RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
PBRM1-202ENST00000337303 CCDC9Q9Y3X0 531 aaKnown RBP8.2□□□□□ -1.1
PBRM1-202ENST00000337303 ESPNB1AK53 854 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 DDX58O95786 925 aaKnown RBP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 RUSC2Q8N2Y8 1516 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 MYOM3Q5VTT5 1437 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 GRPEL1Q9HAV7 217 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 CWC22Q9HCG8 908 aaKnown RBP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 FGD6Q6ZV73 1430 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 SMARCA4P51532 1647 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 PSMA5P28066 241 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 NEK4P51957 841 aa8.19□□□□□ -1.1
PBRM1-202ENST00000337303 CIZ1Q9ULV3 898 aaPredicted RBP8.19□□□□□ -1.1
PBRM1-202ENST00000337303 CCP110O43303 1012 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 EIF2S2P20042 333 aaKnown RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 GTF2E1P29083 439 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 DHX8Q14562 1220 aaKnown RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 OLFM4Q6UX06 510 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 NUTM2FA1L443 756 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 KINO60870 393 aaKnown RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 GCC1Q96CN9 775 aa8.18□□□□□ -1.1
PBRM1-202ENST00000337303 MINK1Q8N4C8 1332 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-202ENST00000337303 APPP05067 770 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 MCM4P33991 863 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 RBM10P98175 930 aaKnown RBP8.17□□□□□ -1.1
PBRM1-202ENST00000337303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.17□□□□□ -1.1
PBRM1-202ENST00000337303 H0YHG0 523 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 RALYLQ86SE5 291 aaKnown RBP8.17□□□□□ -1.1
PBRM1-202ENST00000337303 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 NINLQ9Y2I6 1382 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
PBRM1-202ENST00000337303 GNAI3P08754 354 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 SMG6Q86US8 1419 aaKnown RBP8.16□□□□□ -1.1
PBRM1-202ENST00000337303 RRP12Q5JTH9 1297 aaKnown RBP8.16□□□□□ -1.1
PBRM1-202ENST00000337303 UBTFL1P0CB47 393 aaPredicted RBP8.16□□□□□ -1.1
PBRM1-202ENST00000337303 CALRP27797 417 aaKnown RBP8.16□□□□□ -1.1
PBRM1-202ENST00000337303 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 TTC5Q8N0Z6 440 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 CNTROBQ8N137 903 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
PBRM1-202ENST00000337303 TSPYL4Q9UJ04 414 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
PBRM1-202ENST00000337303 CLASRPQ8N2M8 674 aaKnown RBP8.15□□□□□ -1.1
PBRM1-202ENST00000337303 CCDC112Q8NEF3 446 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 ERICH2A1L162 156 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
PBRM1-202ENST00000337303 CCDC192P0DO97 292 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 PDILTQ8N807 584 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 FIBPO43427 364 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 LEKR1Q6ZMV7 388 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 AMOTL1Q8IY63 956 aa8.15□□□□□ -1.1
PBRM1-202ENST00000337303 G3V3G9 751 aa8.15□□□□□ -1.11
PBRM1-202ENST00000337303 PPP2R1AP30153 589 aa8.15□□□□□ -1.11
PBRM1-202ENST00000337303 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.11
PBRM1-202ENST00000337303 NECTIN2Q92692 538 aa8.15□□□□□ -1.11
PBRM1-202ENST00000337303 WDR33Q9C0J8 1336 aaKnown RBP8.14□□□□□ -1.11
PBRM1-202ENST00000337303 CCDC191Q8NCU4 936 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-202ENST00000337303 MTHFSP49914 203 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 NAP1L1P55209 391 aaKnown RBP8.14□□□□□ -1.11
PBRM1-202ENST00000337303 ZSCAN30Q86W11 494 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 RDXP35241 583 aaKnown RBP8.14□□□□□ -1.11
PBRM1-202ENST00000337303 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 PRM3Q9NNZ6 103 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 SMC2O95347 1197 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 UQCRHP07919 91 aa8.14□□□□□ -1.11
PBRM1-202ENST00000337303 CAGE1Q8TC20 777 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 HIP1O00291 1037 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 EXOSC9Q06265 439 aaKnown RBP8.13□□□□□ -1.11
PBRM1-202ENST00000337303 OFD1O75665 1012 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 FOSBP53539 338 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 FILIP1LQ4L180 1135 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 SMARCE1Q969G3 411 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 NOL10Q9BSC4 688 aaKnown RBP8.13□□□□□ -1.11
PBRM1-202ENST00000337303 CUX1P39880 1505 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 HMOX1P09601 288 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 XBP1P17861 261 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
PBRM1-202ENST00000337303 ZNF396Q96N95 335 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-202ENST00000337303 SURF6O75683 361 aaKnown RBP8.12□□□□□ -1.11
PBRM1-202ENST00000337303 PDCL2Q8N4E4 241 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 SPC24Q8NBT2 197 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 FSD1Q9BTV5 496 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-202ENST00000337303 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 LRRC9Q6ZRR7 1453 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 ANKRD50Q9ULJ7 1429 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 BCAR3O75815 825 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 KRT85P78386 507 aa8.12□□□□□ -1.11
PBRM1-202ENST00000337303 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms