RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 LRP6O75581 1613 aa15.77■□□□□ 0.12
CAPN3-202ENST00000337571 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
CAPN3-202ENST00000337571 C1orf167Q5SNV9 1468 aa15.76■□□□□ 0.11
CAPN3-202ENST00000337571 RXRBP28702 533 aa15.75■□□□□ 0.11
CAPN3-202ENST00000337571 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
CAPN3-202ENST00000337571 ESCO1Q5FWF5 840 aa15.74■□□□□ 0.11
CAPN3-202ENST00000337571 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
CAPN3-202ENST00000337571 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
CAPN3-202ENST00000337571 AFF2P51816 1311 aa15.72■□□□□ 0.11
CAPN3-202ENST00000337571 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
CAPN3-202ENST00000337571 TMEM132EQ6IEE7 984 aa15.72■□□□□ 0.11
CAPN3-202ENST00000337571 WAPLQ7Z5K2 1190 aa15.71■□□□□ 0.11
CAPN3-202ENST00000337571 NGLY1Q96IV0 654 aa15.71■□□□□ 0.11
CAPN3-202ENST00000337571 PNPLA6Q8IY17 1366 aa15.71■□□□□ 0.11
CAPN3-202ENST00000337571 IFT172Q9UG01 1749 aa15.71■□□□□ 0.1
CAPN3-202ENST00000337571 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
CAPN3-202ENST00000337571 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
CAPN3-202ENST00000337571 SOS2Q07890 1332 aaPredicted RBP15.69■□□□□ 0.1
CAPN3-202ENST00000337571 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
CAPN3-202ENST00000337571 ABCC11Q96J66 1382 aa15.69■□□□□ 0.1
CAPN3-202ENST00000337571 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
CAPN3-202ENST00000337571 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
CAPN3-202ENST00000337571 NUTM2FA1L443 756 aa15.68■□□□□ 0.1
CAPN3-202ENST00000337571 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
CAPN3-202ENST00000337571 FOXO3O43524 673 aa15.67■□□□□ 0.1
CAPN3-202ENST00000337571 C14orf93Q9H972 538 aaKnown RBP15.67■□□□□ 0.1
CAPN3-202ENST00000337571 LAMC1P11047 1609 aa15.67■□□□□ 0.1
CAPN3-202ENST00000337571 PIK3C2GO75747 1445 aa15.67■□□□□ 0.1
CAPN3-202ENST00000337571 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
CAPN3-202ENST00000337571 SIRT1Q96EB6 747 aa15.66■□□□□ 0.1
CAPN3-202ENST00000337571 TECPR2O15040 1411 aa15.66■□□□□ 0.1
CAPN3-202ENST00000337571 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
CAPN3-202ENST00000337571 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
CAPN3-202ENST00000337571 RBM6P78332 1123 aaKnown RBP15.65■□□□□ 0.1
CAPN3-202ENST00000337571 CFAP70Q5T0N1 1121 aa15.65■□□□□ 0.1
CAPN3-202ENST00000337571 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
CAPN3-202ENST00000337571 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
CAPN3-202ENST00000337571 POGKQ9P215 609 aa15.63■□□□□ 0.09
CAPN3-202ENST00000337571 USP21Q9UK80 565 aa15.63■□□□□ 0.09
CAPN3-202ENST00000337571 PLEKHH1Q9ULM0 1364 aa15.62■□□□□ 0.09
CAPN3-202ENST00000337571 CDK12Q9NYV4 1490 aaPredicted RBP15.61■□□□□ 0.09
CAPN3-202ENST00000337571 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
CAPN3-202ENST00000337571 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
CAPN3-202ENST00000337571 MYOM2P54296 1465 aa15.6■□□□□ 0.09
CAPN3-202ENST00000337571 HRCP23327 699 aa15.6■□□□□ 0.09
CAPN3-202ENST00000337571 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
CAPN3-202ENST00000337571 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
CAPN3-202ENST00000337571 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
CAPN3-202ENST00000337571 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
CAPN3-202ENST00000337571 PSME1Q06323 249 aa15.59■□□□□ 0.09
CAPN3-202ENST00000337571 KRT28Q7Z3Y7 464 aa15.59■□□□□ 0.09
CAPN3-202ENST00000337571 STAC3Q96MF2 364 aa15.59■□□□□ 0.09
CAPN3-202ENST00000337571 FMN2Q9NZ56 1722 aa15.59■□□□□ 0.09
CAPN3-202ENST00000337571 NRXN1Q9ULB1 1477 aa15.59■□□□□ 0.09
CAPN3-202ENST00000337571 COL22A1Q8NFW1 1626 aaPredicted RBP15.58■□□□□ 0.09
CAPN3-202ENST00000337571 SLC4A2P04920 1241 aa15.58■□□□□ 0.08
CAPN3-202ENST00000337571 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
CAPN3-202ENST00000337571 PHF8Q9UPP1 1060 aa15.58■□□□□ 0.08
CAPN3-202ENST00000337571 PXDNQ92626 1479 aa15.58■□□□□ 0.08
CAPN3-202ENST00000337571 HAP1P54257 671 aaPredicted RBP15.57■□□□□ 0.08
CAPN3-202ENST00000337571 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
CAPN3-202ENST00000337571 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
CAPN3-202ENST00000337571 RGPD8O14715 1765 aaPredicted RBP15.56■□□□□ 0.08
CAPN3-202ENST00000337571 SPATA31A3Q5VYP0 1347 aa15.55■□□□□ 0.08
CAPN3-202ENST00000337571 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
CAPN3-202ENST00000337571 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
CAPN3-202ENST00000337571 RGS12O14924 1447 aa15.53■□□□□ 0.08
CAPN3-202ENST00000337571 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
CAPN3-202ENST00000337571 DLC1Q96QB1 1528 aa15.52■□□□□ 0.07
CAPN3-202ENST00000337571 PMFBP1Q8TBY8 1022 aa15.51■□□□□ 0.07
CAPN3-202ENST00000337571 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
CAPN3-202ENST00000337571 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
CAPN3-202ENST00000337571 GJD4Q96KN9 370 aaPredicted RBP15.5■□□□□ 0.07
CAPN3-202ENST00000337571 ATRNO75882 1429 aa15.5■□□□□ 0.07
CAPN3-202ENST00000337571 EIF3AQ14152 1382 aaKnown RBP15.49■□□□□ 0.07
CAPN3-202ENST00000337571 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
CAPN3-202ENST00000337571 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
CAPN3-202ENST00000337571 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
CAPN3-202ENST00000337571 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 TNS3Q68CZ2 1445 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 ARHGEF10O15013 1369 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
CAPN3-202ENST00000337571 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-202ENST00000337571 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
CAPN3-202ENST00000337571 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
CAPN3-202ENST00000337571 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
CAPN3-202ENST00000337571 NGDNQ8NEJ9 315 aaKnown RBP15.46■□□□□ 0.07
CAPN3-202ENST00000337571 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
CAPN3-202ENST00000337571 CCDC9Q9Y3X0 531 aaKnown RBP15.45■□□□□ 0.06
CAPN3-202ENST00000337571 ADGRB2O60241 1585 aa15.45■□□□□ 0.06
CAPN3-202ENST00000337571 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
CAPN3-202ENST00000337571 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
CAPN3-202ENST00000337571 USP32Q8NFA0 1604 aa15.43■□□□□ 0.06
CAPN3-202ENST00000337571 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
CAPN3-202ENST00000337571 SLIT2O94813 1529 aa15.42■□□□□ 0.06
CAPN3-202ENST00000337571 NUDT16Q96DE0 195 aaKnown RBP15.41■□□□□ 0.06
CAPN3-202ENST00000337571 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
CAPN3-202ENST00000337571 PRR36Q9H6K5 1346 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms