RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 ALKQ9UM73 1620 aa25.92■■□□□ 1.74
NHLRC1-201ENST00000340650 PDE3BQ13370 1112 aa25.92■■□□□ 1.74
NHLRC1-201ENST00000340650 FER1L4A9Z1Z3 1794 aa25.92■■□□□ 1.74
NHLRC1-201ENST00000340650 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
NHLRC1-201ENST00000340650 RCAN3Q9UKA8 241 aa25.91■■□□□ 1.74
NHLRC1-201ENST00000340650 ARHGEF28Q8N1W1 1705 aaKnown RBP25.91■■□□□ 1.74
NHLRC1-201ENST00000340650 MYOM1P52179 1685 aa25.9■■□□□ 1.74
NHLRC1-201ENST00000340650 PARD3Q8TEW0 1356 aa25.89■■□□□ 1.74
NHLRC1-201ENST00000340650 C3P01024 1663 aa25.89■■□□□ 1.73
NHLRC1-201ENST00000340650 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
NHLRC1-201ENST00000340650 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
NHLRC1-201ENST00000340650 MS4A1P11836 297 aa25.87■■□□□ 1.73
NHLRC1-201ENST00000340650 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.87■■□□□ 1.73
NHLRC1-201ENST00000340650 KNSTRNQ9Y448 316 aa25.87■■□□□ 1.73
NHLRC1-201ENST00000340650 UBR1Q8IWV7 1749 aa25.86■■□□□ 1.73
NHLRC1-201ENST00000340650 PTPRMP28827 1452 aa25.85■■□□□ 1.73
NHLRC1-201ENST00000340650 TMEM2Q9UHN6 1383 aa25.85■■□□□ 1.73
NHLRC1-201ENST00000340650 PRAM1Q96QH2 718 aa25.84■■□□□ 1.73
NHLRC1-201ENST00000340650 INSRP06213 1382 aa25.84■■□□□ 1.73
NHLRC1-201ENST00000340650 PDE4AP27815 886 aa25.83■■□□□ 1.73
NHLRC1-201ENST00000340650 NLRP1Q9C000 1473 aa25.83■■□□□ 1.72
NHLRC1-201ENST00000340650 POGKQ9P215 609 aa25.82■■□□□ 1.72
NHLRC1-201ENST00000340650 BACH2Q9BYV9 841 aa25.82■■□□□ 1.72
NHLRC1-201ENST00000340650 HDGFP51858 240 aaKnown RBP25.81■■□□□ 1.72
NHLRC1-201ENST00000340650 EVC2Q86UK5 1308 aa25.81■■□□□ 1.72
NHLRC1-201ENST00000340650 TULP4Q9NRJ4 1543 aa25.8■■□□□ 1.72
NHLRC1-201ENST00000340650 NRXN3Q9Y4C0 1643 aa25.8■■□□□ 1.72
NHLRC1-201ENST00000340650 AMER1Q5JTC6 1135 aaPredicted RBP25.8■■□□□ 1.72
NHLRC1-201ENST00000340650 MINK1Q8N4C8 1332 aaPredicted RBP25.8■■□□□ 1.72
NHLRC1-201ENST00000340650 SLC12A5Q9H2X9 1139 aa25.78■■□□□ 1.72
NHLRC1-201ENST00000340650 CABP2Q9NPB3 220 aa25.78■■□□□ 1.72
NHLRC1-201ENST00000340650 METP08581 1390 aa25.78■■□□□ 1.72
NHLRC1-201ENST00000340650 LTKP29376 864 aa25.78■■□□□ 1.72
NHLRC1-201ENST00000340650 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
NHLRC1-201ENST00000340650 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
NHLRC1-201ENST00000340650 BLMP54132 1417 aaPredicted RBP25.76■■□□□ 1.71
NHLRC1-201ENST00000340650 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
NHLRC1-201ENST00000340650 WAPLQ7Z5K2 1190 aa25.75■■□□□ 1.71
NHLRC1-201ENST00000340650 NPM2Q86SE8 214 aaKnown RBP25.75■■□□□ 1.71
NHLRC1-201ENST00000340650 TXNDC2Q86VQ3 553 aa25.73■■□□□ 1.71
NHLRC1-201ENST00000340650 SRPK2P78362 688 aaKnown RBP25.73■■□□□ 1.71
NHLRC1-201ENST00000340650 RIMS1Q86UR5 1692 aaKnown RBP25.73■■□□□ 1.71
NHLRC1-201ENST00000340650 PLEKHH1Q9ULM0 1364 aa25.72■■□□□ 1.71
NHLRC1-201ENST00000340650 SALL2Q9Y467 1007 aaPredicted RBP25.7■■□□□ 1.7
NHLRC1-201ENST00000340650 CDCA7LQ96GN5 454 aa25.69■■□□□ 1.7
NHLRC1-201ENST00000340650 ABCC11Q96J66 1382 aa25.69■■□□□ 1.7
NHLRC1-201ENST00000340650 EID1Q9Y6B2 187 aa25.69■■□□□ 1.7
NHLRC1-201ENST00000340650 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
NHLRC1-201ENST00000340650 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
NHLRC1-201ENST00000340650 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
NHLRC1-201ENST00000340650 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
NHLRC1-201ENST00000340650 PLEKHG1Q9ULL1 1385 aa25.66■■□□□ 1.7
NHLRC1-201ENST00000340650 PPM1GO15355 546 aaPredicted RBP25.66■■□□□ 1.7
NHLRC1-201ENST00000340650 THEMISQ8N1K5 641 aaPredicted RBP25.66■■□□□ 1.7
NHLRC1-201ENST00000340650 SLC26A8Q96RN1 970 aa25.66■■□□□ 1.7
NHLRC1-201ENST00000340650 PPP2R1AP30153 589 aa25.65■■□□□ 1.7
NHLRC1-201ENST00000340650 NPC1L1Q9UHC9 1359 aa25.65■■□□□ 1.7
NHLRC1-201ENST00000340650 CDK19Q9BWU1 502 aa25.64■■□□□ 1.7
NHLRC1-201ENST00000340650 NEFMP07197 916 aa25.64■■□□□ 1.69
NHLRC1-201ENST00000340650 SLIT1O75093 1534 aa25.64■■□□□ 1.69
NHLRC1-201ENST00000340650 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
NHLRC1-201ENST00000340650 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
NHLRC1-201ENST00000340650 ADAMTSL3P82987 1691 aa25.62■■□□□ 1.69
NHLRC1-201ENST00000340650 CRBNQ96SW2 442 aa25.62■■□□□ 1.69
NHLRC1-201ENST00000340650 DDRGK1Q96HY6 314 aa25.61■■□□□ 1.69
NHLRC1-201ENST00000340650 ANKRD36BQ8N2N9 1353 aa25.6■■□□□ 1.69
NHLRC1-201ENST00000340650 PLIN1O60240 522 aa25.6■■□□□ 1.69
NHLRC1-201ENST00000340650 ATAD2Q6PL18 1390 aa25.6■■□□□ 1.69
NHLRC1-201ENST00000340650 CEP170BQ9Y4F5 1589 aaPredicted RBP25.59■■□□□ 1.69
NHLRC1-201ENST00000340650 TECPR2O15040 1411 aa25.57■■□□□ 1.68
NHLRC1-201ENST00000340650 A0A1W2PP64 1363 aa25.57■■□□□ 1.68
NHLRC1-201ENST00000340650 ROBO2Q9HCK4 1378 aa25.56■■□□□ 1.68
NHLRC1-201ENST00000340650 KDM2BQ8NHM5 1336 aa25.55■■□□□ 1.68
NHLRC1-201ENST00000340650 TNNT2P45379 298 aaPredicted RBP25.55■■□□□ 1.68
NHLRC1-201ENST00000340650 MED14O60244 1454 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 NINLQ9Y2I6 1382 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 CGNL1Q0VF96 1302 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 CABP1Q9NZU7 370 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 CPS1P31327 1500 aa25.54■■□□□ 1.68
NHLRC1-201ENST00000340650 MORC1Q86VD1 984 aa25.53■■□□□ 1.68
NHLRC1-201ENST00000340650 PTPRUQ92729 1446 aa25.53■■□□□ 1.68
NHLRC1-201ENST00000340650 WASLO00401 505 aaPredicted RBP25.52■■□□□ 1.68
NHLRC1-201ENST00000340650 SIRT1Q96EB6 747 aa25.51■■□□□ 1.67
NHLRC1-201ENST00000340650 TERF2IPQ9NYB0 399 aa25.51■■□□□ 1.67
NHLRC1-201ENST00000340650 CD163L1Q9NR16 1453 aa25.5■■□□□ 1.67
NHLRC1-201ENST00000340650 IL27Q8NEV9 243 aa25.49■■□□□ 1.67
NHLRC1-201ENST00000340650 TBX22Q9Y458 520 aa25.49■■□□□ 1.67
NHLRC1-201ENST00000340650 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
NHLRC1-201ENST00000340650 USP32Q8NFA0 1604 aa25.48■■□□□ 1.67
NHLRC1-201ENST00000340650 C20orf194Q5TEA3 1177 aa25.47■■□□□ 1.67
NHLRC1-201ENST00000340650 CENPQQ7L2Z9 268 aaPredicted RBP25.47■■□□□ 1.67
NHLRC1-201ENST00000340650 SKAP1Q86WV1 359 aa25.47■■□□□ 1.67
NHLRC1-201ENST00000340650 ADAMTS8Q9UP79 889 aa25.47■■□□□ 1.67
NHLRC1-201ENST00000340650 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
NHLRC1-201ENST00000340650 NCKAP5LQ9HCH0 1330 aa25.46■■□□□ 1.67
NHLRC1-201ENST00000340650 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
NHLRC1-201ENST00000340650 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
NHLRC1-201ENST00000340650 NUDT16Q96DE0 195 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms