RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 PRAM1Q96QH2 718 aa22.72■■□□□ 1.23
PDCD1-201ENST00000334409 TMF1P82094 1093 aa22.71■■□□□ 1.23
PDCD1-201ENST00000334409 POGKQ9P215 609 aa22.7■■□□□ 1.22
PDCD1-201ENST00000334409 ARHGEF28Q8N1W1 1705 aaKnown RBP22.69■■□□□ 1.22
PDCD1-201ENST00000334409 UBE2Q2Q8WVN8 375 aa22.69■■□□□ 1.22
PDCD1-201ENST00000334409 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
PDCD1-201ENST00000334409 LRPPRCP42704 1394 aaKnown RBP22.68■■□□□ 1.22
PDCD1-201ENST00000334409 TBX22Q9Y458 520 aa22.67■■□□□ 1.22
PDCD1-201ENST00000334409 MINK1Q8N4C8 1332 aaPredicted RBP22.67■■□□□ 1.22
PDCD1-201ENST00000334409 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
PDCD1-201ENST00000334409 MED14O60244 1454 aa22.66■■□□□ 1.22
PDCD1-201ENST00000334409 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
PDCD1-201ENST00000334409 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
PDCD1-201ENST00000334409 NBR1Q14596 966 aa22.64■■□□□ 1.22
PDCD1-201ENST00000334409 CCDC184Q52MB2 194 aa22.64■■□□□ 1.22
PDCD1-201ENST00000334409 AMOTL2Q9Y2J4 779 aa22.64■■□□□ 1.21
PDCD1-201ENST00000334409 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
PDCD1-201ENST00000334409 NPHP4O75161 1426 aaPredicted RBP22.62■■□□□ 1.21
PDCD1-201ENST00000334409 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
PDCD1-201ENST00000334409 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
PDCD1-201ENST00000334409 ANP32AP39687 249 aaKnown RBP22.61■■□□□ 1.21
PDCD1-201ENST00000334409 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
PDCD1-201ENST00000334409 MRS2Q9HD23 443 aa22.61■■□□□ 1.21
PDCD1-201ENST00000334409 IPO9Q96P70 1041 aaKnown RBP22.6■■□□□ 1.21
PDCD1-201ENST00000334409 ROBO2Q9HCK4 1378 aa22.6■■□□□ 1.21
PDCD1-201ENST00000334409 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
PDCD1-201ENST00000334409 CABP2Q9NPB3 220 aa22.58■■□□□ 1.2
PDCD1-201ENST00000334409 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
PDCD1-201ENST00000334409 KCNA6P17658 529 aa22.57■■□□□ 1.2
PDCD1-201ENST00000334409 SBNO2Q9Y2G9 1366 aa22.57■■□□□ 1.2
PDCD1-201ENST00000334409 RBM33Q96EV2 1170 aaKnown RBP22.57■■□□□ 1.2
PDCD1-201ENST00000334409 DLC1Q96QB1 1528 aa22.55■■□□□ 1.2
PDCD1-201ENST00000334409 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
PDCD1-201ENST00000334409 DIP2AQ14689 1571 aa22.55■■□□□ 1.2
PDCD1-201ENST00000334409 EVC2Q86UK5 1308 aa22.55■■□□□ 1.2
PDCD1-201ENST00000334409 SRPK2P78362 688 aaKnown RBP22.54■■□□□ 1.2
PDCD1-201ENST00000334409 USP35Q9P2H5 1018 aa22.54■■□□□ 1.2
PDCD1-201ENST00000334409 TULP4Q9NRJ4 1543 aa22.54■■□□□ 1.2
PDCD1-201ENST00000334409 TECPR2O15040 1411 aa22.54■■□□□ 1.2
PDCD1-201ENST00000334409 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
PDCD1-201ENST00000334409 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
PDCD1-201ENST00000334409 TMC1Q8TDI8 760 aa22.52■■□□□ 1.2
PDCD1-201ENST00000334409 CDK19Q9BWU1 502 aa22.52■■□□□ 1.2
PDCD1-201ENST00000334409 PANK3Q9H999 370 aa22.52■■□□□ 1.2
PDCD1-201ENST00000334409 KNDC1Q76NI1 1749 aa22.52■■□□□ 1.2
PDCD1-201ENST00000334409 SLC24A1O60721 1099 aa22.52■■□□□ 1.2
PDCD1-201ENST00000334409 CPS1P31327 1500 aa22.51■■□□□ 1.19
PDCD1-201ENST00000334409 SIRT1Q96EB6 747 aa22.5■■□□□ 1.19
PDCD1-201ENST00000334409 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
PDCD1-201ENST00000334409 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
PDCD1-201ENST00000334409 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
PDCD1-201ENST00000334409 B4GALNT3Q6L9W6 998 aa22.48■■□□□ 1.19
PDCD1-201ENST00000334409 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
PDCD1-201ENST00000334409 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
PDCD1-201ENST00000334409 STRCQ7RTU9 1775 aa22.46■■□□□ 1.19
PDCD1-201ENST00000334409 XRN1Q8IZH2 1706 aaKnown RBP22.46■■□□□ 1.19
PDCD1-201ENST00000334409 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.46■■□□□ 1.19
PDCD1-201ENST00000334409 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
PDCD1-201ENST00000334409 WASLO00401 505 aaPredicted RBP22.45■■□□□ 1.18
PDCD1-201ENST00000334409 MYOM1P52179 1685 aa22.44■■□□□ 1.18
PDCD1-201ENST00000334409 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
PDCD1-201ENST00000334409 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
PDCD1-201ENST00000334409 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
PDCD1-201ENST00000334409 PER1O15534 1290 aaPredicted RBP22.42■■□□□ 1.18
PDCD1-201ENST00000334409 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
PDCD1-201ENST00000334409 CARD14Q9BXL6 1004 aa22.39■■□□□ 1.18
PDCD1-201ENST00000334409 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.17
PDCD1-201ENST00000334409 PROSER2Q86WR7 435 aaPredicted RBP22.39■■□□□ 1.17
PDCD1-201ENST00000334409 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
PDCD1-201ENST00000334409 NUDT16Q96DE0 195 aaKnown RBP22.37■■□□□ 1.17
PDCD1-201ENST00000334409 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
PDCD1-201ENST00000334409 PRR36Q9H6K5 1346 aa22.37■■□□□ 1.17
PDCD1-201ENST00000334409 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
PDCD1-201ENST00000334409 ATAD2Q6PL18 1390 aa22.35■■□□□ 1.17
PDCD1-201ENST00000334409 STRCP1A6NGW2 1772 aa22.35■■□□□ 1.17
PDCD1-201ENST00000334409 KTN1Q86UP2 1357 aaKnown RBP22.34■■□□□ 1.17
PDCD1-201ENST00000334409 ZNF335Q9H4Z2 1342 aaPredicted RBP22.33■■□□□ 1.17
PDCD1-201ENST00000334409 PPM1GO15355 546 aaPredicted RBP22.33■■□□□ 1.16
PDCD1-201ENST00000334409 NUDCQ9Y266 331 aa22.33■■□□□ 1.16
PDCD1-201ENST00000334409 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
PDCD1-201ENST00000334409 NWD1Q149M9 1564 aa22.31■■□□□ 1.16
PDCD1-201ENST00000334409 CCDC61Q9Y6R9 512 aa22.31■■□□□ 1.16
PDCD1-201ENST00000334409 PPIP5K1Q6PFW1 1433 aa22.31■■□□□ 1.16
PDCD1-201ENST00000334409 ADGRB2O60241 1585 aa22.3■■□□□ 1.16
PDCD1-201ENST00000334409 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
PDCD1-201ENST00000334409 NALCNQ8IZF0 1738 aa22.3■■□□□ 1.16
PDCD1-201ENST00000334409 PNISRQ8TF01 805 aaKnown RBP22.3■■□□□ 1.16
PDCD1-201ENST00000334409 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
PDCD1-201ENST00000334409 AMER1Q5JTC6 1135 aaPredicted RBP22.29■■□□□ 1.16
PDCD1-201ENST00000334409 ATP7BP35670 1465 aa22.29■■□□□ 1.16
PDCD1-201ENST00000334409 PMFBP1Q8TBY8 1022 aa22.28■■□□□ 1.16
PDCD1-201ENST00000334409 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
PDCD1-201ENST00000334409 ANKRD36BQ8N2N9 1353 aa22.28■■□□□ 1.16
PDCD1-201ENST00000334409 CD163L1Q9NR16 1453 aa22.27■■□□□ 1.16
PDCD1-201ENST00000334409 RTN4Q9NQC3 1192 aaKnown RBP22.27■■□□□ 1.15
PDCD1-201ENST00000334409 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.15
PDCD1-201ENST00000334409 RGPD8O14715 1765 aaPredicted RBP22.26■■□□□ 1.15
PDCD1-201ENST00000334409 BRD4O60885 1362 aaPredicted RBP22.26■■□□□ 1.15
PDCD1-201ENST00000334409 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.26■■□□□ 1.15
PDCD1-201ENST00000334409 RALBP1Q15311 655 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms