RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
CDK5RAP3-201ENST00000338399 NPHP4O75161 1426 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-201ENST00000338399 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
CDK5RAP3-201ENST00000338399 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-201ENST00000338399 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
CDK5RAP3-201ENST00000338399 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-201ENST00000338399 SRPK2P78362 688 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-201ENST00000338399 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-201ENST00000338399 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-201ENST00000338399 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-201ENST00000338399 HSPA2P54652 639 aa20.23■□□□□ 0.83
CDK5RAP3-201ENST00000338399 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
CDK5RAP3-201ENST00000338399 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-201ENST00000338399 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
CDK5RAP3-201ENST00000338399 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
CDK5RAP3-201ENST00000338399 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.83
CDK5RAP3-201ENST00000338399 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
CDK5RAP3-201ENST00000338399 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
CDK5RAP3-201ENST00000338399 CCER2I3L3R5 266 aa20.2■□□□□ 0.82
CDK5RAP3-201ENST00000338399 KCNA6P17658 529 aa20.2■□□□□ 0.82
CDK5RAP3-201ENST00000338399 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
CDK5RAP3-201ENST00000338399 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP3-201ENST00000338399 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
CDK5RAP3-201ENST00000338399 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
CDK5RAP3-201ENST00000338399 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
CDK5RAP3-201ENST00000338399 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-201ENST00000338399 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP3-201ENST00000338399 NINLQ9Y2I6 1382 aa20.13■□□□□ 0.81
CDK5RAP3-201ENST00000338399 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
CDK5RAP3-201ENST00000338399 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
CDK5RAP3-201ENST00000338399 RALBP1Q15311 655 aa20.11■□□□□ 0.81
CDK5RAP3-201ENST00000338399 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-201ENST00000338399 NUDT16Q96DE0 195 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-201ENST00000338399 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
CDK5RAP3-201ENST00000338399 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
CDK5RAP3-201ENST00000338399 NSD3Q9BZ95 1437 aa20.09■□□□□ 0.81
CDK5RAP3-201ENST00000338399 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
CDK5RAP3-201ENST00000338399 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP3-201ENST00000338399 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
CDK5RAP3-201ENST00000338399 A0A1W2PP64 1363 aa20.08■□□□□ 0.8
CDK5RAP3-201ENST00000338399 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
CDK5RAP3-201ENST00000338399 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
CDK5RAP3-201ENST00000338399 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-201ENST00000338399 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
CDK5RAP3-201ENST00000338399 ATP7BP35670 1465 aa20.06■□□□□ 0.8
CDK5RAP3-201ENST00000338399 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
CDK5RAP3-201ENST00000338399 PPIP5K1Q6PFW1 1433 aa20.06■□□□□ 0.8
CDK5RAP3-201ENST00000338399 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
CDK5RAP3-201ENST00000338399 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-201ENST00000338399 NALCNQ8IZF0 1738 aa20.05■□□□□ 0.8
CDK5RAP3-201ENST00000338399 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
CDK5RAP3-201ENST00000338399 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP3-201ENST00000338399 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
CDK5RAP3-201ENST00000338399 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
CDK5RAP3-201ENST00000338399 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
CDK5RAP3-201ENST00000338399 RGPD8O14715 1765 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-201ENST00000338399 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-201ENST00000338399 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.79
CDK5RAP3-201ENST00000338399 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
CDK5RAP3-201ENST00000338399 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
CDK5RAP3-201ENST00000338399 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-201ENST00000338399 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CDK5RAP3-201ENST00000338399 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
CDK5RAP3-201ENST00000338399 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
CDK5RAP3-201ENST00000338399 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
CDK5RAP3-201ENST00000338399 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-201ENST00000338399 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
CDK5RAP3-201ENST00000338399 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
CDK5RAP3-201ENST00000338399 BRD4O60885 1362 aaPredicted RBP19.98■□□□□ 0.79
CDK5RAP3-201ENST00000338399 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
CDK5RAP3-201ENST00000338399 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
CDK5RAP3-201ENST00000338399 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
CDK5RAP3-201ENST00000338399 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
CDK5RAP3-201ENST00000338399 MORC1Q86VD1 984 aa19.95■□□□□ 0.78
CDK5RAP3-201ENST00000338399 NSD2O96028 1365 aa19.95■□□□□ 0.78
CDK5RAP3-201ENST00000338399 ACEP12821 1306 aa19.94■□□□□ 0.78
CDK5RAP3-201ENST00000338399 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
CDK5RAP3-201ENST00000338399 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
CDK5RAP3-201ENST00000338399 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
CDK5RAP3-201ENST00000338399 ZNF692Q9BU19 519 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-201ENST00000338399 FYB1O15117 783 aa19.93■□□□□ 0.78
CDK5RAP3-201ENST00000338399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDK5RAP3-201ENST00000338399 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-201ENST00000338399 TMEM94Q12767 1356 aa19.93■□□□□ 0.78
CDK5RAP3-201ENST00000338399 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
CDK5RAP3-201ENST00000338399 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
CDK5RAP3-201ENST00000338399 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-201ENST00000338399 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-201ENST00000338399 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-201ENST00000338399 C19orf44Q9H6X5 657 aa19.9■□□□□ 0.78
CDK5RAP3-201ENST00000338399 DMRT2Q9Y5R5 561 aa19.9■□□□□ 0.78
CDK5RAP3-201ENST00000338399 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-201ENST00000338399 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-201ENST00000338399 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
CDK5RAP3-201ENST00000338399 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
CDK5RAP3-201ENST00000338399 XIRP1Q702N8 1843 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-201ENST00000338399 USP6P35125 1406 aa19.87■□□□□ 0.77
CDK5RAP3-201ENST00000338399 NME9Q86XW9 330 aa19.86■□□□□ 0.77
CDK5RAP3-201ENST00000338399 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
CDK5RAP3-201ENST00000338399 TTC21BQ7Z4L5 1316 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms