RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ADGRF5Q8IZF2 1346 aa14.02□□□□□ -0.17
POLR1B-202ENST00000333990 BCL2L13Q9BXK5 485 aa14.01□□□□□ -0.17
POLR1B-202ENST00000333990 C9orf78Q9NZ63 289 aaPredicted RBP14.01□□□□□ -0.17
POLR1B-202ENST00000333990 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
POLR1B-202ENST00000333990 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
POLR1B-202ENST00000333990 C14orf93Q9H972 538 aaKnown RBP14.01□□□□□ -0.17
POLR1B-202ENST00000333990 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
POLR1B-202ENST00000333990 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
POLR1B-202ENST00000333990 PRKAR2BP31323 418 aa14□□□□□ -0.17
POLR1B-202ENST00000333990 NOS1P29475 1434 aa14□□□□□ -0.17
POLR1B-202ENST00000333990 FKBP5Q13451 457 aaPredicted RBP14□□□□□ -0.17
POLR1B-202ENST00000333990 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
POLR1B-202ENST00000333990 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
POLR1B-202ENST00000333990 MSH5O43196 834 aa13.99□□□□□ -0.17
POLR1B-202ENST00000333990 FRAT2O75474 233 aaPredicted RBP13.99□□□□□ -0.17
POLR1B-202ENST00000333990 TOM1L2Q6ZVM7 507 aa13.98□□□□□ -0.17
POLR1B-202ENST00000333990 STRN4Q9NRL3 753 aa13.98□□□□□ -0.17
POLR1B-202ENST00000333990 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
POLR1B-202ENST00000333990 WASLO00401 505 aaPredicted RBP13.98□□□□□ -0.17
POLR1B-202ENST00000333990 PHF8Q9UPP1 1060 aa13.98□□□□□ -0.17
POLR1B-202ENST00000333990 TRIM6-TRIM34B2RNG4 842 aa13.98□□□□□ -0.17
POLR1B-202ENST00000333990 RRP1P56182 461 aaKnown RBP13.98□□□□□ -0.17
POLR1B-202ENST00000333990 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
POLR1B-202ENST00000333990 NBR1Q14596 966 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 SCAF11Q99590 1463 aaKnown RBP13.97□□□□□ -0.17
POLR1B-202ENST00000333990 AAMPQ13685 434 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
POLR1B-202ENST00000333990 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 SPG7Q9UQ90 795 aa13.97□□□□□ -0.17
POLR1B-202ENST00000333990 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.17
POLR1B-202ENST00000333990 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
POLR1B-202ENST00000333990 LRRFIP1Q32MZ4 808 aaKnown RBP13.96□□□□□ -0.17
POLR1B-202ENST00000333990 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
POLR1B-202ENST00000333990 CENPQQ7L2Z9 268 aaPredicted RBP13.95□□□□□ -0.18
POLR1B-202ENST00000333990 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
POLR1B-202ENST00000333990 SAMD9Q5K651 1589 aa13.95□□□□□ -0.18
POLR1B-202ENST00000333990 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
POLR1B-202ENST00000333990 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
POLR1B-202ENST00000333990 COG6Q9Y2V7 657 aa13.94□□□□□ -0.18
POLR1B-202ENST00000333990 NEO1Q92859 1461 aa13.94□□□□□ -0.18
POLR1B-202ENST00000333990 PTPRKQ15262 1439 aa13.93□□□□□ -0.18
POLR1B-202ENST00000333990 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-202ENST00000333990 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-202ENST00000333990 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
POLR1B-202ENST00000333990 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
POLR1B-202ENST00000333990 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-202ENST00000333990 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-202ENST00000333990 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
POLR1B-202ENST00000333990 PIP4K2BP78356 416 aa13.93□□□□□ -0.18
POLR1B-202ENST00000333990 NECTIN2Q92692 538 aa13.93□□□□□ -0.18
POLR1B-202ENST00000333990 FCHSD2O94868 740 aa13.92□□□□□ -0.18
POLR1B-202ENST00000333990 RIC3Q7Z5B4 369 aa13.92□□□□□ -0.18
POLR1B-202ENST00000333990 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
POLR1B-202ENST00000333990 ATP10AO60312 1499 aa13.91□□□□□ -0.18
POLR1B-202ENST00000333990 FOXO3O43524 673 aa13.9□□□□□ -0.18
POLR1B-202ENST00000333990 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
POLR1B-202ENST00000333990 ANKRD45Q5TZF3 282 aa13.9□□□□□ -0.18
POLR1B-202ENST00000333990 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
POLR1B-202ENST00000333990 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.19
POLR1B-202ENST00000333990 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.19
POLR1B-202ENST00000333990 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 PLIN1O60240 522 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■□□□□ 10.7
POLR1B-202ENST00000333990 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
POLR1B-202ENST00000333990 NSD2O96028 1365 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 CABP4P57796 275 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
POLR1B-202ENST00000333990 MSH6P52701 1360 aa13.88□□□□□ -0.19
POLR1B-202ENST00000333990 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
POLR1B-202ENST00000333990 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
POLR1B-202ENST00000333990 GNAI3P08754 354 aa13.87□□□□□ -0.19
POLR1B-202ENST00000333990 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
POLR1B-202ENST00000333990 GNL2Q13823 731 aaKnown RBP13.87□□□□□ -0.19
POLR1B-202ENST00000333990 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
POLR1B-202ENST00000333990 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
POLR1B-202ENST00000333990 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
POLR1B-202ENST00000333990 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
POLR1B-202ENST00000333990 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
POLR1B-202ENST00000333990 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
POLR1B-202ENST00000333990 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
POLR1B-202ENST00000333990 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
POLR1B-202ENST00000333990 RUFY2Q8WXA3 655 aa13.86□□□□□ -0.19
POLR1B-202ENST00000333990 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
POLR1B-202ENST00000333990 CHMP4CQ96CF2 233 aa13.86□□□□□ -0.19
POLR1B-202ENST00000333990 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
POLR1B-202ENST00000333990 MFAP1P55081 439 aaKnown RBP13.85□□□□□ -0.19
POLR1B-202ENST00000333990 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
POLR1B-202ENST00000333990 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
POLR1B-202ENST00000333990 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
POLR1B-202ENST00000333990 KIF6Q6ZMV9 814 aa13.85□□□□□ -0.19
POLR1B-202ENST00000333990 NOL10Q9BSC4 688 aaKnown RBP13.85□□□□□ -0.19
POLR1B-202ENST00000333990 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
POLR1B-202ENST00000333990 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
POLR1B-202ENST00000333990 HTATSF1O43719 755 aaKnown RBP13.84□□□□□ -0.19
POLR1B-202ENST00000333990 TOM1O60784 492 aa13.84□□□□□ -0.19
POLR1B-202ENST00000333990 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
POLR1B-202ENST00000333990 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms