RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 SLIT2O94813 1529 aa14.1□□□□□ -0.15
TBCCD1-201ENST00000338733 GLI3P10071 1580 aa14.1□□□□□ -0.15
TBCCD1-201ENST00000338733 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
TBCCD1-201ENST00000338733 PRAG1Q86YV5 1406 aa14.08□□□□□ -0.15
TBCCD1-201ENST00000338733 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.15
TBCCD1-201ENST00000338733 NALCNQ8IZF0 1738 aa14.08□□□□□ -0.16
TBCCD1-201ENST00000338733 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
TBCCD1-201ENST00000338733 IQGAP3Q86VI3 1631 aa14.07□□□□□ -0.16
TBCCD1-201ENST00000338733 NPHP3Q7Z494 1330 aa14.07□□□□□ -0.16
TBCCD1-201ENST00000338733 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
TBCCD1-201ENST00000338733 PSDA5PKW4 1024 aaPredicted RBP14.05□□□□□ -0.16
TBCCD1-201ENST00000338733 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
TBCCD1-201ENST00000338733 METP08581 1390 aa14.05□□□□□ -0.16
TBCCD1-201ENST00000338733 MYT1Q01538 1121 aa14.04□□□□□ -0.16
TBCCD1-201ENST00000338733 VPS72Q15906 364 aa14.04□□□□□ -0.16
TBCCD1-201ENST00000338733 KRT27Q7Z3Y8 459 aa14.04□□□□□ -0.16
TBCCD1-201ENST00000338733 LRPPRCP42704 1394 aaKnown RBP14.04□□□□□ -0.16
TBCCD1-201ENST00000338733 PXDNQ92626 1479 aa14.03□□□□□ -0.16
TBCCD1-201ENST00000338733 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
TBCCD1-201ENST00000338733 ORAI2Q96SN7 254 aa14.03□□□□□ -0.16
TBCCD1-201ENST00000338733 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
TBCCD1-201ENST00000338733 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.17
TBCCD1-201ENST00000338733 EP400Q96L91 3159 aa14.02□□□□□ -0.17
TBCCD1-201ENST00000338733 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
TBCCD1-201ENST00000338733 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
TBCCD1-201ENST00000338733 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
TBCCD1-201ENST00000338733 HFM1A2PYH4 1435 aa14□□□□□ -0.17
TBCCD1-201ENST00000338733 E9PCH4 1651 aa13.98□□□□□ -0.17
TBCCD1-201ENST00000338733 PARD3Q8TEW0 1356 aa13.98□□□□□ -0.17
TBCCD1-201ENST00000338733 RGPD1P0DJD0 1748 aa13.98□□□□□ -0.17
TBCCD1-201ENST00000338733 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
TBCCD1-201ENST00000338733 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
TBCCD1-201ENST00000338733 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
TBCCD1-201ENST00000338733 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
TBCCD1-201ENST00000338733 NWD2Q9ULI1 1742 aa13.96□□□□□ -0.17
TBCCD1-201ENST00000338733 CDC42BPGQ6DT37 1551 aa13.96□□□□□ -0.17
TBCCD1-201ENST00000338733 USP32Q8NFA0 1604 aa13.96□□□□□ -0.18
TBCCD1-201ENST00000338733 ROBO2Q9HCK4 1378 aa13.94□□□□□ -0.18
TBCCD1-201ENST00000338733 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
TBCCD1-201ENST00000338733 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
TBCCD1-201ENST00000338733 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
TBCCD1-201ENST00000338733 ADGRB2O60241 1585 aa13.93□□□□□ -0.18
TBCCD1-201ENST00000338733 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
TBCCD1-201ENST00000338733 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
TBCCD1-201ENST00000338733 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
TBCCD1-201ENST00000338733 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
TBCCD1-201ENST00000338733 FOXO3O43524 673 aa13.89□□□□□ -0.19
TBCCD1-201ENST00000338733 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
TBCCD1-201ENST00000338733 SENP3-EIF4A1A0A087X0R7 540 aa13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 KIF1AQ12756 1690 aa13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 TNS1Q9HBL0 1735 aaKnown RBP13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
TBCCD1-201ENST00000338733 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 EZH2Q15910 746 aaKnown RBP13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 SBNO1A3KN83 1393 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 ROCK1Q13464 1354 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
TBCCD1-201ENST00000338733 PSME1Q06323 249 aa13.85□□□□□ -0.19
TBCCD1-201ENST00000338733 PPP1R1BQ9UD71 204 aaPredicted RBP13.85□□□□□ -0.19
TBCCD1-201ENST00000338733 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
TBCCD1-201ENST00000338733 KCNQ2O43526 872 aa13.84□□□□□ -0.19
TBCCD1-201ENST00000338733 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
TBCCD1-201ENST00000338733 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
TBCCD1-201ENST00000338733 NAIPQ13075 1403 aa13.84□□□□□ -0.19
TBCCD1-201ENST00000338733 FAM196AQ6ZSG2 479 aa13.83□□□□□ -0.19
TBCCD1-201ENST00000338733 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.19
TBCCD1-201ENST00000338733 NUP155O75694 1391 aa13.83□□□□□ -0.2
TBCCD1-201ENST00000338733 XPCQ01831 940 aaPredicted RBP13.83□□□□□ -0.2
TBCCD1-201ENST00000338733 FAM98CQ17RN3 349 aaKnown RBP13.83□□□□□ -0.2
TBCCD1-201ENST00000338733 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
TBCCD1-201ENST00000338733 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
TBCCD1-201ENST00000338733 RREB1Q92766 1687 aa13.82□□□□□ -0.2
TBCCD1-201ENST00000338733 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
TBCCD1-201ENST00000338733 A0A0G2JS52 829 aa13.82□□□□□ -0.2
TBCCD1-201ENST00000338733 TECPR2O15040 1411 aa13.82□□□□□ -0.2
TBCCD1-201ENST00000338733 SPATA31A5Q5VU36 1347 aa13.81□□□□□ -0.2
TBCCD1-201ENST00000338733 SPATA31A7Q8IWB4 1347 aa13.81□□□□□ -0.2
TBCCD1-201ENST00000338733 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
TBCCD1-201ENST00000338733 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
TBCCD1-201ENST00000338733 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
TBCCD1-201ENST00000338733 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
TBCCD1-201ENST00000338733 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
TBCCD1-201ENST00000338733 APBA3O96018 575 aa13.78□□□□□ -0.2
TBCCD1-201ENST00000338733 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.2
TBCCD1-201ENST00000338733 FMN2Q9NZ56 1722 aa13.77□□□□□ -0.21
TBCCD1-201ENST00000338733 CLTCL1P53675 1640 aa13.77□□□□□ -0.21
TBCCD1-201ENST00000338733 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
TBCCD1-201ENST00000338733 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
TBCCD1-201ENST00000338733 ABCC11Q96J66 1382 aa13.75□□□□□ -0.21
TBCCD1-201ENST00000338733 TRIM37O94972 964 aa13.75□□□□□ -0.21
TBCCD1-201ENST00000338733 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
TBCCD1-201ENST00000338733 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
TBCCD1-201ENST00000338733 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
TBCCD1-201ENST00000338733 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms