RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
MBD1-203ENST00000339998 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
MBD1-203ENST00000339998 SPATA31D1Q6ZQQ2 1576 aa20.62■□□□□ 0.89
MBD1-203ENST00000339998 PLEKHH1Q9ULM0 1364 aa20.61■□□□□ 0.89
MBD1-203ENST00000339998 PTPRMP28827 1452 aa20.6■□□□□ 0.89
MBD1-203ENST00000339998 BLMP54132 1417 aaPredicted RBP20.59■□□□□ 0.89
MBD1-203ENST00000339998 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.89
MBD1-203ENST00000339998 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
MBD1-203ENST00000339998 CDK19Q9BWU1 502 aa20.57■□□□□ 0.88
MBD1-203ENST00000339998 GGNBP2Q9H3C7 697 aa20.56■□□□□ 0.88
MBD1-203ENST00000339998 METP08581 1390 aa20.56■□□□□ 0.88
MBD1-203ENST00000339998 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
MBD1-203ENST00000339998 APAF1O14727 1248 aa20.55■□□□□ 0.88
MBD1-203ENST00000339998 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
MBD1-203ENST00000339998 TNRQ92752 1358 aa20.55■□□□□ 0.88
MBD1-203ENST00000339998 NCKAP5LQ9HCH0 1330 aa20.54■□□□□ 0.88
MBD1-203ENST00000339998 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
MBD1-203ENST00000339998 PLIN1O60240 522 aa20.54■□□□□ 0.88
MBD1-203ENST00000339998 MTHFSP49914 203 aa20.54■□□□□ 0.88
MBD1-203ENST00000339998 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
MBD1-203ENST00000339998 FBLN1P23142 703 aa20.53■□□□□ 0.88
MBD1-203ENST00000339998 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
MBD1-203ENST00000339998 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
MBD1-203ENST00000339998 LTKP29376 864 aa20.52■□□□□ 0.87
MBD1-203ENST00000339998 ANKRD36BQ8N2N9 1353 aa20.51■□□□□ 0.87
MBD1-203ENST00000339998 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
MBD1-203ENST00000339998 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
MBD1-203ENST00000339998 RNF123Q5XPI4 1314 aa20.5■□□□□ 0.87
MBD1-203ENST00000339998 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
MBD1-203ENST00000339998 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
MBD1-203ENST00000339998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
MBD1-203ENST00000339998 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
MBD1-203ENST00000339998 NUTM2FA1L443 756 aa20.49■□□□□ 0.87
MBD1-203ENST00000339998 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
MBD1-203ENST00000339998 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
MBD1-203ENST00000339998 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
MBD1-203ENST00000339998 FYB1O15117 783 aa20.46■□□□□ 0.87
MBD1-203ENST00000339998 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
MBD1-203ENST00000339998 TMEM2Q9UHN6 1383 aa20.45■□□□□ 0.86
MBD1-203ENST00000339998 CD163L1Q9NR16 1453 aa20.45■□□□□ 0.86
MBD1-203ENST00000339998 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
MBD1-203ENST00000339998 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD1-203ENST00000339998 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
MBD1-203ENST00000339998 DUSP27Q5VZP5 1158 aa20.43■□□□□ 0.86
MBD1-203ENST00000339998 ZNF521Q96K83 1311 aa20.42■□□□□ 0.86
MBD1-203ENST00000339998 TERF2IPQ9NYB0 399 aa20.42■□□□□ 0.86
MBD1-203ENST00000339998 POLR3AO14802 1390 aaPredicted RBP20.42■□□□□ 0.86
MBD1-203ENST00000339998 ATAD2Q6PL18 1390 aa20.42■□□□□ 0.86
MBD1-203ENST00000339998 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
MBD1-203ENST00000339998 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
MBD1-203ENST00000339998 ZRANB1Q9UGI0 708 aa20.41■□□□□ 0.86
MBD1-203ENST00000339998 ABCC11Q96J66 1382 aa20.41■□□□□ 0.86
MBD1-203ENST00000339998 UBR1Q8IWV7 1749 aa20.4■□□□□ 0.86
MBD1-203ENST00000339998 C20orf194Q5TEA3 1177 aa20.4■□□□□ 0.86
MBD1-203ENST00000339998 INSRP06213 1382 aa20.39■□□□□ 0.86
MBD1-203ENST00000339998 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
MBD1-203ENST00000339998 CCDC136Q96JN2 1154 aa20.39■□□□□ 0.85
MBD1-203ENST00000339998 WASLO00401 505 aaPredicted RBP20.39■□□□□ 0.85
MBD1-203ENST00000339998 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.85
MBD1-203ENST00000339998 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
MBD1-203ENST00000339998 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
MBD1-203ENST00000339998 ROBO2Q9HCK4 1378 aa20.38■□□□□ 0.85
MBD1-203ENST00000339998 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
MBD1-203ENST00000339998 SHPRHQ149N8 1683 aa20.36■□□□□ 0.85
MBD1-203ENST00000339998 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
MBD1-203ENST00000339998 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
MBD1-203ENST00000339998 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
MBD1-203ENST00000339998 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
MBD1-203ENST00000339998 NUDT16Q96DE0 195 aaKnown RBP20.36■□□□□ 0.85
MBD1-203ENST00000339998 C3P01024 1663 aa20.34■□□□□ 0.85
MBD1-203ENST00000339998 NME9Q86XW9 330 aa20.34■□□□□ 0.85
MBD1-203ENST00000339998 CFAP53Q96M91 514 aa20.34■□□□□ 0.85
MBD1-203ENST00000339998 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
MBD1-203ENST00000339998 PRR36Q9H6K5 1346 aa20.33■□□□□ 0.85
MBD1-203ENST00000339998 USP32Q8NFA0 1604 aa20.33■□□□□ 0.85
MBD1-203ENST00000339998 NLRP1Q9C000 1473 aa20.33■□□□□ 0.84
MBD1-203ENST00000339998 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.84
MBD1-203ENST00000339998 PPIP5K1Q6PFW1 1433 aa20.32■□□□□ 0.84
MBD1-203ENST00000339998 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
MBD1-203ENST00000339998 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
MBD1-203ENST00000339998 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
MBD1-203ENST00000339998 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
MBD1-203ENST00000339998 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
MBD1-203ENST00000339998 BCAR3O75815 825 aa20.3■□□□□ 0.84
MBD1-203ENST00000339998 NSD2O96028 1365 aa20.3■□□□□ 0.84
MBD1-203ENST00000339998 PTPRUQ92729 1446 aa20.3■□□□□ 0.84
MBD1-203ENST00000339998 FER1L4A9Z1Z3 1794 aa20.3■□□□□ 0.84
MBD1-203ENST00000339998 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
MBD1-203ENST00000339998 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
MBD1-203ENST00000339998 SKAP1Q86WV1 359 aa20.28■□□□□ 0.84
MBD1-203ENST00000339998 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
MBD1-203ENST00000339998 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
MBD1-203ENST00000339998 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
MBD1-203ENST00000339998 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
MBD1-203ENST00000339998 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
MBD1-203ENST00000339998 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
MBD1-203ENST00000339998 SOX12O15370 315 aa20.25■□□□□ 0.83
MBD1-203ENST00000339998 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
MBD1-203ENST00000339998 E9PSI1 815 aa20.24■□□□□ 0.83
MBD1-203ENST00000339998 THEMISQ8N1K5 641 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms