RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
ARHGEF3-202ENST00000338458 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
ARHGEF3-202ENST00000338458 METP08581 1390 aa13.49□□□□□ -0.25
ARHGEF3-202ENST00000338458 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
ARHGEF3-202ENST00000338458 LTKP29376 864 aa13.49□□□□□ -0.25
ARHGEF3-202ENST00000338458 TULP4Q9NRJ4 1543 aa13.49□□□□□ -0.25
ARHGEF3-202ENST00000338458 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
ARHGEF3-202ENST00000338458 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
ARHGEF3-202ENST00000338458 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
ARHGEF3-202ENST00000338458 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
ARHGEF3-202ENST00000338458 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
ARHGEF3-202ENST00000338458 PTPRMP28827 1452 aa13.47□□□□□ -0.25
ARHGEF3-202ENST00000338458 NUDCQ9Y266 331 aa13.46□□□□□ -0.25
ARHGEF3-202ENST00000338458 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
ARHGEF3-202ENST00000338458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.26
ARHGEF3-202ENST00000338458 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
ARHGEF3-202ENST00000338458 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
ARHGEF3-202ENST00000338458 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
ARHGEF3-202ENST00000338458 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
ARHGEF3-202ENST00000338458 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
ARHGEF3-202ENST00000338458 MTHFSP49914 203 aa13.43□□□□□ -0.26
ARHGEF3-202ENST00000338458 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
ARHGEF3-202ENST00000338458 FBLN1P23142 703 aa13.42□□□□□ -0.26
ARHGEF3-202ENST00000338458 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
ARHGEF3-202ENST00000338458 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
ARHGEF3-202ENST00000338458 APAF1O14727 1248 aa13.41□□□□□ -0.26
ARHGEF3-202ENST00000338458 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF3-202ENST00000338458 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
ARHGEF3-202ENST00000338458 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF3-202ENST00000338458 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
ARHGEF3-202ENST00000338458 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
ARHGEF3-202ENST00000338458 C3P01024 1663 aa13.38□□□□□ -0.27
ARHGEF3-202ENST00000338458 FYB1O15117 783 aa13.38□□□□□ -0.27
ARHGEF3-202ENST00000338458 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF3-202ENST00000338458 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
ARHGEF3-202ENST00000338458 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
ARHGEF3-202ENST00000338458 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
ARHGEF3-202ENST00000338458 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
ARHGEF3-202ENST00000338458 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
ARHGEF3-202ENST00000338458 ROBO2Q9HCK4 1378 aa13.37□□□□□ -0.27
ARHGEF3-202ENST00000338458 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
ARHGEF3-202ENST00000338458 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF3-202ENST00000338458 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
ARHGEF3-202ENST00000338458 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
ARHGEF3-202ENST00000338458 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
ARHGEF3-202ENST00000338458 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
ARHGEF3-202ENST00000338458 PLIN1O60240 522 aa13.34□□□□□ -0.27
ARHGEF3-202ENST00000338458 SOX12O15370 315 aa13.33□□□□□ -0.27
ARHGEF3-202ENST00000338458 NME9Q86XW9 330 aa13.33□□□□□ -0.27
ARHGEF3-202ENST00000338458 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
ARHGEF3-202ENST00000338458 PLEKHG1Q9ULL1 1385 aa13.33□□□□□ -0.28
ARHGEF3-202ENST00000338458 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.28
ARHGEF3-202ENST00000338458 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
ARHGEF3-202ENST00000338458 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
ARHGEF3-202ENST00000338458 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
ARHGEF3-202ENST00000338458 RIMS1Q86UR5 1692 aaKnown RBP13.32□□□□□ -0.28
ARHGEF3-202ENST00000338458 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
ARHGEF3-202ENST00000338458 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 DMRT2Q9Y5R5 561 aa13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
ARHGEF3-202ENST00000338458 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
ARHGEF3-202ENST00000338458 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
ARHGEF3-202ENST00000338458 KCNA6P17658 529 aa13.3□□□□□ -0.28
ARHGEF3-202ENST00000338458 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
ARHGEF3-202ENST00000338458 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
ARHGEF3-202ENST00000338458 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
ARHGEF3-202ENST00000338458 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
ARHGEF3-202ENST00000338458 NSD2O96028 1365 aa13.28□□□□□ -0.28
ARHGEF3-202ENST00000338458 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.28
ARHGEF3-202ENST00000338458 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
ARHGEF3-202ENST00000338458 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
ARHGEF3-202ENST00000338458 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
ARHGEF3-202ENST00000338458 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
ARHGEF3-202ENST00000338458 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
ARHGEF3-202ENST00000338458 ACEP12821 1306 aa13.26□□□□□ -0.29
ARHGEF3-202ENST00000338458 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
ARHGEF3-202ENST00000338458 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 COG3Q96JB2 828 aa13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 TECPR2O15040 1411 aa13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 DIAPH1O60610 1272 aaKnown RBP13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 NGDNQ8NEJ9 315 aaKnown RBP13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
ARHGEF3-202ENST00000338458 HMOX1P09601 288 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 SLFN5Q08AF3 891 aa13.24□□□□□ -0.29
ARHGEF3-202ENST00000338458 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms