RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 MYOM2P54296 1465 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 DMRT2Q9Y5R5 561 aa13.34□□□□□ -0.27
RBFOX1-202ENST00000340209 ZMYM3Q14202 1370 aa13.33□□□□□ -0.28
RBFOX1-202ENST00000340209 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
RBFOX1-202ENST00000340209 ERICH6Q7L0X2 663 aa13.33□□□□□ -0.28
RBFOX1-202ENST00000340209 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-202ENST00000340209 SYNMO15061 1565 aa13.33□□□□□ -0.28
RBFOX1-202ENST00000340209 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
RBFOX1-202ENST00000340209 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
RBFOX1-202ENST00000340209 RICTORQ6R327 1708 aa13.32□□□□□ -0.28
RBFOX1-202ENST00000340209 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
RBFOX1-202ENST00000340209 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-202ENST00000340209 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
RBFOX1-202ENST00000340209 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
RBFOX1-202ENST00000340209 HMOX1P09601 288 aa13.31□□□□□ -0.28
RBFOX1-202ENST00000340209 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
RBFOX1-202ENST00000340209 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
RBFOX1-202ENST00000340209 BCAR3O75815 825 aa13.3□□□□□ -0.28
RBFOX1-202ENST00000340209 PMFBP1Q8TBY8 1022 aa13.3□□□□□ -0.28
RBFOX1-202ENST00000340209 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-202ENST00000340209 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
RBFOX1-202ENST00000340209 A0A1W2PP64 1363 aa13.29□□□□□ -0.28
RBFOX1-202ENST00000340209 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
RBFOX1-202ENST00000340209 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
RBFOX1-202ENST00000340209 NME9Q86XW9 330 aa13.28□□□□□ -0.28
RBFOX1-202ENST00000340209 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-202ENST00000340209 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
RBFOX1-202ENST00000340209 LAMC1P11047 1609 aa13.27□□□□□ -0.28
RBFOX1-202ENST00000340209 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-202ENST00000340209 TNRQ92752 1358 aa13.27□□□□□ -0.29
RBFOX1-202ENST00000340209 MYO5BQ9ULV0 1848 aa13.27□□□□□ -0.29
RBFOX1-202ENST00000340209 GLI2P10070 1586 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 TSR2Q969E8 191 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 NEFMP07197 916 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 RGS3P49796 1198 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 FYB1O15117 783 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 METP08581 1390 aa13.26□□□□□ -0.29
RBFOX1-202ENST00000340209 LTKP29376 864 aa13.25□□□□□ -0.29
RBFOX1-202ENST00000340209 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
RBFOX1-202ENST00000340209 EMILIN1Q9Y6C2 1016 aa13.25□□□□□ -0.29
RBFOX1-202ENST00000340209 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-202ENST00000340209 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 PPLO60437 1756 aa13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
RBFOX1-202ENST00000340209 ANKRD36BQ8N2N9 1353 aa13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 ADGRB1O14514 1584 aa13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-202ENST00000340209 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 PREX1Q8TCU6 1659 aa13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 WASLO00401 505 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 DIAPH1O60610 1272 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 NGDNQ8NEJ9 315 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-202ENST00000340209 NRXN1Q9ULB1 1477 aa13.21□□□□□ -0.29
RBFOX1-202ENST00000340209 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
RBFOX1-202ENST00000340209 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.29
RBFOX1-202ENST00000340209 TULP4Q9NRJ4 1543 aa13.21□□□□□ -0.29
RBFOX1-202ENST00000340209 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 E9PSI1 815 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 COG3Q96JB2 828 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 RIPK4P57078 832 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
RBFOX1-202ENST00000340209 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
RBFOX1-202ENST00000340209 MYOM1P52179 1685 aa13.19□□□□□ -0.3
RBFOX1-202ENST00000340209 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
RBFOX1-202ENST00000340209 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
RBFOX1-202ENST00000340209 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
RBFOX1-202ENST00000340209 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
RBFOX1-202ENST00000340209 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
RBFOX1-202ENST00000340209 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
RBFOX1-202ENST00000340209 TMEM131LA2VDJ0 1609 aa13.16□□□□□ -0.3
RBFOX1-202ENST00000340209 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
RBFOX1-202ENST00000340209 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
RBFOX1-202ENST00000340209 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-202ENST00000340209 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
RBFOX1-202ENST00000340209 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
RBFOX1-202ENST00000340209 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
RBFOX1-202ENST00000340209 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
RBFOX1-202ENST00000340209 PTPRMP28827 1452 aa13.14□□□□□ -0.31
RBFOX1-202ENST00000340209 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms