RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
SDHC-201ENST00000342751 KNDC1Q76NI1 1749 aa29.86■■■□□ 2.37
SDHC-201ENST00000342751 ZNF772Q68DY9 489 aaPredicted RBP29.86■■■□□ 2.37
SDHC-201ENST00000342751 TECPR2O15040 1411 aa29.86■■■□□ 2.37
SDHC-201ENST00000342751 YTHDC2Q9H6S0 1430 aaKnown RBP29.86■■■□□ 2.37
SDHC-201ENST00000342751 MYOM2P54296 1465 aa29.85■■■□□ 2.37
SDHC-201ENST00000342751 CFAP70Q5T0N1 1121 aa29.84■■■□□ 2.37
SDHC-201ENST00000342751 PNPLA6Q8IY17 1366 aa29.84■■■□□ 2.37
SDHC-201ENST00000342751 ABCC11Q96J66 1382 aa29.83■■■□□ 2.37
SDHC-201ENST00000342751 ESCO1Q5FWF5 840 aa29.83■■■□□ 2.37
SDHC-201ENST00000342751 NRXN1Q9ULB1 1477 aa29.8■■■□□ 2.36
SDHC-201ENST00000342751 C14orf93Q9H972 538 aaKnown RBP29.8■■■□□ 2.36
SDHC-201ENST00000342751 LAMC1P11047 1609 aa29.8■■■□□ 2.36
SDHC-201ENST00000342751 KDM2AQ9Y2K7 1162 aa29.79■■■□□ 2.36
SDHC-201ENST00000342751 SAFB2Q14151 953 aaKnown RBP eCLIP29.77■■■□□ 2.36
SDHC-201ENST00000342751 C8orf37Q96NL8 207 aa29.77■■■□□ 2.36
SDHC-201ENST00000342751 DHX57Q6P158 1386 aaKnown RBP29.77■■■□□ 2.36
SDHC-201ENST00000342751 AFF2P51816 1311 aa29.76■■■□□ 2.36
SDHC-201ENST00000342751 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
SDHC-201ENST00000342751 SOS2Q07890 1332 aaPredicted RBP29.75■■■□□ 2.35
SDHC-201ENST00000342751 ADAMTS2O95450 1211 aa29.75■■■□□ 2.35
SDHC-201ENST00000342751 DCAF11Q8TEB1 546 aa29.73■■■□□ 2.35
SDHC-201ENST00000342751 FMN2Q9NZ56 1722 aa29.72■■■□□ 2.35
SDHC-201ENST00000342751 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
SDHC-201ENST00000342751 FOXO3O43524 673 aa29.71■■■□□ 2.35
SDHC-201ENST00000342751 PRAM1Q96QH2 718 aa29.71■■■□□ 2.35
SDHC-201ENST00000342751 HRCP23327 699 aa29.7■■■□□ 2.35
SDHC-201ENST00000342751 RXRBP28702 533 aa29.7■■■□□ 2.35
SDHC-201ENST00000342751 POGKQ9P215 609 aa29.68■■■□□ 2.34
SDHC-201ENST00000342751 PXDNQ92626 1479 aa29.67■■■□□ 2.34
SDHC-201ENST00000342751 SIRT1Q96EB6 747 aa29.65■■■□□ 2.34
SDHC-201ENST00000342751 NGLY1Q96IV0 654 aa29.65■■■□□ 2.34
SDHC-201ENST00000342751 TRAK1Q9UPV9 953 aa29.65■■■□□ 2.34
SDHC-201ENST00000342751 ADGRB1O14514 1584 aa29.63■■■□□ 2.33
SDHC-201ENST00000342751 CDK12Q9NYV4 1490 aaPredicted RBP29.62■■■□□ 2.33
SDHC-201ENST00000342751 KIF1AQ12756 1690 aa29.62■■■□□ 2.33
SDHC-201ENST00000342751 DLC1Q96QB1 1528 aa29.61■■■□□ 2.33
SDHC-201ENST00000342751 COL22A1Q8NFW1 1626 aaPredicted RBP29.61■■■□□ 2.33
SDHC-201ENST00000342751 RGPD8O14715 1765 aaPredicted RBP29.61■■■□□ 2.33
SDHC-201ENST00000342751 HIRIP3Q9BW71 556 aaPredicted RBP29.59■■■□□ 2.33
SDHC-201ENST00000342751 QTRT2Q9H974 415 aaKnown RBP29.59■■■□□ 2.33
SDHC-201ENST00000342751 MINK1Q8N4C8 1332 aaPredicted RBP29.57■■■□□ 2.32
SDHC-201ENST00000342751 PLEKHG5O94827 1062 aa29.57■■■□□ 2.32
SDHC-201ENST00000342751 PHF8Q9UPP1 1060 aa29.57■■■□□ 2.32
SDHC-201ENST00000342751 KRT28Q7Z3Y7 464 aa29.55■■■□□ 2.32
SDHC-201ENST00000342751 UPF1Q92900 1129 aaKnown RBP eCLIP29.55■■■□□ 2.328e-26■■■■■ 105.7
SDHC-201ENST00000342751 RBM6P78332 1123 aaKnown RBP29.54■■■□□ 2.32
SDHC-201ENST00000342751 USP21Q9UK80 565 aa29.53■■■□□ 2.32
SDHC-201ENST00000342751 RGS12O14924 1447 aa29.53■■■□□ 2.32
SDHC-201ENST00000342751 PMFBP1Q8TBY8 1022 aa29.51■■■□□ 2.31
SDHC-201ENST00000342751 ADGRB2O60241 1585 aa29.51■■■□□ 2.31
SDHC-201ENST00000342751 SPATA31A3Q5VYP0 1347 aa29.5■■■□□ 2.31
SDHC-201ENST00000342751 STAC3Q96MF2 364 aa29.5■■■□□ 2.31
SDHC-201ENST00000342751 USP32Q8NFA0 1604 aa29.49■■■□□ 2.31
SDHC-201ENST00000342751 LMOD2Q6P5Q4 547 aa29.49■■■□□ 2.31
SDHC-201ENST00000342751 MARF1Q9Y4F3 1742 aaKnown RBP29.48■■■□□ 2.31
SDHC-201ENST00000342751 HAP1P54257 671 aaPredicted RBP29.47■■■□□ 2.31
SDHC-201ENST00000342751 TNS3Q68CZ2 1445 aa29.46■■■□□ 2.31
SDHC-201ENST00000342751 ANKARQ7Z5J8 1434 aa29.46■■■□□ 2.31
SDHC-201ENST00000342751 PSME1Q06323 249 aa29.46■■■□□ 2.31
SDHC-201ENST00000342751 FNBP4Q8N3X1 1017 aaPredicted RBP29.46■■■□□ 2.31
SDHC-201ENST00000342751 ARHGEF28Q8N1W1 1705 aaKnown RBP29.45■■■□□ 2.31
SDHC-201ENST00000342751 TRPC5Q9UL62 973 aaPredicted RBP29.44■■■□□ 2.3
SDHC-201ENST00000342751 CABLES1Q8TDN4 633 aa29.42■■■□□ 2.3
SDHC-201ENST00000342751 PRR36Q9H6K5 1346 aa29.42■■■□□ 2.3
SDHC-201ENST00000342751 EIF3AQ14152 1382 aaKnown RBP29.41■■■□□ 2.3
SDHC-201ENST00000342751 TULP4Q9NRJ4 1543 aa29.41■■■□□ 2.3
SDHC-201ENST00000342751 WASLO00401 505 aaPredicted RBP29.41■■■□□ 2.3
SDHC-201ENST00000342751 ATRNO75882 1429 aa29.41■■■□□ 2.3
SDHC-201ENST00000342751 SBNO1A3KN83 1393 aa29.38■■■□□ 2.29
SDHC-201ENST00000342751 BCL9LQ86UU0 1499 aa29.36■■■□□ 2.29
SDHC-201ENST00000342751 NBPF1Q3BBV0 1214 aa29.36■■■□□ 2.29
SDHC-201ENST00000342751 KIAA1210Q9ULL0 1709 aa29.35■■■□□ 2.29
SDHC-201ENST00000342751 ARHGEF10O15013 1369 aa29.35■■■□□ 2.29
SDHC-201ENST00000342751 GPRASP1Q5JY77 1395 aa29.35■■■□□ 2.29
SDHC-201ENST00000342751 NGDNQ8NEJ9 315 aaKnown RBP29.34■■■□□ 2.29
SDHC-201ENST00000342751 ABCA3Q99758 1704 aa29.33■■■□□ 2.29
SDHC-201ENST00000342751 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
SDHC-201ENST00000342751 SIN3AQ96ST3 1273 aa29.32■■■□□ 2.28
SDHC-201ENST00000342751 TRPM3Q9HCF6 1732 aaPredicted RBP29.31■■■□□ 2.28
SDHC-201ENST00000342751 NEUROD1Q13562 356 aa29.31■■■□□ 2.28
SDHC-201ENST00000342751 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
SDHC-201ENST00000342751 ATP7BP35670 1465 aa29.29■■■□□ 2.28
SDHC-201ENST00000342751 ATAD2Q6PL18 1390 aa29.29■■■□□ 2.28
SDHC-201ENST00000342751 UNC5CLQ8IV45 518 aa29.29■■■□□ 2.28
SDHC-201ENST00000342751 NUDT16Q96DE0 195 aaKnown RBP29.29■■■□□ 2.28
SDHC-201ENST00000342751 CDK19Q9BWU1 502 aa29.29■■■□□ 2.28
SDHC-201ENST00000342751 ITSN1Q15811 1721 aa29.28■■■□□ 2.28
SDHC-201ENST00000342751 L3MBTL2Q969R5 705 aa29.28■■■□□ 2.28
SDHC-201ENST00000342751 SLIT2O94813 1529 aa29.28■■■□□ 2.28
SDHC-201ENST00000342751 GJD4Q96KN9 370 aaPredicted RBP29.27■■■□□ 2.28
SDHC-201ENST00000342751 PLCH1Q4KWH8 1693 aa29.26■■■□□ 2.27
SDHC-201ENST00000342751 ALS2Q96Q42 1657 aa29.25■■■□□ 2.27
SDHC-201ENST00000342751 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
SDHC-201ENST00000342751 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
SDHC-201ENST00000342751 GLI3P10071 1580 aa29.21■■■□□ 2.27
SDHC-201ENST00000342751 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.27
SDHC-201ENST00000342751 TOPAZ1Q8N9V7 1692 aa29.19■■■□□ 2.26
SDHC-201ENST00000342751 SRPK2P78362 688 aaKnown RBP29.19■■■□□ 2.26
SDHC-201ENST00000342751 QRICH2Q9H0J4 1663 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms