■□□□ 1.29
SYCE1-202ENST00000343131 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
SYCE1-202ENST00000343131 WASLO00401 505 aaPredicted RBP23.11■■□□□ 1.29
SYCE1-202ENST00000343131 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
SYCE1-202ENST00000343131 COL14A1Q05707 1796 aaKnown RBP23.1■■□□□ 1.29
SYCE1-202ENST00000343131 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
SYCE1-202ENST00000343131 GJD4Q96KN9 370 aaPredicted RBP23.1■■□□□ 1.29
SYCE1-202ENST00000343131 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
SYCE1-202ENST00000343131 GPRASP1Q5JY77 1395 aa23.08■■□□□ 1.29
SYCE1-202ENST00000343131 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
SYCE1-202ENST00000343131 NGDNQ8NEJ9 315 aaKnown RBP23.02■■□□□ 1.28
SYCE1-202ENST00000343131 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
SYCE1-202ENST00000343131 NUDT16Q96DE0 195 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms