RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 L1TD1Q5T7N2 865 aaKnown RBP8.15□□□□□ -1.1
HMG20A-201ENST00000336216 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
HMG20A-201ENST00000336216 TRAPPC8Q9Y2L5 1435 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 E9PSI1 815 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 COG3Q96JB2 828 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 CABP1Q9NZU7 370 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 ABCC1P33527 1531 aa8.15□□□□□ -1.1
HMG20A-201ENST00000336216 DIAPH1O60610 1272 aaKnown RBP8.15□□□□□ -1.11
HMG20A-201ENST00000336216 MAST1Q9Y2H9 1570 aa8.14□□□□□ -1.11
HMG20A-201ENST00000336216 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
HMG20A-201ENST00000336216 ADGRF5Q8IZF2 1346 aa8.14□□□□□ -1.11
HMG20A-201ENST00000336216 RPRD2Q5VT52 1461 aaKnown RBP8.14□□□□□ -1.11
HMG20A-201ENST00000336216 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
HMG20A-201ENST00000336216 CFAP74Q9C0B2 1584 aa8.14□□□□□ -1.11
HMG20A-201ENST00000336216 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
HMG20A-201ENST00000336216 ZNF518AQ6AHZ1 1483 aa8.14□□□□□ -1.11
HMG20A-201ENST00000336216 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
HMG20A-201ENST00000336216 ABCA9Q8IUA7 1624 aa8.13□□□□□ -1.11
HMG20A-201ENST00000336216 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
HMG20A-201ENST00000336216 CCDC9Q9Y3X0 531 aaKnown RBP8.13□□□□□ -1.11
HMG20A-201ENST00000336216 ARHGEF12Q9NZN5 1544 aa8.13□□□□□ -1.11
HMG20A-201ENST00000336216 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
HMG20A-201ENST00000336216 HSP90AA2PQ14568 343 aaPredicted RBP8.13□□□□□ -1.11
HMG20A-201ENST00000336216 KCNJ4P48050 445 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 PLCB2Q00722 1185 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 NAP1L2Q9ULW6 460 aaPredicted RBP8.12□□□□□ -1.11
HMG20A-201ENST00000336216 TEX14Q8IWB6 1497 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 PLXNC1O60486 1568 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 ZKSCAN2Q63HK3 967 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
HMG20A-201ENST00000336216 THUMPD2Q9BTF0 503 aaKnown RBP8.12□□□□□ -1.11
HMG20A-201ENST00000336216 LNPKQ9C0E8 428 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 DHX29Q7Z478 1369 aaKnown RBP8.11□□□□□ -1.11
HMG20A-201ENST00000336216 FAM135AQ9P2D6 1515 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-201ENST00000336216 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-201ENST00000336216 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 NEO1Q92859 1461 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 ATP7AQ04656 1500 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 PRKAR2BP31323 418 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 CEBPAP49715 358 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-201ENST00000336216 IDI1Q13907 227 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
HMG20A-201ENST00000336216 CASC1Q6TDU7 716 aa8.11□□□□□ -1.11
HMG20A-201ENST00000336216 EXOSC9Q06265 439 aaKnown RBP8.1□□□□□ -1.11
HMG20A-201ENST00000336216 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
HMG20A-201ENST00000336216 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
HMG20A-201ENST00000336216 HSCBQ8IWL3 235 aa8.1□□□□□ -1.11
HMG20A-201ENST00000336216 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
HMG20A-201ENST00000336216 CDK19Q9BWU1 502 aa8.1□□□□□ -1.11
HMG20A-201ENST00000336216 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
HMG20A-201ENST00000336216 KDM5DQ9BY66 1539 aa8.1□□□□□ -1.11
HMG20A-201ENST00000336216 NLRP6P59044 892 aa8.09□□□□□ -1.11
HMG20A-201ENST00000336216 DZIP1LQ8IYY4 767 aaKnown RBP8.09□□□□□ -1.11
HMG20A-201ENST00000336216 FAM43AQ8N2R8 423 aa8.09□□□□□ -1.11
HMG20A-201ENST00000336216 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
HMG20A-201ENST00000336216 RNF123Q5XPI4 1314 aa8.09□□□□□ -1.11
HMG20A-201ENST00000336216 FGD1P98174 961 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 XPCQ01831 940 aaPredicted RBP8.08□□□□□ -1.12
HMG20A-201ENST00000336216 UBE2Q2Q8WVN8 375 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 RIMBP3CA6NJZ7 1639 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 RIMBP3BA6NNM3 1639 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 RIMBP3Q9UFD9 1639 aa8.08□□□□□ -1.12
HMG20A-201ENST00000336216 CALD1Q05682 793 aaKnown RBP8.07□□□□□ -1.12
HMG20A-201ENST00000336216 A2MP01023 1474 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 PSME1Q06323 249 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 DCTN1Q14203 1278 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 ZFYVE16Q7Z3T8 1539 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 SEC24BO95487 1268 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 C8orf34Q49A92 452 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
HMG20A-201ENST00000336216 DISP3Q9P2K9 1392 aa8.07□□□□□ -1.12
HMG20A-201ENST00000336216 PKNOX2Q96KN3 472 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 SULT6B1Q6IMI4 303 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 RILPL2Q969X0 211 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 PANK2Q9BZ23 570 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 MIS18AQ9NYP9 233 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 IGHDP01880 384 aa8.06□□□□□ -1.12
HMG20A-201ENST00000336216 NPHP1O15259 732 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 UNC13BO14795 1591 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 FKBP5Q13451 457 aaPredicted RBP8.05□□□□□ -1.12
HMG20A-201ENST00000336216 TRAK2O60296 914 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 TEFQ10587 303 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 AMER1Q5JTC6 1135 aaPredicted RBP8.05□□□□□ -1.12
HMG20A-201ENST00000336216 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 ABTB2Q8N961 1025 aa8.05□□□□□ -1.12
HMG20A-201ENST00000336216 MLH3Q9UHC1 1453 aa8.04□□□□□ -1.12
HMG20A-201ENST00000336216 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
HMG20A-201ENST00000336216 PDZRN3Q9UPQ7 1066 aa8.04□□□□□ -1.12
HMG20A-201ENST00000336216 RRAGDQ9NQL2 400 aaPredicted RBP8.04□□□□□ -1.12
HMG20A-201ENST00000336216 DNTTIP2Q5QJE6 756 aaKnown RBP8.04□□□□□ -1.12
HMG20A-201ENST00000336216 TSPYL4Q9UJ04 414 aa8.04□□□□□ -1.12
HMG20A-201ENST00000336216 NOB1Q9ULX3 412 aaKnown RBP8.04□□□□□ -1.12
HMG20A-201ENST00000336216 MSNP26038 577 aaKnown RBP8.03□□□□□ -1.12
HMG20A-201ENST00000336216 AIMP1Q12904 312 aaKnown RBP8.03□□□□□ -1.12
HMG20A-201ENST00000336216 IQGAP3Q86VI3 1631 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms