RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 MED14O60244 1454 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 NOS1P29475 1434 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 NPHP4O75161 1426 aaPredicted RBP12.17□□□□□ -0.46
TREM1-202ENST00000334475 INSRP06213 1382 aa12.17□□□□□ -0.46
TREM1-202ENST00000334475 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 MYOM1P52179 1685 aa12.16□□□□□ -0.46
TREM1-202ENST00000334475 TOM1O60784 492 aa12.15□□□□□ -0.46
TREM1-202ENST00000334475 XIRP1Q702N8 1843 aaKnown RBP12.15□□□□□ -0.46
TREM1-202ENST00000334475 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
TREM1-202ENST00000334475 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
TREM1-202ENST00000334475 ERICH6BQ5W0A0 696 aa12.13□□□□□ -0.47
TREM1-202ENST00000334475 POTEHQ6S545 545 aa12.13□□□□□ -0.47
TREM1-202ENST00000334475 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
TREM1-202ENST00000334475 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
TREM1-202ENST00000334475 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
TREM1-202ENST00000334475 LTKP29376 864 aa12.12□□□□□ -0.47
TREM1-202ENST00000334475 NLRP13Q86W25 1043 aa12.12□□□□□ -0.47
TREM1-202ENST00000334475 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
TREM1-202ENST00000334475 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
TREM1-202ENST00000334475 NPC1L1Q9UHC9 1359 aa12.11□□□□□ -0.47
TREM1-202ENST00000334475 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
TREM1-202ENST00000334475 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
TREM1-202ENST00000334475 ERVK-7P63135 1459 aa12.1□□□□□ -0.47
TREM1-202ENST00000334475 FKBP8Q14318 412 aa12.1□□□□□ -0.47
TREM1-202ENST00000334475 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
TREM1-202ENST00000334475 PNISRQ8TF01 805 aaKnown RBP12.1□□□□□ -0.47
TREM1-202ENST00000334475 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
TREM1-202ENST00000334475 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
TREM1-202ENST00000334475 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
TREM1-202ENST00000334475 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
TREM1-202ENST00000334475 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
TREM1-202ENST00000334475 ASXL1Q8IXJ9 1541 aa12.09□□□□□ -0.47
TREM1-202ENST00000334475 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
TREM1-202ENST00000334475 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
TREM1-202ENST00000334475 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
TREM1-202ENST00000334475 ARHGEF28Q8N1W1 1705 aaKnown RBP12.07□□□□□ -0.48
TREM1-202ENST00000334475 SLC52A1Q9NWF4 448 aa12.07□□□□□ -0.48
TREM1-202ENST00000334475 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
TREM1-202ENST00000334475 ADGRF5Q8IZF2 1346 aa12.07□□□□□ -0.48
TREM1-202ENST00000334475 RBM33Q96EV2 1170 aaKnown RBP12.06□□□□□ -0.48
TREM1-202ENST00000334475 PANK3Q9H999 370 aa12.06□□□□□ -0.48
TREM1-202ENST00000334475 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
TREM1-202ENST00000334475 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
TREM1-202ENST00000334475 MYO5BQ9ULV0 1848 aa12.05□□□□□ -0.48
TREM1-202ENST00000334475 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
TREM1-202ENST00000334475 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
TREM1-202ENST00000334475 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
TREM1-202ENST00000334475 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
TREM1-202ENST00000334475 PUS7Q96PZ0 661 aaKnown RBP12.03□□□□□ -0.48
TREM1-202ENST00000334475 NUDCQ9Y266 331 aa12.03□□□□□ -0.48
TREM1-202ENST00000334475 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
TREM1-202ENST00000334475 CENPJQ9HC77 1338 aaPredicted RBP12.03□□□□□ -0.48
TREM1-202ENST00000334475 SLIT1O75093 1534 aa12.02□□□□□ -0.48
TREM1-202ENST00000334475 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
TREM1-202ENST00000334475 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
TREM1-202ENST00000334475 SETD1AO15047 1707 aaKnown RBP12.01□□□□□ -0.49
TREM1-202ENST00000334475 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
TREM1-202ENST00000334475 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
TREM1-202ENST00000334475 TXNDC2Q86VQ3 553 aa12.01□□□□□ -0.49
TREM1-202ENST00000334475 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
TREM1-202ENST00000334475 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
TREM1-202ENST00000334475 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
TREM1-202ENST00000334475 IDI1Q13907 227 aa11.98□□□□□ -0.49
TREM1-202ENST00000334475 CC2D1BQ5T0F9 858 aaKnown RBP11.98□□□□□ -0.49
TREM1-202ENST00000334475 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
TREM1-202ENST00000334475 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
TREM1-202ENST00000334475 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
TREM1-202ENST00000334475 NINLQ9Y2I6 1382 aa11.96□□□□□ -0.49
TREM1-202ENST00000334475 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
TREM1-202ENST00000334475 SLC26A8Q96RN1 970 aa11.96□□□□□ -0.49
TREM1-202ENST00000334475 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
TREM1-202ENST00000334475 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
TREM1-202ENST00000334475 PPP2R1AP30153 589 aa11.95□□□□□ -0.5
TREM1-202ENST00000334475 BCANQ96GW7 911 aa11.95□□□□□ -0.5
TREM1-202ENST00000334475 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
TREM1-202ENST00000334475 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
TREM1-202ENST00000334475 NSD2O96028 1365 aa11.93□□□□□ -0.5
TREM1-202ENST00000334475 ANKRD26Q9UPS8 1709 aa11.93□□□□□ -0.5
TREM1-202ENST00000334475 EVC2Q86UK5 1308 aa11.92□□□□□ -0.5
TREM1-202ENST00000334475 KCNA6P17658 529 aa11.92□□□□□ -0.5
TREM1-202ENST00000334475 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
TREM1-202ENST00000334475 LRP6O75581 1613 aa11.92□□□□□ -0.5
TREM1-202ENST00000334475 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
TREM1-202ENST00000334475 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
TREM1-202ENST00000334475 NWD1Q149M9 1564 aa11.91□□□□□ -0.5
TREM1-202ENST00000334475 POLR3AO14802 1390 aaPredicted RBP11.91□□□□□ -0.5
TREM1-202ENST00000334475 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
TREM1-202ENST00000334475 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
TREM1-202ENST00000334475 ANKRD36BQ8N2N9 1353 aa11.9□□□□□ -0.5
TREM1-202ENST00000334475 NSD3Q9BZ95 1437 aa11.89□□□□□ -0.51
TREM1-202ENST00000334475 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
TREM1-202ENST00000334475 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
TREM1-202ENST00000334475 ATAD2Q6PL18 1390 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms