RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
CLDN2-201ENST00000336803 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
CLDN2-201ENST00000336803 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
CLDN2-201ENST00000336803 NSD2O96028 1365 aa12.28□□□□□ -0.44
CLDN2-201ENST00000336803 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
CLDN2-201ENST00000336803 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
CLDN2-201ENST00000336803 EIF5BO60841 1220 aaKnown RBP12.27□□□□□ -0.44
CLDN2-201ENST00000336803 UBE2Q2Q8WVN8 375 aa12.27□□□□□ -0.44
CLDN2-201ENST00000336803 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.44
CLDN2-201ENST00000336803 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.45
CLDN2-201ENST00000336803 SLC12A5Q9H2X9 1139 aa12.27□□□□□ -0.45
CLDN2-201ENST00000336803 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
CLDN2-201ENST00000336803 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLDN2-201ENST00000336803 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
CLDN2-201ENST00000336803 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
CLDN2-201ENST00000336803 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
CLDN2-201ENST00000336803 ABCC11Q96J66 1382 aa12.25□□□□□ -0.45
CLDN2-201ENST00000336803 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
CLDN2-201ENST00000336803 TNRQ92752 1358 aa12.25□□□□□ -0.45
CLDN2-201ENST00000336803 MLECQ14165 292 aa12.24□□□□□ -0.45
CLDN2-201ENST00000336803 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLDN2-201ENST00000336803 MED14O60244 1454 aa12.24□□□□□ -0.45
CLDN2-201ENST00000336803 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
CLDN2-201ENST00000336803 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
CLDN2-201ENST00000336803 CGNL1Q0VF96 1302 aa12.24□□□□□ -0.45
CLDN2-201ENST00000336803 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
CLDN2-201ENST00000336803 PRAM1Q96QH2 718 aa12.23□□□□□ -0.45
CLDN2-201ENST00000336803 ESF1Q9H501 851 aaKnown RBP12.23□□□□□ -0.45
CLDN2-201ENST00000336803 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
CLDN2-201ENST00000336803 SIRT1Q96EB6 747 aa12.23□□□□□ -0.45
CLDN2-201ENST00000336803 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
CLDN2-201ENST00000336803 TECPR2O15040 1411 aa12.22□□□□□ -0.45
CLDN2-201ENST00000336803 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
CLDN2-201ENST00000336803 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
CLDN2-201ENST00000336803 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
CLDN2-201ENST00000336803 STK26Q9P289 416 aa12.21□□□□□ -0.45
CLDN2-201ENST00000336803 CPS1P31327 1500 aa12.21□□□□□ -0.45
CLDN2-201ENST00000336803 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
CLDN2-201ENST00000336803 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.46
CLDN2-201ENST00000336803 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 TMEM2Q9UHN6 1383 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 C3P01024 1663 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 POGKQ9P215 609 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 RCAN3Q9UKA8 241 aa12.2□□□□□ -0.46
CLDN2-201ENST00000336803 ATP7BP35670 1465 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 RRP1P56182 461 aaKnown RBP12.18□□□□□ -0.46
CLDN2-201ENST00000336803 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
CLDN2-201ENST00000336803 METP08581 1390 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
CLDN2-201ENST00000336803 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
CLDN2-201ENST00000336803 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 TERF2IPQ9NYB0 399 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 FER1L4A9Z1Z3 1794 aa12.18□□□□□ -0.46
CLDN2-201ENST00000336803 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
CLDN2-201ENST00000336803 SLIT1O75093 1534 aa12.17□□□□□ -0.46
CLDN2-201ENST00000336803 SAFB2Q14151 953 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLDN2-201ENST00000336803 ARHGAP23Q9P227 1491 aa12.17□□□□□ -0.46
CLDN2-201ENST00000336803 SALL2Q9Y467 1007 aaPredicted RBP12.16□□□□□ -0.46
CLDN2-201ENST00000336803 PLEKHG1Q9ULL1 1385 aa12.16□□□□□ -0.46
CLDN2-201ENST00000336803 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
CLDN2-201ENST00000336803 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
CLDN2-201ENST00000336803 ADGRB2O60241 1585 aa12.16□□□□□ -0.46
CLDN2-201ENST00000336803 DUSP27Q5VZP5 1158 aa12.15□□□□□ -0.46
CLDN2-201ENST00000336803 GOLGA2Q08379 1002 aa12.15□□□□□ -0.47
CLDN2-201ENST00000336803 SLFN5Q08AF3 891 aa12.15□□□□□ -0.47
CLDN2-201ENST00000336803 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
CLDN2-201ENST00000336803 CPSF1Q10570 1443 aaKnown RBP12.14□□□□□ -0.47
CLDN2-201ENST00000336803 MTHFSP49914 203 aa12.13□□□□□ -0.47
CLDN2-201ENST00000336803 HDGFL2Q7Z4V5 671 aaPredicted RBP12.13□□□□□ -0.47
CLDN2-201ENST00000336803 CDC42BPGQ6DT37 1551 aa12.13□□□□□ -0.47
CLDN2-201ENST00000336803 FYB1O15117 783 aa12.13□□□□□ -0.47
CLDN2-201ENST00000336803 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
CLDN2-201ENST00000336803 CFAP53Q96M91 514 aa12.13□□□□□ -0.47
CLDN2-201ENST00000336803 APAF1O14727 1248 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
CLDN2-201ENST00000336803 B4GALNT3Q6L9W6 998 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
CLDN2-201ENST00000336803 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
CLDN2-201ENST00000336803 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
CLDN2-201ENST00000336803 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
CLDN2-201ENST00000336803 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
CLDN2-201ENST00000336803 E9PSI1 815 aa12.1□□□□□ -0.47
CLDN2-201ENST00000336803 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
CLDN2-201ENST00000336803 EDC4Q6P2E9 1401 aaKnown RBP12.1□□□□□ -0.47
CLDN2-201ENST00000336803 LTKP29376 864 aa12.09□□□□□ -0.47
CLDN2-201ENST00000336803 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.09□□□□□ -0.47
CLDN2-201ENST00000336803 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
CLDN2-201ENST00000336803 ITSN1Q15811 1721 aa12.08□□□□□ -0.47
CLDN2-201ENST00000336803 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
CLDN2-201ENST00000336803 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
CLDN2-201ENST00000336803 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
CLDN2-201ENST00000336803 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
CLDN2-201ENST00000336803 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms