RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
LRAT-201ENST00000336356 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
LRAT-201ENST00000336356 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 KCNA6P17658 529 aa13.82□□□□□ -0.2
LRAT-201ENST00000336356 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
LRAT-201ENST00000336356 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
LRAT-201ENST00000336356 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
LRAT-201ENST00000336356 RWDD1Q9H446 243 aaPredicted RBP13.81□□□□□ -0.2
LRAT-201ENST00000336356 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
LRAT-201ENST00000336356 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
LRAT-201ENST00000336356 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
LRAT-201ENST00000336356 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
LRAT-201ENST00000336356 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
LRAT-201ENST00000336356 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
LRAT-201ENST00000336356 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
LRAT-201ENST00000336356 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
LRAT-201ENST00000336356 LRRC59Q96AG4 307 aaKnown RBP13.79□□□□□ -0.2
LRAT-201ENST00000336356 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
LRAT-201ENST00000336356 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
LRAT-201ENST00000336356 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
LRAT-201ENST00000336356 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
LRAT-201ENST00000336356 SOX12O15370 315 aa13.78□□□□□ -0.2
LRAT-201ENST00000336356 NPATQ14207 1427 aa13.78□□□□□ -0.2
LRAT-201ENST00000336356 DIP2BQ9P265 1576 aa13.77□□□□□ -0.2
LRAT-201ENST00000336356 PLIN1O60240 522 aa13.77□□□□□ -0.21
LRAT-201ENST00000336356 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.21
LRAT-201ENST00000336356 RIMS2Q9UQ26 1411 aa13.77□□□□□ -0.21
LRAT-201ENST00000336356 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
LRAT-201ENST00000336356 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
LRAT-201ENST00000336356 ABCA9Q8IUA7 1624 aa13.76□□□□□ -0.21
LRAT-201ENST00000336356 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
LRAT-201ENST00000336356 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
LRAT-201ENST00000336356 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
LRAT-201ENST00000336356 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
LRAT-201ENST00000336356 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
LRAT-201ENST00000336356 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
LRAT-201ENST00000336356 ARID3AQ99856 593 aa13.74□□□□□ -0.21
LRAT-201ENST00000336356 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
LRAT-201ENST00000336356 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
LRAT-201ENST00000336356 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
LRAT-201ENST00000336356 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
LRAT-201ENST00000336356 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
LRAT-201ENST00000336356 ABTB2Q8N961 1025 aa13.72□□□□□ -0.21
LRAT-201ENST00000336356 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
LRAT-201ENST00000336356 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
LRAT-201ENST00000336356 RPRD2Q5VT52 1461 aaKnown RBP13.71□□□□□ -0.21
LRAT-201ENST00000336356 NLRP6P59044 892 aa13.71□□□□□ -0.21
LRAT-201ENST00000336356 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
LRAT-201ENST00000336356 ZMYND15Q9H091 742 aa13.71□□□□□ -0.21
LRAT-201ENST00000336356 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.21
LRAT-201ENST00000336356 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
LRAT-201ENST00000336356 NEUROD2Q15784 382 aa13.71□□□□□ -0.22
LRAT-201ENST00000336356 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
LRAT-201ENST00000336356 NPHP4O75161 1426 aaPredicted RBP13.7□□□□□ -0.22
LRAT-201ENST00000336356 ABCC1P33527 1531 aa13.7□□□□□ -0.22
LRAT-201ENST00000336356 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
LRAT-201ENST00000336356 SYAP1Q96A49 352 aaPredicted RBP13.7□□□□□ -0.22
LRAT-201ENST00000336356 USP47Q96K76 1375 aa13.7□□□□□ -0.22
LRAT-201ENST00000336356 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
LRAT-201ENST00000336356 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
LRAT-201ENST00000336356 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
LRAT-201ENST00000336356 TRAK2O60296 914 aa13.68□□□□□ -0.22
LRAT-201ENST00000336356 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
LRAT-201ENST00000336356 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
LRAT-201ENST00000336356 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
LRAT-201ENST00000336356 ESPNB1AK53 854 aa13.67□□□□□ -0.22
LRAT-201ENST00000336356 CFAP70Q5T0N1 1121 aa13.67□□□□□ -0.22
LRAT-201ENST00000336356 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
LRAT-201ENST00000336356 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
LRAT-201ENST00000336356 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
LRAT-201ENST00000336356 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
LRAT-201ENST00000336356 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
LRAT-201ENST00000336356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRAT-201ENST00000336356 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
LRAT-201ENST00000336356 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
LRAT-201ENST00000336356 AAMPQ13685 434 aa13.65□□□□□ -0.22
LRAT-201ENST00000336356 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
LRAT-201ENST00000336356 SAMD9LQ8IVG5 1584 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 AGLP35573 1532 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 PTPRMP28827 1452 aa13.64□□□□□ -0.23
LRAT-201ENST00000336356 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
LRAT-201ENST00000336356 NAIPQ13075 1403 aa13.63□□□□□ -0.23
LRAT-201ENST00000336356 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
LRAT-201ENST00000336356 E9PSI1 815 aa13.63□□□□□ -0.23
LRAT-201ENST00000336356 CCDC173Q0VFZ6 552 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 UGGT1Q9NYU2 1555 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
LRAT-201ENST00000336356 ADGRL2O95490 1459 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
LRAT-201ENST00000336356 FBXO41Q8TF61 875 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms